TCONS_00067826 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067826
Unique NameTCONS_00067826
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2265

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067826 ID=TCONS_00067826|Name=TCONS_00067826|organism=Clytia hemisphaerica|type=transcript|length=2265bp
TAGACTGACGAGCGTGCccaagaaattgaaaagaacGTCACCGATCAAGA
GCAACGATATTTGAAATACATGTCCAACTTGGAAGAGTTGCAGTCAGTGG
AAGCAAGACAATGCTCGAACCTTGAAACACTACTCGAAGAACTGAAAAAT
AAATGTGAAGAAAAACAAGACACGGTGGAAGAAATCAGCTCAGCCTTCAT
AAAATTCAAATATGACACAGCAAAAGAATCAATCAGTACAAGAACTGGAA
AACCCATCCCAGTCAAAGATTTGGAGCAATACCAAATGGCCGAACAGAAA
AAGGAGAACGAAGTCATCGCTGTTCGTTTGGAGAATATCAAATTGAAAAA
CCGACTGAAGAAACGGGAACAACAGCTCAAAGCTAAGGAAGAACTTGCAG
AAGGTTTACACTTGATTGATTTTGaacaattgaaaattgaaaatcaaaca
tATAATGAGAAGATTGAAGAACGTAATGAGGAATTATTGAAACTTCGGAA
GAAGATAAATTCAACAGTACAAGTATTGAcgcatttaaaagaaaaactcc
aACATGTTCAGGGAGAAAACGGTGAACAACGAACAAATTTACGTGATATT
GAAGTCACTGTAGCTCATaAACGTGACCTGTTGACACGCTTGAAACAAGC
ACGTGACTCCCTTCGCTTTGATAACACCAAGTTGAAGCATAAAGCTGGTC
TCCTTGGAAACAAACCGTTGCTAAGGGATTTCGAGGAACGAAAAGATGAG
AGTGAGGAATTGAGGAACCGGCTGGCAAATTTGAGACAGAATCACATGGA
GTTGAACATTAACTTGACCACTAtcagaaagaaaattgataatgTCAAAA
CTATTGATATGCAGTAGCAataattattatcaattttttgttgtcttgag
tgttgtttcaacattcattgGTTTATTTAACGTTAAACGAACGTTGTGGA
CGTTAGATTGACGTTGTTCGGGCGTCCTCAGACACTAATTTTGAAGTTGG
acacaatgctggacaaaaggtttgtagacttctgcaatatttgcaaaata
cttcaatatcgatcaaaaacaagtccccaagaggctctgggtgctttcca
aacctatTCAAAGTCATTCAAAGTCACCcgctgcagtctaaccgcaaggg
caaaccacaagggcttgactaactggcttacaccagtatcaaaacgctga
ttttttgcttgtggttccctcaaaagcaattcaaaagcaatgcaacgact
tcaaaagtgtttttcttaacttccatcccctttcagacacaatgaagagt
cattttgctctatttctcatcattttttactgaaattccatttgtctaca
accttttgtccggcattgcaTCATATCTTTTCTTGTTGACAGAAATGTTT
TATGAAACTATCCTGCAACGTCCGAACAAAGTCGATCTAACGTCCACAAC
GTTCGTTTGACGTTAAATGAACGAAAACTTTGCCTTTTATGACAGTGGGT
TTGAGATCCTAGGAAGTCTCTGTCGATAGCTAACATGCtacaattttatt
atttattgtcaaatttcaattcaaattGCCTTTTCGAGATTGAGTTTTGC
AAGGAAAGTAATGGGGTCTGTAAAATATCGGATATCTTAATCTACCCCTT
TTTTCACTGTTcaaaccatagatttataaagcccgataGGCTAGATGGCG
TAcctttgctgaaaagtgtgccgtggctAGATAAGAAATCCTATCTAAGT
CACGTggcattacaatagaatttcaacgcttgaccaataagaagctttgc
gggttttcgaaaacattttttccgatattcactttttttgcctgcgatgg
ctttaggcacgacatctagctcttcgggctttacaaatcTATGGTTTAAA
CCCGTATACAACATTTATATTATTAAAATCAACAGGGTAACATTATCAAA
AGGAAACCGCGACAGAAAAATACACAAATTATAATTCATTTAACTGATAG
TTCATGTGAATGCCCCCTAAAGGTAAAACTGGGTAAAAAGCAtgaattga
gatttttcatagtATTGAATAATTAATATCATTTCAAAAAGTGGGTTTGC
