TCONS_00067869 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067869
Unique NameTCONS_00067869
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1929

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067869 ID=TCONS_00067869|Name=TCONS_00067869|organism=Clytia hemisphaerica|type=transcript|length=1929bp
ATTCAAGTTGGTCGTATCCGATCGATTTATAGGAATTTGATTGACATCAA
ATCGATCATTGAACTAATTCGATCTTTGAAGACATTTTTATGTTAAGTGT
TTTCCCATTTCTTCTTATATCTTTACAGAAAAgacgTTGCAGTGAAAGGC
TTGATAGCAGAAGATATCCGAGTGAAACTCCTTCAAATTGAGAAGCAGTT
TCTTGGTCAAGTCATACAAACATGTCATGGAGATATTGCGTATCATTTCA
CGCTCAATAATCAAAAGGAGGAATTCCAGGAAGGTGAGGTTATTGGATTT
TTCGGTCAAGACAGCAAGCAAACAGTAGAAaagctgacgtcagcaaattg
CAAAGATGTCAAGCTACAAGGGGTGGTTACTCGATCGCAATACTTTGAAG
GGATGAAACCGCGAAATGCAGATACCTCAACAGAAACAATATGTTTGATG
GGTGTGGTTCCAGTCAAAGTGATTGGTAAAGTTCAACCACGTGATGCTCT
TTACTCGTGCCCAGACCACCCTGGTGTCGCAATCAGCCAATCAGAGTTGA
GTAATGACGATACAGAGAAATCGAAGTATGCTTTTGTCGGAATGGCTTTT
GAAGGGAAACCTTTAAATGATACTAAAACTATTTGTTTTGTGATGACGAT
TATATCGATGAACCAATCGATAACTCAGCGAATGTTCAACGAACGATTGG
AATCGATGAATGCACAATATCATCAACGAATCGAACACGTTAAGAAAAGT
GGGAAAAACTTCCGAAAAAGGTGTCTCTGTATCTCAATCTTGGTGACATT
GATTCTACTACTGGTCAGTATCTTCATGTGGCAGTACTTCTTCCCTGGAT
CGAAATTCCGCTACTGGAAATGCAGCCTTGGTCGTGCGGAGCCGACGGGT
GATGTATCCTTCCGCTTTGTATCATTCAAAGATCTAAGTAAGTACGTATC
CGTGCATGGCATAAGATTCGAATATTTCGAACTGTTAGATAAAATGGATC
TGCAACATTACGAGCCACTTAATCTAAATGATACATCTACTAGATATTAC
CTGAACATTGATCGTTGTGCGCATGGTGGTATCCGACGGACTCCTGACAC
ATCGCGCGGTCTGAAAGTGGTAGCGGGTCCAAATATCTTTGCGGTAGACG
GGGGTTGCAGATATGTTTATTTCTTCAACGACAATTTgggaaaatggaga
aaatatttGACGGCAGACGTTTTGAAATGCAACCACGGTGACTGAaacaa
ctttggaaatataaGTATTTTCATTATCATTAACTTTTGACTATCGAGAG
CCGCTAAAATGCCTCAACTTTCGTTTGATTTGAAGACCCTGTAAATATAA
TACTATAACAGGTTTTGCATTGTTCACGCTGCGAACCTCAACTTCCATAT
ACGGTATTAACAAACCTTTAGAAAACTGTGGAAAGTGCTGGgctatatat
gtgaagaaacaAGAATTTCTGttcaactatattcactcagaaGATTtcgg
tggcagagcagcatatgcattttgTCCTTATATATAATACACTTTCGTGA
TATAATGGTCAGTACGGAGTGATTCTGATGTATTAGTACATCCCTAGAAT
CACTCTTCTTACCGTTACGGCTTTCCTACTAATATTAGCCAACTGGATCG
CAAAAGTCTGTTCTAGTGAATAAAAATAGGATATCTGTGATCGacattag
cctatttcatagaaTTCGTGTTTTGagtaaattatatttttctacgTTAC
TGCATTAGTGatcaactttttattttcagtacTGTTACTCCTTTATGAAT
TGAAATTAAAGGTTTTGCAAAGGCCACACTGGGCCCAGAggacaaaagtt
tggaaataggGAGTGGGAGAACAACAAGATAgtatttcttacattttttg
taTTATTAAGGCATTAGTAGAGCTCTAGG
Run BLAST on NCBI

transcript from alignment at scaffold_477:75473..89973+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067869 ID=TCONS_00067869|Name=TCONS_00067869|organism=Clytia hemisphaerica|type=transcript|length=14501bp|location=Sequence derived from alignment at scaffold_477:75473..89973+ (Clytia hemisphaerica)
