TCONS_00067877 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067877
Unique NameTCONS_00067877
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4099

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067877 ID=TCONS_00067877|Name=TCONS_00067877|organism=Clytia hemisphaerica|type=transcript|length=4099bp
aggaaatgaaaaaaaaaactactcagaaaagtcaaaaaaagaagaaaaaa
aattggatgaaATTGTTGACTTGTGTTGACCTTAGCAGCAATAATGCCAG
AGAACTCACATGGTGGGCATTTAAATGCACAGCTACCAACAAACTCTCAT
ATGTTCGAACCCTCATTTAATATTAATGCAAACGTACGACCCAATAACTT
GAATCCATCTAGCGTGAGTGACTTTGAAACAGAACAATATCAATCTACAC
AGCAACACCAAAATGGTTTCATACAGACGAATAGACAGAACTATGAAATT
GGAAATGATCAACCTTTTACAAACGCATCACTGGATAACGGATATCAGAA
TTGCATACATGAATTTGACTCTAATAGAAATGTATTTTCCAACCAACAag
agcaacaacaacaacagcaacaacaagaCTACACTATACAGTCAAATATG
CAACAAGATAATTACGGCACTAGTAATGAATACAACCAAATAAACTCATT
AGACCCGCAATTCACCGACCCACAATTCATTGCACAAACATTTGGCATCA
GTGGTAATGTAAATCACCAATCAAACACACAACAAAACTCATTCAACAAT
ATTAATAATCCCGATATGCAGAACTCGACTAATACTGAAAATTTAAACTG
TTTTTCCCATCAAACGAGCCATCAGATTGATAATCCCAATATGCAGAACT
CGACTAATACTGAAAATTTAAACTATTCTTCCCAACAAACGAGCCATCAG
ATTGATAATACCGATATGCAGAACTCGACTAATACTGAAAATTTAAACTA
TTTTTCCCAACAAACGAGCCACCCGATTGATAATCCTAATATGCAGAACT
CGACTAATACTGAAAATTTAAactatttttcccatcaaaCGAGCCACCAG
ATTGATAATACCGATATGCAGAACTCGACTAATGCTGAAAATTTAAACTG
TTATTCCCAACAAACGAGCCACCAGATTGATAATACCGATATGCAGAACT
CGACTAATACTGAAAATTTAAactatttttcccatcaaaCGAGCCACCAG
ATTGATAATCCCGATATGCAGAACTTGCCTAATACTGAAAATTCAAACTA
TTCTTCCCAACAAATTATCCAATACAAGGATAATATCTCTTCTCAAAACT
CCAGTCCAGGCTTTGAAgatattttggatattttggaTATGGAAACCAGC
GACGAATCAGAACAAACATCACCAGAACAGACCAATCACCTTTCACCTTC
AAAACCTCCGGACTTTACTATTGAAGAAGATGTCTTCCCTAGAAGTCCTG
TTAAGTCTCAGGTACGAAAAACAGTTGACAAGAACATAGACTCCCGTCAA
AAGCCCAAAGCAGAAAACGTTGTCCTAAATCTCGTCTTTGATGGGCCTCC
TCATGAATTGGATTGGGTGACAGAAATTAAAGTTTTTGTACACAATAACA
AAAGAAGTAAGAAAGCTCAAATTCATATCCTTCAAATTCATATTGAGCGA
ACAGACCGGATGAAAGTTGAACATAATAAGATAAAGCTGActtttgattt
aaataactTGGTCGAACCTGAAGACCAAATCTATGAGCTTACAACATCtc
gaaaaaaagattcaaaaaagtttcacttttcCATTGAAGTACACTACAAT
TGTTTTGAGAAGCCAAATATCAAAGAAACCAACTCTTTTACTCTCTTTGG
TTCcgaaaaagcaaagaaaaatgcaGaaaaaccaaaaaccaagaaaagaa
aagtaaatgAACCAATAGGTCAATGTATACCAAATCAGCATGAATTCGAT
AACTCACACCATTACGAAAGGCTCCCAGATGAGGAGCCAAATGACCACAT
AGGGAACGAAAAAACTGCTAATTTCGCCAAATTAATTGTCCAAGATTTGG
AAGCACAAAATCTACACGTCAAAGGAAGCCTTAATGTTGATGGAAAGGCT
GATatcggctaccattttgaattggGTGATGACGAAGAGGACTTCGAGGA
AGgaGAAGTGGTGGGTCTTGTACCAAGAGACAGCTCCATCAATGCAGATA
ACTTTGAAGAGTGCAACGAACAGCAACTGCGAGCTGTAAAATTGACCAAT
GAAACTGCAAAGAAAGCCGTTCTTAAAGGGGTTGTTACTGAAAGTCATTA
TATTGCTGCCAACAAGAAAGATCCTTCAAAACGGTCCATAGTTTTATGTA
TGATGGGAATAGTACCTGTTAAAGTCAAAGGATCTGTACGACCCAATGAA
ACACTTTATGCCGCCCCAAACCGCCCTGGACTAGCAATTAGTGGTTATCA
CTTAGAAGCGAGCGAACAAAAAGAAGTTAGCGTCATTGGTGTCACGTTTG
GATCACGGAAAACTTCCGATGAAAATTCTGTTGGTTTGGTTGAGGCAGGT
GTTTCAATCCTTCAGCAAGCTTCACACCATCTGGTGGACTCCAAATTTAG
ATTTGTGGATGATCAAATCAAGAATAccaaaaaatcaatgaaacGTAGAC
GAAGATTTCATTATGGTTGTTGTGCTGTCTTTATACTTCTTCTTGCTTTG
CTGTGTATCCTTTTTTGGCAGCTTTATTACCCTGGAACAGCTTATCGCCA