AGGAAACCTAGAAACaaacttattttcaaaataagtttACAGTTTTTTAA
TTCATCCAAATGTATATTGAATATATTTCTTTAATTTGTCAAtaatataa
aaaagtgtaaaaatagatattctgatttttatttttaaaacttcaaaata
ataataatcttttCA
Run BLAST on NCBI

transcript from alignment at scaffold_476:100945..110831-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067826 ID=TCONS_00067826|Name=TCONS_00067826|organism=Clytia hemisphaerica|type=transcript|length=9887bp|location=Sequence derived from alignment at scaffold_476:100945..110831- (Clytia hemisphaerica)
TAGACTGACGAGCGTGCCCAAGAAATTGAAAAGAACGTCACCGATCAAGA GCAACGATATTTGAAATACATGTGTAGGCAATTTTTTCTATACCTATACA CATGTTTTTTTATATAAGAACAAACTATGAACCAGGTGTCGTAGAAAAAA GTCCCCCACTTGGAAATGAAATTTCCTTGAGAAGTAATGTTTTAGCATTC TGGTCATAACATTTGATTTAGTCAACCAAATTTGATAAATGACACCTCAA AATTTAAGTTTATTCTTCTTCTTTCCCATGCAAAAAGTTTAATTCTTTAA CGGTTCATCAAACTCGAGAAATTTAACTTCAAAGCTGTTCAAAGAGGGAG ACTTCTTTTCTGGGACACCCGGTATAAACACAAGGCTTCAATGCGATTCC CAAAATATTAAAGAACAAGCTAGTATTAGAGTATTAACTCCGTATTTTAA GACTGAAGACTTAGGATCTCGAATTCAAAACTTTTGATCTAGTGGGTCTT TTTGGATGAAATTTGGCTCACAAGATCCTTGTCGTAACTTTCTACCAAAA AAATCTTTTTAATGACGTCACTTACCACGCCCAAAGTGAGTAAAAGCCGA AAATAACCTTTGTTCTTATAAATGGCTATTGCTATTGCATTCTAACAAAG GCTTTAGAAAAAGGTTGCCTGAGTCTAAAATGCTTTTTTATACTAAATAT TGAATAATTACGGTTGAAACGATATATTTGACATAAAAAATAAATTTGTA TGGGAAAACTTTACCGTCAGAAATGTCATCATGGTAAAGGCTGGAAAATT TTTAGGTGTCAAAACTTTGTTTATTTTAAAGCTAAATAAAAGTTAGAAAT TTCATGCCAAAAGCTCTATTATTTCAGAAGCTATCAACATTAGTTTCACC CGAACAGAAACAGCCCCCAGTACGAATAGGGTTGGAACCATTGAGTTTCA AGCCCGAAGGGCGAAACTTTAACCCTTTTCAGGCAAGAGAAATTGAAGCT ACGTATTTCCCATCCAGAATGCGCTGTAATTATGACAACGGATTGTATCT AGCGGTTACTTTGTTAGAGGAATACATTTTTTGAAATCTATCGATAGATT TTAGTTTCAATCCGGTGTTTGTGTAAAAACTACGCGCGGGCGTTCTGGAT GGGAAATAGGTGGTTTCATTTCCCATCCAGGAGTCTCGCCTCTAGCCCTT CGGGCTTGAAACTCAGTGGTTGACACCTCTCAAGTCAAAACTCTAAAGAA ACAAAGTGGAAGTACTGAAATAGTAATCCTCGCCCGTTTCTGAAGAACGT TCAAATACCCAACATTGTCAGTATAAAACGACGATGATTGATTCGATACA TTTACATTTTTTAAGCCAACTTGGAAGAGTTGCAGTCAGTGGAAGCAAGA CAATGCTCGAACCTTGAAACACTACTCGAAGAACTGAAAAATAAATGTGA AGAAAAACAAGACACGGTGGAAGAAATCAGGTTTTTTACAATTTATTAGT ACAGTGAAGTCTCCATAAGCCATTACCGAGTTTATGCATGTGTGTTTTTC CGCGACGGAGACGGTAAGGTTCTTATTTGGCGCGTCGACAGGGTTGTAAG TTTATATTATGGGCCATATTTCTGAGGAAACGTTTAGTTAGTTCACGTTT GAATTTGGAAAGATTTAAACTTTTTTCTGAATTGTTATACACCTTTTCGA CCGTAGCTGCCGATTGCGACGCGGGCATTTTTTGTCTGTTATACCACCCT GAACTCGATCCAATCCTTTTTTTTACACCTTTTTCTATTGTCTATAGGTG CAAAAAAAAAAGACTGGGACGGTTTTAGGGCGGTAAAACGGACAAAAAAA TGCCATCGCGAAAATTGGCGGCTACGGTCAAAAAGTGTATTGGGGGTCAT CCCTCCCTTCTTTTTAGTGGACACATAACCGGACTAATTGAATTATTCTG