ATTCAAGTTGGTCGTATCCGATCGATTTATAGGAATTTGATTGACATCAA
ATCGATCATTGAACTAATTCGATCTTTGAAGACATTTTTATGTTAAGTGT
TTTCCCATTTCTTCTTATATCTTTACAGAAAAggtatcttacattttttt
tgtgttttctgTTTATGACGTAGCTTTTCTGCGGGAAAATTCTCGAAATT
CCATCTTTGTATTTATGTTTAACTTAGATCACTATATCGAAATGAGTTAG
CAGTAGTAAAAGTAGCTTGACAGGAGATATATTTTGCAGGACTTAATTTA
GTtcgagttttttgaagtttttttttttagcaatATTACACCTACTTACT
TTCAAGGTTCTCTTTTGGACCTTTCCCGGTaatatttttcatagaaaagt
cGTTGGATACCTTAAATTGGGAATAGcactggaaaaatagaaaaattgct
GATTCCCATTCGCACATTGATGAAGGTCCAAAGGGATTTAGATCGGAAAA
AAACAATAAGCCCCCCTCTATAACTTGCAACCAGCCATTGCAGTACCCAG
TTCATCAATCTCTACAATCAGTGAGAAAATACTTGGCAcgaaagggaaat
tcaccgggaagttttgaaaccacaatcgatttgtaagtgctctaaagtag
gtttgaagggtagagttttaactctgagttttaacgctagacttaagact
agACTTtaagatctgaggatccaaaagctcaaaaatagtccagtaggctt
gaaatatagcctagaaaccaacaAATCCCttccagatcgaaataatcgat
gaaatcaagttgaaggcctgaaattgacattctcgctcgaacttcaattt
tcgaaaaatggtaaattagccaaaagtaccaatatgttatggcactgatt
gtagctcTGTTTCCCCATCCATTTCAAAATAATATCAAGACATGTGCGTT
TTCTCGAGCGCTTCGGAAAACTAGGACTCCAGAGTAACATCTACACCTGC
AGACATTTAAGACGCTTGTAACGGACAGCGTTAGGGATTTTGGAAAGATG
AAAAACTCTTTTTCCTATTCTCCGAGTATACCTTCTATATCCCACTACAC
TTTACCACACTCTGCAAACTAGAATCCAGTCCCTTAGTACACTTTGTATG
ATTTTGATAACGCTCTCGAAAGAGTCACGATTGTATCAAGTCtatttgga
aaatcaaaaagtggtgcaaTAGTGGCTCTGGGTGATTGTGTacttaaaat
atatattttaaacaCTTGCTCTACTttaggtcagatctctgatcttcacc
atacatatttttttcttttagacgTTGCAGTGAAAGGCTTGATAGCAGAA
GATATCCGAGTGAAACTCCTTCAAATTGAGAAGCAGTTTCTTGGTCAAGT
CATACAAACATGTCATGGAGATATTGCGTATCATTTCACGCTCAATAATC
AAAAGGTaatcttttgaattttatttttttggaatttcaagcCCATTCAA
GgtcaaatattttcatgtctCACGTATGTTTCATTGTTCGAGAAATTTTG
TCGCAAAAATACTTTGGTCGGGTagaaaaatcgagaaaaacttTGTCGTT
TTTGTGGGAATCATTTTTGTCACCCCATTGAAGTTaaccagaaaaatttt
ttatcgGGAGATAATGCTGTCTCGTCACTTCTCTCCGGTTAATTTTTCCC
CTTTAGGCAAATTTCAAGGGTTTTGAGCTGCTaccgtttttatttcaaag
attgaGTTTGAATTCAGttcgaaaaacaaaattatcGACCCAGGCTCTGT
TTAATTAGTTGCGAActattaaaacacaaagaatccACCTCAGAATGGGT
TTTTTTGTTAATATGGGGCCTAggacatcaaatttttgtcaTGATTCTCA
TGGCTCATGTACAAAAATtaggattgagtttcaaaattcaagcaaAGATT
GAGTTTCGGCCACTGTTATCTGGTAGCAGAAAAGGCCTGGAAAGTTGCCT
TCCCTTGGATGTAGTATCTGAACGGTTACAGATAAAAACCTTTGGTCTCT
TGAACTTAAataaggtgggagtcacatgaagttttgagatttggtgaaaa
aattatcgatttcgGGATTTTGCGCGTTTTATGACCCTATACCCTTTCTG
AACAcactctgaaaattttaaggccgtAGCACTTATATTTCCTGAGATAT
AAGCTTTTTTCTAGACCCTGATCTAAAGTATTCTCCTTAGcaacgaaaaa
tcatacccgttgctagggcccaatttctttatggctgatctaaacatagg
atcatgacataccaaacgaaagatctttttacgcccttttcgggcgtcta
aatcaataccgcctttttttcgcgggatttcctaatatgacgtaatcaaa