TTGGAAATGTAAACAGGGCCATACGAAGCCTTTACAACGTGCTCGCATTA
TCCGGTATAAATCAAAAAAGGACCAAACTGTGAGGATAACAGCTCACGGA
ATAAGATTCGAATTTAAAGACATCCTCCGTAAAATTGAATTATCAGAAGA
AGATTCTTTTCAAGAACCCATCAGCGGAATCGTTGATGGAGTTGATGTTG
GCGAAGCCAGATATTATCTTGGATTCTACCGGTGTGCGTATGGAGATAGC
TTTGCTTACAGAAAGACTTCAGGAGGGACACAATACACTGGACCAAGAAT
GTTTGCTATTGATGAGAAATGTGAAAATGCTTTTTGGCTGGGACCTGATA
GTTGGGTACGGTATGTGTCACCACAGGCAATACAATGTGATGAAAAGATA
CATTTTCCCTAGCTTGAAAATGGTCTAGTTTGATAGTTAtgtaaattttc
aatgtttttttgcGAGCTAGGTTGTAAGTAGATATCACAAGGCCTCTCAT
TGGATAATTCAATTTATTTGGTCAATATGAGTGATGTTTAACGGCGAAGC
ACTACTAGATGGGGCAGACGGGGCCGAAACAAAATTATGCATATACAACT
CACAGTTTGGTGCCAGTAATTTGTTTGATTCAGGAAATTCTCTCGTCTTC
CCCGCTTACACTGATATACTAGTTGTTTGATTTGATTGAATAAATTGTCG
ATCCACTGTCTTTTACTCTTTTGTAAAGATGGTGTGCGGTTTTGCTTTTA
CTTCGTCGGCTTGTGAAAGTTCCACTAGGTGGAGTGGTGGTTTTGTATAA
GATATCTGAGCACGATGCCAATTCCAATATTACCTCaagggaaagaaatt
ttggcggaaagaaatttNGAATTTGGTGAATTGTCTAAAAATTTcgccaa
atttgccaaatttaaatttataggtcgttcgccaaaattaattcacgcca
aatttataaatttattaaatcgccaaaataaattccgccaaattgcacca
aaattggcaaaaatttcttctcttaaggtagtATTCACCGAAGTGATTAG
TGAACTGAGTTCGAGTTTAACTTTCCATCTCCAATAATTTCCCGTATACT
TGTGTTTCAAAGAAAGCCCAAGctaatcaaatttcagaaaacactAAAAC
TTTTCCCACATCATATGACAACAATCAAATGACCAATGAATTTTAACAAC
CCAAAATCCTGAAAgacaaagacaaaagacaaaacaaaccaaatttcACT
AATTTTTAATAGATTaagtaaattttgtaaaaatatttttagtatatttt
ttaatAGTATTTGGATTTAAATATTCACAGttttatattcctttttttAC
TATTTATATTGTGTAGTACTCCAAATTTTAGAGGGAGTGATTTTGTAAAA
AACGGATAGAGGATAAAATATTATTAGGTATTATCAATGAAGCCTGTGGG
TGTTCTaatctaaactttttgagttttaagccaaagaatgttcttaacc
Run BLAST on NCBI

transcript from alignment at scaffold_477:101198..115136+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067877 ID=TCONS_00067877|Name=TCONS_00067877|organism=Clytia hemisphaerica|type=transcript|length=13939bp|location=Sequence derived from alignment at scaffold_477:101198..115136+ (Clytia hemisphaerica)
aggaaatgaaaaaaaaaactactcagaaaagtcaaaaaaagaagaaaaaa
aattggatgaaATTGTTGACTTGTGTTGACCTTAGCAGCAATAATGCCAG
AGAACTCACATGGTGGGCATTTAAATGCACAGCTACCAACAAACTCTCAT
ATGTTCGAACCCTCATTTAATATTAATGCAAACGTACGACCCAATAACTT
GAATCCATCTAGCGTGAGTGACTTTGAAACAGAACAATATCAATCTACAC
AGCAACACCAAAATGGTTTCATACAGACGAATAGACAGAACTATGAAATT
GGAAATGATCAACCTTTTACAAACGCATCACTGGATAACGGATATCAGAA
TTGCATACATGAATTTGACTCTAATAGAAATGTATTTTCCAACCAACAag
agcaacaacaacaacagcaacaacaagaCTACACTATACAGTCAAATATG
CAACAAGATAATTACGGCACTAGTAATGAATACAACCAAATAAACTCATT
AGACCCGCAATTCACCGACCCACAATTCATTGCACAAACATTTGGCATCA
GTGGTAATGTAAATCACCAATCAAACACACAACAAAACTCATTCAACAAT
ATTAATAATCCCGATATGCAGAACTCGACTAATACTGAAAATTTAAACTG
TTTTTCCCATCAAACGAGCCATCAGATTGATAATCCCAATATGCAGAACT
CGACTAATACTGAAAATTTAAACTATTCTTCCCAACAAACGAGCCATCAG
ATTGATAATACCGATATGCAGAACTCGACTAATACTGAAAATTTAAACTA
TTTTTCCCAACAAACGAGCCACCCGATTGATAATCCTAATATGCAGAACT
CGACTAATACTGAAAATTTAAactatttttcccatcaaaCGAGCCACCAG
ATTGATAATACCGATATGCAGAACTCGACTAATGCTGAAAATTTAAACTG
TTATTCCCAACAAACGAGCCACCAGATTGATAATACCGATATGCAGAACT
CGACTAATACTGAAAATTTAAactatttttcccatcaaaCGAGCCACCAG