TGTTCTTCTTTAGCTCAGCCTTCATAAAATTCAAATATGACACAGCAAAA GAATCAATCAGTACAAGAACTGGAAAACCCATCCCAGTCAAAGTTAGTTG GCACTGTTTTTTTGTTTTTTTTTGCAGTTTTTCTGTTTTTCTGTTTTTAT TTCTTCAGCTGTAAGGATCGAATCAGATGTTCAAAGCATCCTCAAAAGCC TTAGCTTTGGCTTGATAACTAAGATATAACATTTTTTTATAAGAAAAGTG TTTTTTTTTGGAAAACACTAGAAAAGGAATCCTCGATAACTACATAATGT TGTTTTGATTGTGAGAGAAAATACTAGAATCTGATTGGATGCGATAAAAC GAGCAACAACGGAAGAGTAGTTTGCAATCAGGCGTTTGTATAAATAGAGT GAAAACTTGTTGTGCGGTAGTTATACATAACGCCTGACACTCTAGCTAGA GAAAATCCAGAATCCATACTGTTGAACATTTCCTGGTGCATGTATATTGA ATCCTACTTTTTCAGGATTTGGAGCAATACCAAATGGCCGAACAGAAAAA GGAGAACGAAGTCATCGCTGTAAGAATTAAGTTTTTATTTCGTTTATTAA AGGTTTAATTTTTTAATAAGAGTGGTATCGTTTGCTTACTCATCAATTTT AATTTACAAGCTTTTTCACATTGAATTGACACGGATGTGAAGCAAGATTG GTCAGGAAGAGGAAGGAGGCGATCCAAAAAATATCTGCAATCTGATTGGT TAAAAAGAGTACAATATAGCTTGTATTTTACATGTACAAAATATAAATTG ACAAAAAGATGTTGTTGCATTGTAGCGGTAGAATCAATCTAACTTTAATT TGCTACAAAAGTGCCCTGCGCTTTTTTCCAACACAAAAAGTATTTTTTGG GTCACCGATAAACCAGTTATCAGACATTTGCTTGTACAAAATGGAAATAT TTCAGTCGTTCCGGATTTTCCGTATATTTTCCTCGCCTAAAATATTGCAC GGAAAAATCTCGGAACTCGTTAAATATTTCTCATACTGTACTCACAACTT TCCGATAACTATTACATATCAACACAATATAACAATAGGCAGACACTGTC CTGATATGAAACATGTGTCTGATTTGAAATGGGAACACTTATGCAAAAAT AAAACTTTTAACAAAGTATTTTTTTCATATTTTTTAGAACTTTGAAAGTT TTCATGTGAACAATCGTTTACTACATACAAAATGATTTAATTTGTTGAAA ACAAAATTCAAATTTGTAACTCTTTTGCTTTGCTGCTATCTTTGTAATAC TTGTATCCCAATTTGCAAAATACATTTTAAAATACGTTTTTTTTTTAAAG CAAGTGTATCTAGGCATAGTTCATGCTTATTATATGCTTATGATTCACCC CCGAGCCAAGTTTTTAATGAAATTTCAGAAATTTTGTAAGAATTTGTTCA GATTTTGGGAGCAGTGGAATGTAGCTAGCCGTGGAATGTCTTATTTTTTA CTTGACCTCTACCAAACCTTTTTTAAACAGATAAAAATGNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTTTAGGCTGACATATATGCTCATGTTATGCTTAGG AATTCTGCAAATCTGAGCCTTCATATGCTTATAAGCGTTATGCTTATAAA AAAAAACATGTAGTACTTAACCATTAAAAAGTTGATTACTGCAGTGACTT AGAAAAATATCATATACTAAAAACAAAAATTTCATTGAAATAGGCAGGGA TTTTTCTAAGCCCTTTGAGCTGGGGGCCGTTTTTGTAAACTTAGATCGAA TTTCTAATATGCCTGAAAGGGAACTTGCTCAGTAAAGCTGTGCATTGATA AAACTGGGGGTCTTGTGGGTGTTCAGAGGGCGAAGCTAAAAAAACTCTTG AATATAATATGTAGATAATAATTATTTTTTTTTGGTCATAAACAACAAAA AAGGTTAGTTTCGCTAGAAAAAATCTCATTTATTTCGGATTGGGTTTCAA AAACTCAAAAATTGATTGAGTATTGAAGTATTGAAGATTGAGTATTTTGG GGCGGTATACGGACATAAAGAAAGTGCTTAGAAAAATCCCTATTACCCTC GTAATAATATAGTTCACTTAAAATTTGTTGTTACAAGGTTCGTTTGGAGA ATATCAAATTGAAAAACCGACTGAAGAAACGGGAACAACAGCTCAAAGCT AAGGTAACGAAAGTTTCATAAAAAACATTACTCTAGTGTGTCCTTTGTAT TTCTACGAGTCCTTTTGATTTGTCAGGCCGTCAGGCGAAATGGGGTTTCA ATCAATGGGTTTATGCAAATTACTGTTTTCCTAAATATCTCTGATTGCTT ATAAAGATTCGGCTAAGTCTGTTAGCAAATAAAAATGGCACAGATGACCC