gatggtaaccaaagaagtgatattttaaaaaacatacaaattttGGAGGC
TGTCAGCCAGTCAGCAGTGTTTTTGACTATGAAAACTGCTTTAATTTGTA
AAATGTTGGATTGACTGATGACATTTTAGCTCTTTAATGTCATTCTTCTC
AACTAAGAAAGCTTGAGCTAGGTGAAACCAAAGACTTGATTCTCAAACTC
AAAGTTTTCGATATGAACTTAGTTTGACGACACCGAAAAACTTACTGAAG
GACGAAGACCAAAGGcatattcaatgatgtatctatttaaagATCCAAGT
TTCAAAGGAATTGAAAGCCTGGAGGCTGGTTTAACAGTTGCGTGTGATGA
ATTATTGAAGGTCTAGGGCGCTCCCACCGCCCCTATGGCTGGATTATTTA
CATCATTCACGAAGAAATCGTGCACGGCTAGATGTCCAAGTGGATTCTTG
TATCACAACAGATTAACTTTAGATTAACCTATAACTGACAAAATCAGTGA
GGAAAATATACTAGGATGAtctattacattgaaaatatggtttttgttgt
gaaaacacatttaaattgacttaaatcaatgttgacgtggagtttggcgc
aaaattttaaggattggcGCACATCATGTGAAAGtgataatttggaattt
ctggactattttgatatttcaaagccTTTTCTAAAGTATATAAAGTAGAA
CTATAGTCCATTTTAGTCAAACAgagaaagaattttgtaaaacggtcgaT
TTATTACAGAGAAATAGAGATATATATCTACTTTTGACTTTACGGAccgt
tttctcaaaataggtttcagggggttttcgcacaccttggcaacgttttc
tcaggattgacaagtgctatgaacttgaaattttcaggagaaatTCAATT
TATGGTCTAGAGTGTTATGAATggattacatttttgaaaaaatacttttt
tgattcctaaattcaaaaaatgcattttttaatttccagaccccctggaa
tgaaatttcaaaaaaaaattccattcatAACACTCCTTATCCAAATATTA
ACaagctgcaaaaaaaatttttgtgataggttttgtagatttttctaaaa
cgttgACACGATATTTTCACAGTAcattaccccctggctgattttacccc
cgtcttggttatttttagatttttttttacattttacaaagCATCTATTG
TTAAGTTTCCTctgtagaaaatttcatttaaaaatctcttcaagttcaaa
agttatacagaaaaatgtaaaaaatcaactttctcaatttttcatgtgac
tcccaccaAAACATCTAAGGAAGATTTTTACTCCAATCCtctaatttctt
ataaaaaaacaacctgTCATGCTTGTGATTACTCCTGTCATCCTTttcag
tggcgtggtgggaaaatttctctgggggGGGCCAAGGCAAAcatggcgcc
ctttttaaagattttttgtttttggcgcccctcatttttgggcgcccctt
ctcaaaagggctccgATGGGGGGGGCTGGCCCcctggccccccccccccc
ccccccgccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNATTTTTTGAAATATACTAGTAAGgcatttcaattgt
tttcaaatctttaaatgttctcataaaaagttTGCTAAAAATTTGCGACA
AATTTTATCCAACTTCGTTATTTTTTTGTAGGAGGAATTCCAGGAAGGTG
AGGTTATTGGATTTTTCGGTCAAGACAGCAAGCAAACAGTAGAAaagctg
acgtcagcaaattgCAAAGATGTCAAGCTACAAGGGGTGGTTACTCGATC
GCAATACTTTGAAGGGATGAAACCGCGAAATGCAGATAGTAAGTAGAATG
AAATTTCCCTCGTTTTTAATAGGTCTCAGATCTTTAACATGGGATTTTAA
TCTCTTAGATAAGGCGAGACCGATTTGATTAGTTGTTGACCCAAGCGACC
CTAAAATTCCAAACatcgaaatgaaaataaaatttattttgatagtacat
ttttattttcattgctttgcagactgccaaattttcaaaattctagtttt
atttttatatttttgccgACTGACCGACCACGTAGCTTGGCCCAGGGTGA
ATAATACTTTTTTCAATCAAGTATATTTAGCTATAGATTGCTGTGCTGTT
AGGCTACGTCATACCGTCCTTCGTTTTTAGCTTAAAACGGTCTATTGTGT
TGACTCGATTGCTGTTCGATCAATTTTACCCACGAGTAAGGGAAAATTAT
TATGACCAGGTTAGCTTCGAGAAGGACTTGAGCTTTTCTAAGAAAGGTAC
TGTGGGTAGTTAATCTCATTTGAGATGTtaagaaattttagaaatgttGG
AATAAGACTCATTTTAAAATCTGATATCGTGCCAAATTTATGTAAAAGAT
GTGTGGGTGTTGCTTTTTATTGGTATTTTGAGAAAACtgcaaatttttag