ATTGATAATCCCGATATGCAGAACTTGCCTAATACTGAAAATTCAAACTA
TTCTTCCCAACAAATTATCCAATACAAGGATAATATCTCTTCTCAAAACT
CCAGTCCAGGCTTTGAAgatattttggatattttggaTATGGAAACCAGC
GACGAATCAGAACGTAAGAACAAAACATGGAATTTCAATACAAATGTTCC
ATAATCTAGCCCTGAGAGGGctgggggcactgaccttgacatCCGATGGG
GAcatgccgctggagtttgaaaagtggaccctgttaGATTTGAGTATATT
TCGGACCCGGTCTTTTCACCCGAAAAAGTGGTGAAAGTGACCAAGaagac
gaaaaattgaaatattttcttattccacccagaaaattgtccaaaatagc
TAAAAGTCAAACCTGTCAGATACActtcttgaaaattagtaaatttggga
ccttGCTAGAAATCTTACGTAAGGGCCTAAAATGAGACATTGACTAGTGG
CACGTCcccatacccaattttgccCAAGAGCCTCCCagaataaaaatgtt
ctcaacatgttcttagcatttcggccattgaagccttatgttcttatata
gtttattcttctaaaaaaacgtgtaaaagcttttgaatttgtatttaGAA
ACATCACCAGAACAGACCAATCACCTTTCACCTTCAAAACCTCCGGACTT
TACTATTGAAGAAGATGTCTTCCCTAGAAGTCCTGTTAAGTCTCAGGTAA
ACATTGGCAGATCTAAAGAGGGCttattaatgcaaatttatttttggacc
tTCAAAGTCCttctaagggtcgtaaaaatcacaACATCTAATTTCATTTC
GCCTTTAGGGAtacgaaaaaatcaaaaactctaaTATTTATCCTTAAATA
AAAAGGCTaaattcccggggggggggggNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccc
ccccggggctaaattttaggaaaaaagtCTCGGTAAGGgccctaaaattg
aaaaaaaattcggtttactaatttttttacaaatgcTTTTTTTTAGGTAC
GAAAAACAGTTGACAAGAACATAGACTCCCGTCAAAAGCCCAAAGCAGAA
AACGTTGTCCTAAATCTCGTCTTTGATGGGCCTCCTCATGAATTGGATTG
GGTGACAGAAATTAAAGTTTTTGTACACAATAACAAAAGAAGTAAGAAAG
CTCAAATTCATATCCTTCAAATTCATATTGAGCGAACAGACCGGATGAAA
GTTGAACATAATAAGGTATATATTTCATTTCATTAggttttctaatattt
ttttattcattatcttttgtaCAAGCAtgcacgctttttataagaacatc
taaaattatCTTAAGCTTGATGCTATATGTAGTGCTATAGCCTAAAAGTA
GAAATTTAAAGTTGTTCATGCttaaaagcccccccccccttaataaTTTG
ATATAATTTGCTCAGAATTTAATACCTTATTCGGTGGAAttaatcatttt
cgtttaattcgactttgaaaaatcttcaaatttttactCATTTCGTGGGC
TATAATGTCAgttttttggtcataaaaaaCTTTGCCAGGTCAAATTTGCA
CGCAGGCCCCCTcccaaaaaggttttgaaatcctatctactttcgaacca
atcacatgcCGTTGCGTCCCACGAAAGATGCTATGGATCCTAAAGGTTTG
ACTCTCTACTATTAAAGAATCATTCTACTGTTATATTTTCAGATAAAGCT
GActtttgatttaaataactTGGTCGAACCTGAAGACCAAATCTATGAGC
TTACAACATCtcgaaaaaaagattcaaaaaagtttcacttttcCATTGAA
GTACACTACAATTGTTTTGAGAAGCCAAATATCAAAGAAACCAACTCTTT
TACTCTCTTTGGTTCcgaaaaagcaaagaaaaatgcaGGTAATGTGGAGC
TAGTCTATCAGCATGCCTCTCTCCTCTAAGGTCCCAAATAAACGTCTCCC
CCAGGTTATTAATTTTCCCCGTTTTTATTAGGATCTTCTaatttttgatg
atattttcAGCTATCAAAAGCTAAATTGGTATGAATACCTCATCATGAGG
TTTTTAGAGGTACAATATCCTACACTCTCTCCCTTGGaaattcgggacct
tagagtcaAACCCTGATAATCAAATAGAGTCCATTGCAGTGCAAGTCGCG
CACTACCGATCGGCAGAATGTTAGAGAGGCACAGTGATAGCCTGATCCAG
ATGACGAATCAATGTATTGttaccgagtttatcgttctacatctgtcTTA
TTTTGGACATCTTTTTCGGAAATGTTTGAAGAGGCAATGTTTTTTGTGAA
AGTCAAGATATCGCAACCGTCAGCTCAATGCGTATCCCAgcttgcacaca
acgttgtttcaacgttcatctaacgttatatggacgttgtgaacacgAAA
TAAACGTCAAGACAAGTGTTTGCACCAGCTGgataaatgagaacttcaat
CAACAAATGGAGGAAAACTATGCAACAATTCGACTTTTGACAGtcttttc
atcgattttttttagaaaaaccaaaaaccaagaaaagaaaagtaaatgAA
CCAATAGGTAAACTGAATTAATTTCTACTTCAAACGATCCAATTATGAAC
TGGTAGAAAATAAGATACATTCTGACATTCTGATTGATGGGCTAGGCTTC
AATAAACAGCGAGGCTACATATTTTGCACTTATGGGGGCGGttgagtgac
tgaagcgatttgaacTGCTATATCTAGGATGGTAAAAGTGCTAATTTACT
gttgtcctcagtcagtcaggatgtatCCAAATTACTAGAACCTTACAGTC
TCCGTCgttgaaaaacacacatacataaaaatTCCATCCACGCAGGGTAT