ATAGCTTAGAATTTGAATAGCGACACCCAATTATACCACCTTATCAGATG ACGCAAAAGTTTGGCTGGTCAAAAGATCTTAACCATCATAAACAGAGTAC TGTTGCTTATTTAAACTTTTTATATTCGAATCCCTCGGGGAAACTCCCGT AAAACGATTTCTATGATTCGAGTCTGTCTATAATTCGAACAAATTAGACT TCCCGTTCGTGTTCATATTAGCAAGAGTCAATTATACTGTTTTAGGGCAC AAAAATACCCTCAGAACCCAGAAGAAAATTTTGAGTATAATTCTCAACCA TACGACTATTGTCCAAAGCAAAATAGAAACTCTCAGAATAAATAAGTATT ACTGAATTCAGCGGTAAAGGTAGGTAGTATTTTGTAGTCCCCTTAAAAAA TTATTAGTGACATTGTTTTTTTATATACTATATTACTCTTATGAATATAC TTCCAGGAAGAACTTGCAGAAGGTTTACACTTGATTGATTTTGAACAATT GAAAATTGAAAATCAAACATATAATGAGAAGATTGAAGAACGTAATGAGG TAATACGAACTATCGACCTTTAGACCATGTTCAGACGTTACGGTTTTGTA TCGCACCGGCATAGTTTTCGTTACGGATTTAACACAGTGTTTCGTAACTT TTCGTTTTGGAGAGATACGAAACCGTGACGTTCGAACATGGTCTAAAAGC GTGACGAGGCTGGGTTCGAGTTTACCAGGTGAAGGAATGACCTCAAAATG CCTGAAGTCATTGCATTGATATTCTCACAGTCAAATATTCACTGTTTCAG TGGCTTCCAGGCTATATTCTCAGTCTTATTCTAACATTTTTTAGCGTTCC TGAGATCCTAAGATAATCTAAAGTCTCATGTTAAGACTCAGAGTAAAACA TTAAAAAATCACTGACGGTTTTGAGGTTACTCCCCGTAAGTGCCAAATAT TATGGCGGTGATTGTAGCCCTGGTACCGAAATCCCCTTTTCTCAATCTGA TCTTTCCGATTTTCTGATAGGGAAGGCTTCAGCAACGGGTTTGATCGTCA GTGAGACATACAGTGGGACAGATTTTTGTTCTCGTTTTCTGATAGGTTTA GAAATTTCGAAATTATTATTGTGTCACTTCATAACGCTATGAGAGAGAAG GGATGTGAAGGTGTAATCTGGATTTTTTGCCAACGCAGTACACGTTTTTT TTTCTTCATAAGAACAAACTTTATGGCCAAAATGTTAAGAACAGGTTAAG AACATTTCAAGACTTTGTGGACTAATTTCATCGGAAAATGGACAAAAATA CTCAAAAAACGGCAAAGATAAGAACATATTAAAAACATTTTTAGGCTTGA AACTCAAAAAGGCTTCAAAAATTTAGGATGTTCTTATAAACGTGCATCAA GTCCAGTGTTTTTTACTGGTTACGAGTTTAAAAGATTCAACTGACACTTG ACTGTTATTTTGACCCGCTATTGCCCTGTCCCCTTTGTGGTTTTTGAGTT GACAGGAATTCATATTTCTTTGTTAGGAATTATTGAAACTTCGGAAGAAG ATAAATTCAACAGTACAAGTATTGACGCATTTAAAAGAAAAACTCCAACA TGTTCAGGTTAGAATTGCGCTAGCCTCATTCCTATACGATTATTAAAATC ATGGTCGAAATATATTGAGAATTGTGTATTTGTGTATTTCAACTTTTCAA GTGGCTTATTCTTAGCCTTATTGGAACATTCTTTGAGCTTTTTGATCTTG TAAATCTTAAGTCTCATGTTAGAATTCAGAGTTAAAGCTCTTACTTTCCA ACCGTACTACACATAAAAATCATTTCCGGTTTTAAAATTTTTTTTTGACT TAATTCCCCTCATGTGAAAATATGTCTGTTTATGTTTTATATCCAGGGAG AAAACGGTGAACAACGAACAAATTTACGTGATATTGAAGTCACTGTAGCT CATGTAAGTACGAAAGTCTTTCTGTCTGTCTCTCTATCTATTTCTCTGAC CATGTTTTTCACAGCTTCAAAAATTTTAAGGTCTTCGACCGCTAAATCGT AAAAATATGTAAAATCAGATCTGCGTCCGCTAACAGAAAAAAAATATTTG TGCGGGCCCCCTTGAAACAGATAGGCATACAAATCCACTCCCAATTTACT CTGTCTAATGAGATCTCTGGCTCGTGAGCTGGGCAGTAGAGAAGGGAGTA TGACAAAGTAAGTAATTTTGAGACCGCAGTCGAGGGCAACCCGAAGGCTC CCCTTCCTTTAACTGTCTACCCAAAGGTAGGGGAGGGCGCCACATGAGCA CTTTTGGAAGTCATAGGTATTACTCGAGTTTGGAGTTCGTACCCACAACC TTGCGCACCGTAGCTAGATGCTACCTTCGTGCTATGGCCGCTTAGGAAAA AGCATAGCAAAAAGCAGGTAATTGAATAATGGATCCCTGGTTTGTGACCT