attttatcttTCATTTCAAGTATTAGCCCACacaatttatttctttttcg
tATTTTATTGACTATTGACAGAAAATCCAACTCCTTTTTATGGCGTAGGT
TTTACACCCACATCCCTACACTTTAACTAGAaacactttcttttgtttta
tacaACCCCTTCTCTTAAAACGAAacccctaaaaatgacattcagCAAAC
ATATTGCAGACTTTCGATGATTTTTGTTACTGATTTTACCGCGACGTGTT
TTTAATATATTAGAAAGAAACACCCATACTTATCGGTTTaattttaaagg
gataatcagatgttTTGAGATAGTTGGCCTGCAGAAAGCTTATGTGGGCT
TGAGTAAAACCTCCAAGTATGTTTGGGTAACTATTTTCcaacttttcaaa
tttctgaaaatgggttCTCACACGGTTCTTatgttgaaattctatttttt
tcttaCTAGGGCTTGTAATTTAAATGTCTCAACTTTGGAAAATctttagg
caaaaatattttgaggttttgctcaggacaatagaaagattacacatgcc
aaatatctcaaaccatatgattatccctttaacctTGGTATTGCTACGAC
ATCTTGGTTTTATCTAAACTGAATTCCATGACAAAAACAATAagtatttg
aatatattttcgcgaGGAGGTCTATTGCTTAGTCCCTTTAAAAACTTGAC
ATATAATAGAAAAATACTCAATGGCTATCGCCAAAAGAATTGCGAGTAGG
AAATTTCAGAGAGACCAATTGGATCAACTGATCTTTCCAATTAAGGTGTT
TTTTTCCCCAGAACTGAGGAGATGAAGTAACCTCTCTAACACATTTCCAA
TCCGCTCAGAGTTTTCTTTTCAGTGATCTAGCTtagaggttttattttta
cacaagtgttcccgtttcatatcagacacatatttcatgtcgggacagtg
tctgcctattgttatattatgctgaaataagcaaaacaatgtttttcttt
tcctctctctggccaatcttgctccacatccgtgtcaatctaacgtgaaa
aagcttgcgaattgaaattgatgagtaagcaaacgatatcactcttattt
aaaaacaaaacctttaacggAAGTAAGGATCTTTTGAATTCATGAAAACC
TATCAATATTTATCTTACATACAGCCTCAACAGAAACAATATGTTTGATG
GGTGTGGTTCCAGTCAAAGTGATTGGTAAAGTTCAACCACGTGATGCTCT
TTACTCGTGCCCAGACCACCCTGGTGTCGCAATCAGCCAATCAGAGTTGA
GTAAAGACGATACAGAGAAATCGAAGTATGCTTTTGTCGGAATGGCTTTT
GAAGGGAAACCTTTAAATGATTCTAAAACNTccaaactaagctaacaata
aattaataaatcaattgataaatgcatggaaaagaaaaaaaaaacttact
acagaggataaatactaacaaaaaataaaagagaataaaaacaaaaagag
cttggagagcagttagagtaaaagactaaaataacggtcccccaaaacgg
cttgtatcacagataaattttattgttatacTCAATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TGAAAACCTATCAATATTTATCTTACATACAGCCTCAACAGAAACAATAT
GTTTGATGGGTGTGGTTCCAGTCAAAGTGATTGGTAAAGTTCAACCACGT
GATGCTCTTTACTCGTGCCCAGACCACCCTGGTGTCGCAATCAGCCAATC
AGAGTTGAGTAATGACGATACAGAGAAATCGAAGTATGCTTTTGTCGGAA
TGGCTTTTGAAGGGAAACCTTTAAATGATACTAAAACTGTAAGTCATTTT
GAATATTGGAATTTTTGGAGATGTAAACTTCGATCAGAGAGTATTTGTAC
TTTCGGACCAATATTGGGCTTAAAATTAGGCTTTTAAAGAAATACTGTAT
GTATGTACGTTTGACCTTACAGTCCATTTTGGTATTAAATCTTGGAGGAA
AAAAGCTCCCAAACAACCGAAGGCAATTCCCTCAATAACGCAGATACATA
ATATTACAAATTACAAATAATTTTCTACCTTGAATAATTATGGGCGACAA
CCCTTTGCTGTCTTGGATGAGTGATCATGGTTAGCCGATCGGCTATCTTA
ACTATGACGGCAACCTTTTAGGAACAAATGTTCCTGACTCAATACAATGC
CttagattttagaaaaaacctTTTTACCTTAGATTTGTTTTGTGATGACG
ATTATATCGATGAACCAATCGATAACTCAGCGAATGTTCAACGAACGATT
GGAATCGATGAATGCACAATATCATCAACGAATCGAACACGTTAAGAAAA
GTGGGAAAAACTTCCGAAAAAGTAAGTTTATGGTTTCCAAATACTTTTTA
TTCTAAACTAGAAAAAGCTCGCAAAACTTTACTTTGACCTTCACTGGGAT