GGACTTTTTTTATCCAAtagagatttttgaaaatgtgtggattaCTCTAG
GAGCTGAGTTGTGTCCCGTATGCACATTGGCGTATAGTcatattttcttt
tgatcatgaaagtatagtccttgaagagtcagaaaacgtgtgtggcgtta
tttgggtcaggctcaaatttccataatggcggattttaNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNtggcggattcaaaattttctttcgtcacatggggtcctaggctct
gctagcctaagaaaaatattttttgatcttaaaaccatgtatattatata
ccaatcgatcaatAATTTTATGCTGGttgagaaaaaggtcagaaccataG
TCTGAAAATATCGCTATAAAGAGATACGaggtactttcgttttctaagtt
ttgaaaacgaaagtacttcatagctcaagatagaaaaattttcagaccat
aatattcacctttttcttaatcagcatagaatttctgatcgattggtata
taatatacatggttttaagatcaaaaaatattttcttaaccTAGCAGAGC
CTAGGACCCCATGTgagtgacgaaagaaaattttgaatccgccattatgg
atttataaattcatgtagaaaaaacttttttcctgaACTTTATTATTTGG
AAGGTAGACAAGACCCTcgaaaaatttcaagtaaatcaagaaagccaatc
aaatgttacagccacgcaaatttggaaccaaaatagtctggagaccatac
tctgttacaaaaatatttctatcctgtcaaaatcccaacaacttcactga
aacacagagtatggaattattgactcaattcaaatcacttcaaatcacaa
aagatagaaaaaaccgttatcttttcaaaacaatttaaaagctcgcgcca
cttcttgaaacaatagagctgtttgacgtcatacttttgtttatcaaatc
ataacaataaaatattagccaatcaaattttgcgcTGATTCTTACATCTT
CAATAATTCCCGGCTACTATGTAAAAACTCTGATATTTTCTGCTCGAACT
AAATGCTATACCTCAAAACCACACGGACATTGTAgccgggtctcccagct
agaaccaaaagtaataattttaaaaaatcgaaatcgaaagtgcttcatat
ctttagatagcgaaattttcagaccatgattctgacctttttcttaatca
gcataaaatttgtgatcgattggtatataatatgtctatgtttgaagtca
aagaaaatttttttttcaagcaagagggctaaaaagggttgaaaatctaa
aatccgccattatggaaatttgagcctgatccaaataacgccacacacgt
tttctgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNaacgccacacacgttttctgactcttcaaggac
tatactttcatgatcaaaagaaaaaatgactatacgccgatgtgcatacg
ggacctaactcagctcCTAGAGTAGATACCCCCTATAGAAAATGGCAAAA
TGGCAAGAGTTACAaaaaaacccttggaaaaattctctcTTTCATACGTT
AaagtggacgaactaaaatcagtatTTTTATTCCTAAGGTTTATTATAAC
TTTATAACTTTTCACCCTTAGACCCCCTGAATAATCTGCTCGGATTTTCA
GTTTAAATTGTAATGACGTCTTGGCTGGGGTTTTCTTTCTTACACAAAGC
TTGATTGTGATATTTGTTATGTAATTTATAATATTATAGGTCAATGTATA
CCAAATCAGCATGAATTCGATAACTCACACCATTACGAAAGGCTCCCAGA
TGAGGAGCCAAATGACCACATAGGGAACGAAAAAACTGGTAAGTATTATa
atgattgatttgattttggtaatttcaaaaaaaagctgAAAGGTGTAAGG
AGATGTGGGGAAATGTTTTGTCTACACAGTTGCCTTCCTCTTTTTTGATC
TTAAAGGGACCCAAGAGTTCTTTTCTCAATGTCTTAGTTCCaattacaca
aaaaataataaaagaggTCAGCATTAGACCATATGTTCACACGCTACGAT
TCTGTTCCCTCCGAAATAAAATGAAACTATTCTATTGGTTGAATTGTAGT
TTTATTTCACATCTAACCACtaagaatggcttcatttcgtttcggagcga
aacggagcCTCTACATGCCAGCATGGTCTTAGGGAGGGTTGATTGTAATT
ATTCTCTACCTTCTACTTTGCGAATCTTTGACTCCTCTTAGATTTTCTTA
GATTTTACTTTGGACTTgcaaacccagctggcacacaacgttgtttcaac
gtttatctaacgctcACAACGTTAGATgcacgttgaaacaacattgtgcg
CCAGCTAGGAATGtagaaaaaaggtaccctgaccaaaTTCATATCAATAT
ACTGGTTTGTTTTGTCATTATTTAAACCTTTCCTTTAAATTAGCTAATTT
CGCCAAATTAATTGTCCAAGATTTGGAAGCACAAAATCTACACGTCAAAG
GAAGCCTTAATGTTGATGGAAAGGCTGATatcggctaccattttgaattg
gGTGATGACGAAGAGGACTTCGAGGAAGGTAAATTTTAAATACGCATGCG
CACATAttaaagtgaaataaaaattacGAAATTTCTAAACAATCTTTTTG
GATATAATAtacgttttataagaacagcgaggctcaaaatcgtcaaaaag
TACGAACAATTTAAGAGCAATGCTTCGAAATTTTGAAAGGTAGATGCCAA
AAAGGTGTGcagtgtttttgtttttggtcATAGCATTTTAACCAGTTGCT