TCCTCGAACGTTTTAGACCATTTTTAGACGTTAGTGTTTCTTATCGCTTC AGCATGATATTTGTTGTGAATAGGAACAGTTCCTACTGATTTTGGAACGT TTCGGAGCAAGAAAACGGAACAGTTCCGTTCCTATGAAAATAGTGGAGCG AAACCGTTTCGATCCATTTTGCTTTGTGACGTCTCGAATTTTGACGCTCA CACAGTGTTTCGGAACCGTTTTGTTTCGCAGCGATACAAAACCGTAACTG AATATTGCCTTAATCAATTTTCATTTTCTTTTTTCCAGAAACGTGACCTG TTGACACGCTTGAAACAAGCACGTGACTCCCTTCGCTTTGATAACACCAA GTTGAAGCATAAAGCTGGTCTCCTTGGAAACAAACCGTTGCTAAGGGATT TCGAGGAACGAAAAGATGAGGTATGCCCACGTTTTTAAAGTTTTTTCAAC AATCACACTTTAACCTTTTTTAATTTATACAGTTGGAGTCTCTATAATTC GTACGCATAGGAGGAACCCAACATTTGTTCGAGTTAAGGAAATTTTGAGT TATGGAGTAAGGTTTACGATGAATTTGAAGGGACCAGAAAACTTACTTAT TACTTATTTGAGATACAAATATGATGGTCCTATGGTTATTATTCAATTCG TACTTACCTGGGACCAAATCTTCGTACGGGCTTTTGATTTGTTGGTGTGT ACGCCTATCAACCCTTAGGGACGCGATCGGCTTCTTATTAGGGGACTATG AATTTACAAGGAACAATTGTTCTCAGGCATTTTTAGGCTTACAACTAAAT CAAAGCAAGCAAATTCCCGCCAAAGCTCTAGAGGCATTTTTCCAAGTCTC TGCGGTAGAGTGAAATCTATTTTTAGCACTTGGATAACTTGAACTATATT GACGTTACTTTTTCACTGGGTATCTTAGATTTTTCTTAACCCTTAGACTA CGAGGGACGCGTATATGCGTCCAAAACAAGCCAAAATACTCATAGCTGCT GACCACCTGATTTAAAGGGGTATAAACCGAATGCTTTTAGAAAGAATATA AAAATAGCTTTCCAATGGTACCAAAACCATCTACAAAATCAAAAGTTACA ACCTTTTATGGCACTCTAAAGTTTCGAGTTTCAAAACGAAAGTTTAAAAA AATTTCAACTTTTTCAAAAAAAACAGCGCGCACAAAGGGTTAAGAGCGCT ACACTTGTGTTTACGATACCTTCATCGAGAAGAATTTTCCTTGCACTTTC GTTAGCAGTTTCTTCAAAAGCAGTAAGGGTTCATAGGTGTAGTGAATAGC TTGTTATCACTTTCTTTTTCAGAGTGAGGAATTGAGGAACCGGCTGGCAA ATTTGAGACAGAATCACATGGAGTTGAACATTAACTTGACCACTATCAGA AAGAAAATTGATAATGTCAAAACTATTGATATGCAGTAGCAATAATTATT ATCAATTTTTTGTTGTCTTGAGTGTTGTTTCAACATTCATTGGTTTATTT AACGTTAAACGAACGTTGTGGACGTTAGATTGACGTTGTTCGGGCGTCCT CAGACACTAATTTTGAAGTTGGACACAATGCTGGACAAAAGGTTTGTAGA CTTCTGCAATATTTGCAAAATACTTCAATATCGATCAAAAACAAGTCCCC AAGAGGCTCTGGGTGCTTTCCAAACCTATTCAAAGTCATTCAAAGTCACC CGCTGCAGTCTAACCGCAAGGGCAAACCACAAGGGCTTGACTAACTGGCT TACACCAGTATCAAAACGCTGATTTTTTGCTTGTGGTTCCCTCAAAAGCA ATTCAAAAGCAATGCAACGACTTCAAAAGTGTTTTTCTTAACTTCCATCC CCTTTCAGACACAATGAAGAGTCATTTTGCTCTATTTCTCATCATTTTTT ACTGAAATTCCATTTGTCTACAACCTTTTGTCCGGCATTGCATCATATCT TTTCTTGTTGACAGAAATGTTTTATGAAACTATCCTGCAACGTCCGAACA AAGTCGATCTAACGTCCACAACGTTCGTTTGACGTTAAATGAACGAAAAC TTTGCCTTTTATGACAGTGGGTTTGAGATCCTAGGAAGTCTCTGTCGATA GCTAACATGCTACAATTTTATTATTTATTGTCAAATTTCAATTCAAATTG CCTTTTCGAGATTGAGTTTTGCAAGGAAAGTAATGGGGTCTGTAAAATAT CGGATATCTTAATCTACCCCTTTTTTCACTGTTCAAACCATAGATTTATA AAGCCCGATAGGCTAGATGGCGTACCTTTGCTGAAAAGTGTGCCGTGGCT AGATAAGAAATCCTATCTAAGTCACGTGGCATTACAATAGAATTTCAACG CTTGACCAATAAGAAGCTTTGCGGGTTTTCGAAAACATTTTTTCCGATAT