CCTATAAATATGTAGAATTAATTATAGTTAGAAGGTGTAATGATTCGCCG
AacattttcttgtttgcctACATTGAACGCTTGACCTAGAGCTAGTTCCA
GTCTTTTTAGGTAAATTCCCCGTGTGTGAGTCAGAAGTTTAAAGGAATGT
TAAGAgtgtttttttgtggtttttggTTTTGCATCCTAGAACTATTTGCG
TGATTGTGGATTTCATAACAATTCATAATACCCTCACTACACATATTTTA
AAACAATTATCTGAATAACAACATTTATATAATTTCTTGGAAATATAAAG
ATAAAGTGCGCTCTCTCGCTAGTTCGAACTACTATTTTTCGATTATTCGA
GTTTTTCTACAATTCGAACTAATTTCCAGTCTCCCATCAAAAAGAAACCT
TCATAGGTtgctttctctaattcgaatctctctgttgTTCGCGAACAAAT
TAGATTATTCCTTGTTCgagtttgaattagagagagtcaactgtgaAGGT
GGATTACGAGCCTCAAGGATATGTCATGCAATGAAAATTATGCTGTTCTA
TTAATTTATATACAATACAACGTTCTGCCTTCAGAACTCTGATCTATTtt
tgaaaacctttaaaaacaGTTTCTAAGAATAAGAAAAAACCATACCGAGA
ACTCAATGGCAAACGTGAGACTAATGATTTCTATAAAGATATTTGCAACC
TTGACGGAGAGTGTTTTTATTGATCATATTCTTTTTATGGGAATCGGCAC
TTCTCCTTTCTCTCTTTTTTGGACTTCTTGAGGTTACTAATGCGAATGGT
TTTTCATGgtatgttttcaaattttgacattggCATTGGGAAATTTTTAT
CTGAACGATTTTAGTCGGAAAGGACTCTTTAGGTTTTCCTTTTTATAATT
ACATCTTAAATATATGCAATCTAAGTCGTCCCTTACATATATAATAGAAT
AATACAGGGTAATCTTGTTTTCATAAACATGTCAGGTTTGATTTTAATAA
TCCGTTATGTTTTTAAGCTGTAATAAAGCCTGACCTTTTATGCTTTTAAG
ATTCTATTTTGACTTGAAATCCTATGTAAGGGCTTAAGTTGATCAATTTA
ATTCTCTTGGCTAAATCATGAACATATCAGATGACTTTTTTTGCTGACAA
ATATGATTTTCGACCTTTTTTGTTTATacttggaccgacttggagttAGC
TTTAAATTCATAGTCCAGCCAGTACAAGCGTATTTAGacttatttcactt
tttgacaTGGAGAGAAGAAGCTTTTAGTAGAAATTACTTGCATCCGTCCA
TATGTtttaatgaaataatttttgctaaaacagaacttttgattgcTTTC
TCGATATCAAAAATCGAAAGAATACACGTTCTTTATAAGAGCTATCAAAT
TATTTATTCGTGATTTtacaggcttaaatgttctggatatttttttaata
tgcTTACTTTATAAATTAAAGTTATAATCTAATGGTtaaactttttctaa
atttgtcATGTCACGAGATGCGAGGTTGATTTCTCCGAAAATGTTCCAAG
CGCTGTACCTCATCGGAAAATTTCTgcgaaaaatcgatttttggtCTTGA
AAAGGTCATTTCTTGGCATCGGAAGGTGGAAACTTGACAGATAACTTCCT
TTCCTTGATCTACTTTTCGCACTGAATGCATTGGTAGCATCAAATGTTTA
ATTTCagcgtttttgaaaaaaatcgctTGCAAAGGATCCTTGATAAATCC
TGACGGTCTATCGATTTACttgaaaaatacagaaaaagCCGAGAGGCAAA
TTGTAGGTGTAGCACCTTGTTAGTTGCAAAAACTTGTCCAGATCTAAGGA
ATGGCCCtacaaaaacctgttttaaggtcTCTTGCCTAGTAGGGTTCTTT
TGTGACATTTTCTGactttaaaattatataaattataCTTCTCCCATTTC
TTTGCAAGCCTGATAGCCTTTTTGTGGATATTCATTCTAGATAATGTGTG
ATTTGtccttttgttttgtgggttttgttCTCTGTGTTTCCATTCGGATA
GTTGAAGGTTTCGTATTTCTAGACTATTATATATATCCTTTCATAGGGTG
TCTCTGTATCTCAATCTTGGTGACATTGATTCTACTACTGGTCAGTATCT
TCATGTGGCAGTACTTCTTCCCTGGATCGAAATTCCGCTACTGGAAATGC
AGCCTTGGTCGTGCGGAGCCGACGGGTGATGTATCCTTCCGCTTTGTATC
ATTCAAAGATCTAAGTAAGGTAAAGTTAAAGCTCGAATCAATAGAGACTC
ACATATTTTTGTAATATTGGTCAGGGCTGGTGTTGCCTTAGCATTCTGGC
TcattttctggaaaatttgCATCGACTaccctagcctgggaatccatgct
atgatttcttctttgataaactgatggcgaaatgtatagcatggtacggg
ctgagagtttgaatttctcagatcctaataacggttggaaacatagccaa