GTATACTAAAAAGTTTGGTAcctttggaaagatattaaGTGCGCTCATAT
TCTCCACGCACTtatcagtttttgaaaattcgtccaagaaaatgaaaaaa
aaacgaaaaataaatttttgctacTTTTGGTAGAAAGGTGctacaaaaaa
gatttttagatcAATCGAAAGCTGTTTTGAGATTGACTTTATAATATTAA
GTCATTTCATAAAGACTTGATATGCTTAAGCTCATATACTTCCATctgaa
ttttttactttttcaggaGAAGTGGTGGGTCTTGTACCAAGAGACAGCTC
CATCAATGCAGATAACTTTGAAGAGTGCAACGAACAGCAACTGCGAGCTG
TAAAATTGACCAATGAAACTGCAAAGAAAGCCGTTCTTAAAGGGGTTGTT
ACTGAAAGTCATTATATTGCTGCCAACAAGAAAGATCGTACGTATTCTAA
CGTAGCCTGGAGCCTAAATGATTTGATCTTTCATACACTGATGGTGAAAT
GAATAGCATGGTTTAGCTACTTTATTGAATTTCCCAGCGTCAAATGTTAA
TGACAGTTGAAAAAACAGTCAATCAAATGCTGTTTTTCTTTCACCAGTca
gtcacactttcttagaaaaaGTTCCTAAACTTGTTTTAACTTTAATAATT
GATTACAGCGCTAAATTTGAATTTCCTATTGTGAATATATAATCTGCTTC
ACAgtccagctgacacacaacgttgtttcaacttTTAGCTTCAAAACGGT
CCATAGTTTTATGTATGATGGGAATAGTACCTGTTAAAGTCAAAGGATCT
GTACGACCCAATGAAACACTTTATGCCGCCCCAAACCGCCCTGGACTAGC
AATTAGTGGTTATCACTTAGAAGCGAGCGAACAAAAAGAAGTTAGCGTCA
TTGGTGTCACGTTTGGATCACGGAAAACTTCCGATGAAAATTCTGTAAGT
ATGGTCATACAATAATTNCCAGTcagtcacactttcttagaaaaaacaca
AGTTCCTAAACTTGTTTTAACTTTAGTAattgaggacagcgctaaatttg
AATTTCCTATTGTGAATATATAATCTTCTTCACagcccagctgacacaca
acgttgtttcaacttTTAGCTTCAAAACGGTCCATAGTTTTATGTATGAT
GGGAATAGTACCTGTTAAAGTCAAAGGATCTGTACGACCCAATGAAACAC
TTTATGCCGCCCCAAACCGCCCTGGACTAGCAATTAGTGGTTATCACTTA
GAAGCGAGCGAACAAAAAGAAGTTAGCGTCATTGGTGTCACGTTTGGATC
ACGGAAAACTTCCGATGAAAATTCTGTAAGTATGGTCATACAATAATTNG
AAGTTAGCGTCATTGGTGTCACGTTTGGATCACGGAAAACTTCCGATGAA
AATTCTGTAAGTATGGTGATACAATAATTATGGGTAATCAGAAGGTTTTC
GTACAAATAGTGGGgaaaacatcctccacattacccgatgatgggagaag
aaactctcgaaacgtagccaaacgtaaatctcgtgatccaagctacgata
aacttccaatatgaatatcactgggtcgatttagaagtctctttaactcg
aacctatACAACGAATCTACAATAGTATTCCTGTCATCCTGTGTAACTCT
GTGTTCCTCGTGTGGGTTCGATTAATATCCatgaaaatatttcctttcca
tCTTTGAATATCAATGTGATTGAGAGTAATGAGACATGAACGATAATTTT
TTACAGTTTGTCTCCACACCTTAATATCACAGAAAGCTAAACTGCGAGTT
TTGAgttcttaagattttctttatttttaccattttgtgagtattttatc
gatttttctaagaaaataggtgttttagggtccgcaaagccttaaaatgt
tcttaacttgttcttaacattttggccatcgaagccttatgttcttatat
agtttgttcttataaagaaatgtgCACGTGATGAAAAGCTTTTGTTCCCA
TCATCTTTGAAGAAATCTTTTGGGCAAAGACTCCTTGAAAAGAGAGTAAC
GCCTCGATACCAATATCACATTTAttatgaagaaattttttgatttcttc
tcAGGTTGGTTTGGTTGAGGCAGGTGTTTCAATCCTTCAGCAAGCTTCAC
ACCATCTGGTGGACTCCAAATTTAGATTTGTGGATGATCAAATCAAGAAT
AccaaaaaatcaatgaaacGTAGACGAAGATGTGAGAAATATTCATGATA
TCtttctgttcctctaaagaatcctgaattataacacgcatgcgtaattt
gtcgttcttttaaccatatgtacaatcatggtcgaaatttattgagaatt
aagcttggttcttcatttttcgaaatttggagttcgcgcgaaaaactcaa
ttttgggccatctctcaaATGTAATCGGATATTTCAGGTTTATAGACCTC
TAGCCTATATTATGAGCCTATTTGGATCATTTTTGatcttttggatcctc
agatcctaaggtccaaAGTCTTAATTCTCATGTTAAAGCTCagggttaaa
actctacccttccaacctacttaatagcacttacaaatcgattgtggttt
caaaacttcccgatgaatttcccttttttctcaaatataacGACCATGAA
TGTAGTTAATGATTCTGTTTTTCTACACTCAACTGGTACcactggtacac
aacgttgtttcaacgtctatataataacgttagaaaaacgcTCAATTAAC
GTAATGTGTCAGCTGGGCATCAAGTCAGctatttattttaaagattgtgT
GTGGACGATGAGTCTCAAAACAAAATACCTTAAAAAAATGGTTCAGCTAA
ATTGCCATAATTATATTCTTTTCCAGTTCATTATGGTTGTTGTGCTGTCT