TCACTTTTTTTGCCTGCGATGGCTTTAGGCACGACATCTAGCTCTTCGGG CTTTACAAATCTATGGTTTAAACCCGTATACAACATTTATATTATTAAAA TCAACAGGGTAACATTATCAAAAGGAAACCGCGACAGAAAAATACACAAA TTATAATTCATTTAACTGATAGTTCATGTGAATGCCCCCTAAAGGTAAAA CTGGGTAAAAAGCATGAATTGAGATTTTTCATAGTATTGAATAATTAATA TCATTTCAAAAAGTGGGTTTGCAGGAAACCTAGAAACAAACTTATTTTCA AAATAAGTTTACAGTTTTTTAATTCATCCAAATGTATATTGAATATATTT CTTTAATTTGTCAATAATATAAAAAAGTGTAAAAATAGATATTCTGATTT TTATTTTTAAAACTTCAAAATAATAATAATCTTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042358XLOC_042358Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067826-exon-scaffold_476-1575043694:110759..110831TCONS_00067826-exon-scaffold_476-1575043694:110759..110831Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1575043694:109352..109466TCONS_00067826-exon-scaffold_476-1575043694:109352..109466Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1575043694:108790..108868TCONS_00067826-exon-scaffold_476-1575043694:108790..108868Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1575043694:108313..108366TCONS_00067826-exon-scaffold_476-1575043694:108313..108366Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1575043694:106429..106494TCONS_00067826-exon-scaffold_476-1575043694:106429..106494Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1575043694:105683..105775TCONS_00067826-exon-scaffold_476-1575043694:105683..105775Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1575043694:104625..104705TCONS_00067826-exon-scaffold_476-1575043694:104625..104705Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1575043694:104279..104335TCONS_00067826-exon-scaffold_476-1575043694:104279..104335Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1575043694:103362..103493TCONS_00067826-exon-scaffold_476-1575043694:103362..103493Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1575043694:100945..102459TCONS_00067826-exon-scaffold_476-1575043694:100945..102459Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:110759..110831TCONS_00067826-exon-scaffold_476-1510915933:110759..110831Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:109352..109466TCONS_00067826-exon-scaffold_476-1510915933:109352..109466Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:108790..108868TCONS_00067826-exon-scaffold_476-1510915933:108790..108868Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:108313..108366TCONS_00067826-exon-scaffold_476-1510915933:108313..108366Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:106429..106494TCONS_00