tcaaattttgttattcttttactggtcgcactttcttagagaaagcacaa
ctttcgaaatttggtttttattttagtaagtgaggatagcgctaaattcg
aatttcccactgtaaaaaatgtgagtccaatattggactcacagctcgaa
cccgtcttatgtacatcaaattataaaaaaacacacgacgggtctcctgt
ctacgaCTACCCCTGATTTTATACTATATTTATATTAGGTCAAGAGCTAT
CGTTTGTCATGGTTAGATAATCTAAAATCCTTGTACTTCACGAGATAGTG
AAAACAACTAGTCTAGTTTCAGGGCTCGAGCCTTTTTAACTTGGCAAGTG
TACACCCTCTAAAATATAGTGGATGAAACCCTTCCCTCCAGAAAACCCTT
TTAAATCAGCTTTCTATATAAGATCTACAGGGTTGACTGGCTAATTTCCT
AGCTGCTCTTACTCAAATTTCTTATGGAGCACGGTGAAATTTTGGGAGAA
ATGTTGTAACTGACAATGCCTGGGTGGCGAAGATTTTTGCAAGATTTTCA
CTATAATTTCCATTTTTGCACCTAGATTAAAAGGTTTTGGGAAATTTCTG
ATCTGAAAACTTAAccttcctaattttttgagtatGGAGTTTGGATATCC
TGGAGTTTATTTAATGATGCTGTAAACGAAATTATGGTTTTGTGGTTAAA
CCACAATTTTGAAGGTACTATTCCTGTATGAACAATTTTCTCATAAAGTG
AACTTAACAGAATCACTTGACGTAATGTCatagaaacattcgaaattatc
tgattaggcgagaccaatttgattagttgttttttaCGGGCCcaaccgac
cctgaaattccaaaaattgaaataaaaataaaattgattttggtagtaaA
CTCGGGTccaaattttggtagtttttccaaggttttgagaattttatgtt
caatttttcatctccTTTTGGAAAACAATTGGTTATGTGGTTAGTAAATA
TGacattaaacttttttttgaatttaataatTAGCAGTTTTTAGTACTCT
CGGTTTTAGCACCATACTGCTAAAAgtaccaaaattcaaattgcTGAGAA
TAGGGACTTTACAGTGATGTGATAGTTAGTGGTACCTTGATAATTATATT
TTGCTTAAAATTGCAGTCGGAAAATTGTAGCGATATCAATGCTGATATCC
TGATTTTGGATCCAAAAATCCGTCATCCGCCAATAATGAAATTCGTTGCC
AAACTTAGCTTTTTCCTtgatctgccaaattaaatttccttcCCTTTAGG
TACTTAACAAGAAATATTCAGAAGCCCTTTTATGCATGAtgttatttttt
gcacaaaaagattttttgcacaaaaagagccataacttttgaaacatcaa
tttagaaaatttttccgaaaaatttcagatagttcaatcttttgcagaca
atttaaaaaaaaatcgaaacaaaaaagttaattacccattaaaacttagc
actttttgtaaaagagggtaatataacattttattaacgtctttttaagg
ttcataacgtcatttttaaattgctaattactcttgataaaataaattca
gaaacaacttataaagacaatttttcgttaaaagtgttaaggaactcaaa
acaaaagttttatctctAAATCTGCGTAACCGATCTTTTGACTatagtca
gagcccttaaatgatAATTTTCGTATGGTTTTCTCGAGTACTTCTTGTTT
CATAAGATAAacatattttcatttcaaatagcACATTAGGATAAAATTAT
CTGGGTTTTAtaatgatatgaaatttaaaatttattacatTCTATATTTC
AGTACGTATCCGTGCATGGCATAAGATTCGAATATTTCGAACTGTTAGAT
AAAATGGATCTGCAACATTACGAGCCACTTAATCTAAATGATACATGTAA
GTGTAAATTTATATATTTGTACATCCCATGGCTGGGTAGCTAAGtgggta
gagcattcgccttacaatccgagggttgtgggttcgatccccggtcacca
cAAACTCAGTGAAAGAGTAAAGCTTAAATTGGGTGATATGATCTAGGTGA
TAATGAGAGTAGGTTTGgcactccacctcagcattcgatttCACTTTACA
ACGGAAAATCATCAACACTCTGGGTAGATACAAAAGCAGCTTCAACTTAT
TAGGCGGTCAGTGTCAGGGCCGTTTTGACtacaaaaatgttatttttgtt
ggTGAGCACGTGGAAAGCAGTGAGAAGATCCCGGGAATGCGCCAAGAATA
CTTCCCCGGGAACGAGAAGGTTTAGCCTTGATCATCATGTGGCAATCTca
taaaaattccttttgaaatTCGATTTCGGTTCCTTAAACTGCTAAGTCAC
GCATAGAATAGAATGGGCTCATGCTTTTAAGCATGTCTGACTGGAGACTG
ACTATTTTNCCTTAAACTGCTAAGTCACGCATACAATAGAATGGGCTCAT