TTATACTTCTTCTTGCTTTGCTGTGTATCCTTTTTTGGCAGCTTTATTAC
CCTGGAACAGCTTATCGCCATTGGAAATGTAAACAGGGCCATACGAAGCC
TTTACAACGTGCTCGCATTATCCGGTATAAATCAAAAAAGGACCAAACTG
TGGTAAGAAGTCTtagaccacgttcacacgctacgTTTCCCTTTCaatcc
gaaacgaaatgaagccatttcaTTGGTCGAATTCAAATTTTACGTCattt
ttaaccaatagaatgacttGACTTGaattcgtttcggagcgaaatgGAAC
CGCTACGTGCGAACATAGTCTTAGCTGGGTTGGGTTGATGTGAATTCTTT
TCCCGTCGACGAACGAAGAACTATGCCAGCGGTTGaatatctttaaaact
tttACTTTCGATTTTCCGGAGGCCGTCTTACAGGTCTTCAGCCGTTAGAG
ACTGGCCGAAAATTATATctgtaggtcttcggccgccgACGTAGGTCTTC
GTCTGttgacagaaaaaaaaatccgTTGATAGGGCGTAGGGTTACAGTTT
ATTCTAAGaatattttgtagattttctttCTTAATTTTGAGAATCAGGTC
CTGCGGACCATGGTGGCTGGTATGGTGGCTGTTGTGTATTTTTGAGAAGG
GCTGTAAATTTCGAAAGCAACTGTATCAGAAACTATTCGAAGCTTTCATC
TCGCCAAATATAATTTTGACTGCCTCCATCTCCTTATAAAACCATGCTTT
TGTTTCCTTTTGGATTTAACTCTGGTGCGTGAAGCTTACCATTCTTTGAG
TTTCTGAGGACTTAGATAAATCTAAGCCAAAGTTTGGTCTTTAGAAAGAC
TAATttagacacccccttctcacttACCCACTgagaacccttcccactgg
aagtaatggcaaaaatatcgtcccaCTTACGATAACActataatttttgt
ccccactgaaaataatcagataagcaaattctcactgcaaattattgtgc
tattttttccatccctacTGAATTCTCTGGtcagaaaacaatggaattca
aatccccagccataagaacacataggaatatcaatccccatcgaggtTTG
GTCCGCtatttatccccactggctgctaaaatcccactgggtctgtgaga
aggtggTATATTTAGGACATCATAATGTTTTGTTATGACTCTTgatgata
aagaaaaaatacacgctcgtattcatgatattcatgacgtaatgttttct
acggaaagaccccagtTTTAGCATgcagtggcaaatttaaacttgacaaa
aattgtataaaatttgctactactggcaaaaaccggggtttttccgtaga
aaacattacgtcatgagtATCATgtattaacaaaataataaatttcaGAG
GATAACAGCTCACGGAATAAGATTCGAATTTAAAGACATCCTCCGTAAAA
TTGAATTATCAGAAGAAGATTCTTTTCAAGAACCCATCAGCGGAATCGTT
GATGGAGTTGATGTTGGCGGTAAGTttttttaaggccggtctcaactttc
gcgcgaaatgggcgacagtttttttcttgaccttttttgccagaaaaaaa
gattacgtcataaaagagtttcgcgcgaacaaaaaaaagttgaaggaagt
tctacttttttcatccgatacgtcaattttgaccataatggtattgcttc
atttttcaaccgaccaatgaccttacaaagtttttttcgctcatgtcgct
cgaaagtggagaccggcctttacatTCCCTTTCTTTAAACCGCTAAGATT
TCTGACTCATTGAACCCCAATAATGAACAATAAAGTTTTAGCAAAACCCA
CATTTTGAACAAAATAGTTGCTTGGATTTTTTTGAACTCGCTTTCAAATT
TCACAGTGAACTTCAATAAAttctaaattcttatttcttataGAAGCCAG
ATATTATCTTGGATTCTACCGGTGTGCGTATGGAGATAGCTTTGCTTACA
GAAAGACTTCAGGAGGGACACAATACACTGGACCAAGAATGTTTGCTATT
GATGAGAAATGTGAAAATGCTTTTTGGCTGGGACCTGATAGTTGGGTACG
GTATGTGTCACCACAGGCAATACAATGTGATGAAAAGATACATTTTCCCT
AGCTTGAAAATGGTCTAGTTTGATAGTTAtgtaaattttcaatgtttttt
tgcGAGCTAGGTTGTAAGTAGATATCACAAGGCCTCTCATTGGATAATTC
AATTTATTTGGTCAATATGAGTGATGTTTAACGGCGAAGCACTACTAGAT
GGGGCAGACGGGGCCGAAACAAAATTATGCATATACAACTCACAGTTTGG
TGCCAGTAATTTGTTTGATTCAGGAAATTCTCTCGTCTTCCCCGCTTACA
CTGATATACTAGTTGTTTGATTTGATTGAATAAATTGTCGATCCACTGTC
TTTTACTCTTTTGTAAAGATGGTGTGCGGTTTTGCTTTTACTTCGTCGGC
TTGTGAAAGTTCCACTAGGTGGAGTGGTGGTTTTGTATAAGATATCTGAG
CACGATGCCAATTCCAATATTACCTCaagggaaagaaattttggcggaaa
gaaatttNGAATTTGGTGAATTGTCTAAAAATTTcgccaaatttgccaaa
tttaaatttataggtcgttcgccaaaattaattcacgccaaatttataaa
tttattaaatcgccaaaataaattccgccaaattgcaccaaaattggcaa
aaatttcttctcttaaggtagtATTCACCGAAGTGATTAGTGAACTGAGT
TCGAGTTTAACTTTCCATCTCCAATAATTTCCCGTATACTTGTGTTTCAA
AGAAAGCCCAAGctaatcaaatttcagaaaacactAAAACTTTTCCCACA