GCTTTTAAGCATGTCTGACTGGAGACTGACTATTTTCTTAAAgttgtttt
tgacattttcatcaaaacaaccCACGGTTCTGACCGGAGAAGTCGAGGTC
GCTGAATATGCTGATATACCGTCTTCcacagtcagtcaggatgtgGGAAG
GTCATAAGCTAGCTATCTCTGTCGCAGCAATACATGAATCTGCTTTTGTC
TGCACAGTGGaatctccataacttgaacacgCTCATGTgaacaaaatttt
cttcgagtttCAGAGAACTTTTTGATCAGATTTCCCAAAGAAATTGTGTT
TGAGTTTGGAGAATTTACATAATAATACACAATTATATTTACAAACGCTT
TCTTCCAGCTACTAGATATTACCTGAACATTGATCGTTGTGCGCATGGTG
GTATCCGACGGACTCCTGACACATCGCGCGGTCTGAAAGTGGTAGCGGGT
CCAAATATCTTTGCGGTAGACGGGGGTTGCAGATATGTTTATTTCTTCAA
CGACAATTTgggaaaatggagaaaatatttGACGGCAGACGTTTTGAAAT
GCAACCACGGTGACTGAaacaactttggaaatataaGTATTTTCATTATC
ATTAACTTTTGACTATCGAGAGCCGCTAAAATGCCTCAACTTTCGTTTGA
TTTGAAGACCCTGTAAATATAATACTATAACAGGTTTTGCATTGTTCACG
CTGCGAACCTCAACTTCCATATACGGTATTAACAAACCTTTAGAAAACTG
TGGAAAGTGCTGGgctatatatgtgaagaaacaAGAATTTCTGttcaact
atattcactcagaaGATTtcggtggcagagcagcatatgcattttgTCCT
TATATATAATACACTTTCGTGATATAATGGTCAGTACGGAGTGATTCTGA
TGTATTAGTACATCCCTAGAATCACTCTTCTTACCGTTACGGCTTTCCTA
CTAATATTAGCCAACTGGATCGCAAAAGTCTGTTCTAGTGAATAAAAATA
GGATATCTGTGATCGacattagcctatttcatagaaTTCGTGTTTTGagt
aaattatatttttctacgTTACTGCATTAGTGatcaactttttattttca
gtacTGTTACTCCTTTATGAATTGAAATTAAAGGTTTTGCAAAGGCCACA
CTGGGCCCAGAggacaaaagtttggaaataggGAGTGGGAGAACAACAAG
ATAgtatttcttacattttttgtaTTATTAAGGCATTAGTAGAGCTCTAG
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042391XLOC_042391Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067869-exon-scaffold_477-1491911889:75473..75605TCONS_00067869-exon-scaffold_477-1491911889:75473..75605Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1510915933:75473..75605TCONS_00067869-exon-scaffold_477-1510915933:75473..75605Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1575043694:75473..75605TCONS_00067869-exon-scaffold_477-1575043694:75473..75605Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1491911889:76794..76927TCONS_00067869-exon-scaffold_477-1491911889:76794..76927Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1510915933:76794..76927TCONS_00067869-exon-scaffold_477-1510915933:76794..76927Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1575043694:76794..76927TCONS_00067869-exon-scaffold_477-1575043694:76794..76927Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1491911889:80104..80260TCONS_00067869-exon-scaffold_477-1491911889:80104..80260Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1510915933:80104..80260TCONS_00067869-exon-scaffold_477-1510915933:80104..80260Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1575043694:80104..80260TCONS_00067869-exon-scaffold