TCATATGACAACAATCAAATGACCAATGAATTTTAACAACCCAAAATCCT
GAAAgacaaagacaaaagacaaaacaaaccaaatttcACTAATTTTTAAT
AGATTaagtaaattttgtaaaaatatttttagtatattttttaatAGTAT
TTGGATTTAAATATTCACAGttttatattcctttttttACTATTTATATT
GTGTAGTACTCCAAATTTTAGAGGGAGTGATTTTGTAAAAAACGGATAGA
GGATAAAATATTATTAGGTATTATCAATGAAGCCTGTGGGTGTTCTaatc
taaactttttgagttttaagccaaagaatgttcttaacc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042394XLOC_042394Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067877-exon-scaffold_477-1491911889:101198..102410TCONS_00067877-exon-scaffold_477-1491911889:101198..102410Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:101198..102410TCONS_00067877-exon-scaffold_477-1510915933:101198..102410Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:101198..102410TCONS_00067877-exon-scaffold_477-1575043694:101198..102410Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:102896..102993TCONS_00067877-exon-scaffold_477-1491911889:102896..102993Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:102896..102993TCONS_00067877-exon-scaffold_477-1510915933:102896..102993Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:102896..102993TCONS_00067877-exon-scaffold_477-1575043694:102896..102993Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:103644..103862TCONS_00067877-exon-scaffold_477-1491911889:103644..103862Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:103644..103862TCONS_00067877-exon-scaffold_477-1510915933:103644..103862Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:103644..103862TCONS_00067877-exon-scaffold_477-1575043694:103644..103862Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:104340..104535TCONS_00067877-exon-scaffold_477-1491911889:104340..104535Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:104340..104535TCONS_00067877-exon-scaffold_477-1510915933:104340..104535Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:104340..104535TCONS_00067877-exon-scaffold_477-1575043694:104340..104535Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:105163..105204TCONS_00067877-exon-scaffold_477-1491911889:105163..105204Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:105163..105204TCONS_00067877-exon-scaffold_477-1510915933:105163..105204Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:105163..105204TCONS_00067877-exon-scaffold_477-1575043694:105163..105204Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:107937..108035TCONS_00067877-exon-scaffold_477-1491911889:107937..108035Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:107937..108035TCONS_00067877-exon-scaffold_477-1510915933:107937..108035Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:107937..108035TCONS_00067877-exon-scaffold_477-1575043694:107937..108035Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:108641..108775TCONS_00067877-exon-scaffold_477-1491911889:108641..108775Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:108641..108775TCONS_00067877-exon-scaffold_477-1510915933:108641..108775Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:108641..108775TCONS_00067877-exon-scaffold_477-1575043694:108641..108775Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:109264..109434TCONS_00067877-exon-scaffold_477-1491911889:109264..109434Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:109264..109434TCONS_00067877-exon-scaffold_477-1510915933:109264..109434Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:109264..109434TCONS_00067877-exon-scaffold_477-1575043694:109264..109434Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:110117..110322TCONS_00067877-exon-scaffold_477-1491911889:110117..110322Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:110117..110322TCONS_00067877-exon-scaffold_477-1510915933:110117..110322Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:110117..110322TCONS_00067877-exon-scaffold_477-1575043694:110117..110322Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:111102..111228TCONS_00067877-exon-scaffold_477-1491911889:111102..111228Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:111102..111228TCONS_00067877-exon-scaffold_477-1510915933:111102..111228Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:111102..111228TCONS_00067877-exon-scaffold_477-1575043694:111102..111228Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:111874..112049TCONS_00067877-exon-scaffold_477-1491911889:111874..112049Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:111874..112049TCONS_00067877-exon-scaffold_477-1510915933:111874..112049Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:111874..112049TCONS_00067877-exon-scaffold_477-1575043694:111874..112049Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:113296..113416TCONS_00067877-exon-scaffold_477-1491911889:113296..113416Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:113296..113416TCONS_00067877-exon-scaffold_477-1510915933:113296..113416Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:113296..113416TCONS_00067877-exon-scaffold_477-1575043694:113296..113416Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1491911889:113841..115136TCONS_00067877-exon-scaffold_477-1491911889:113841..115136Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1510915933:113841..115136TCONS_00067877-exon-scaffold_477-1510915933:113841..115136Clytia hemisphaericaexon
TCONS_00067877-exon-scaffold_477-1575043694:113841..115136TCONS_00067877-exon-scaffold_477-1575043694:113841..115136Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:101198..115136 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.450008	0.483622	1.1922	1.1031	1.22335	0.769648	1.27604	1.24745	1.97433	2.56451	1.64042	1.48635	5.02502	2.60546	3.99183	4.96406	3.30721	3.40734	5.27965	4.70587	1.32864	1.37581	5.00327	6.43363	9.205	6.52083	8.34719	8.30647	4.67296	2.96647
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067877 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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