_477-1575043694:80104..80260Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1491911889:82905..83110TCONS_00067869-exon-scaffold_477-1491911889:82905..83110Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1510915933:82905..83110TCONS_00067869-exon-scaffold_477-1510915933:82905..83110Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1575043694:82905..83110TCONS_00067869-exon-scaffold_477-1575043694:82905..83110Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1491911889:83505..83643TCONS_00067869-exon-scaffold_477-1491911889:83505..83643Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1510915933:83505..83643TCONS_00067869-exon-scaffold_477-1510915933:83505..83643Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1575043694:83505..83643TCONS_00067869-exon-scaffold_477-1575043694:83505..83643Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1491911889:85819..85991TCONS_00067869-exon-scaffold_477-1491911889:85819..85991Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1510915933:85819..85991TCONS_00067869-exon-scaffold_477-1510915933:85819..85991Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1575043694:85819..85991TCONS_00067869-exon-scaffold_477-1575043694:85819..85991Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1491911889:88075..88168TCONS_00067869-exon-scaffold_477-1491911889:88075..88168Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1510915933:88075..88168TCONS_00067869-exon-scaffold_477-1510915933:88075..88168Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1575043694:88075..88168TCONS_00067869-exon-scaffold_477-1575043694:88075..88168Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1491911889:89081..89973TCONS_00067869-exon-scaffold_477-1491911889:89081..89973Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1510915933:89081..89973TCONS_00067869-exon-scaffold_477-1510915933:89081..89973Clytia hemisphaericaexon
TCONS_00067869-exon-scaffold_477-1575043694:89081..89973TCONS_00067869-exon-scaffold_477-1575043694:89081..89973Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:75473..89973 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0744486	0.150254	0.142175	0.371272	1.28289	0.875829	0.394031	1.5091	1.52452	1.82699	3.41201	0.414674	8.8352	3.13119	4.93072	6.6415	3.26526	3.55145	7.5925	7.66954	1.39971	2.17001	3.60977	6.63848	6.7327	4.56477	5.42199	4.56263	3.48	0.77435
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067869 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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