067826-exon-scaffold_476-1510915933:106429..106494Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:105683..105775TCONS_00067826-exon-scaffold_476-1510915933:105683..105775Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:104625..104705TCONS_00067826-exon-scaffold_476-1510915933:104625..104705Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:104279..104335TCONS_00067826-exon-scaffold_476-1510915933:104279..104335Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:103362..103493TCONS_00067826-exon-scaffold_476-1510915933:103362..103493Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1510915933:100945..102459TCONS_00067826-exon-scaffold_476-1510915933:100945..102459Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:110759..110831TCONS_00067826-exon-scaffold_476-1491911889:110759..110831Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:109352..109466TCONS_00067826-exon-scaffold_476-1491911889:109352..109466Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:108790..108868TCONS_00067826-exon-scaffold_476-1491911889:108790..108868Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:108313..108366TCONS_00067826-exon-scaffold_476-1491911889:108313..108366Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:106429..106494TCONS_00067826-exon-scaffold_476-1491911889:106429..106494Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:105683..105775TCONS_00067826-exon-scaffold_476-1491911889:105683..105775Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:104625..104705TCONS_00067826-exon-scaffold_476-1491911889:104625..104705Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:104279..104335TCONS_00067826-exon-scaffold_476-1491911889:104279..104335Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:103362..103493TCONS_00067826-exon-scaffold_476-1491911889:103362..103493Clytia hemisphaericaexon
TCONS_00067826-exon-scaffold_476-1491911889:100945..102459TCONS_00067826-exon-scaffold_476-1491911889:100945..102459Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_476supercontigscaffold_476:100945..110831 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.4368 1.76221 3.62872 4.73739 12.8527 10.1967 15.1119 15.1569 8.75663 8.38792 5.43318 5.83074 3.43915 3.62581 3.2775 3.41894 3.37078 3.54467 4.61542 5.50544 6.77769 6.48444 3.98204 3.24575 19.3711 17.204 7.356 8.0852 3.87644 4.65316
Blast
BLAST of TCONS_00067826 vs. Swiss-Prot (Human)
Match: CCD96 (Coiled-coil domain-containing protein 96 OS=Homo sapiens GN=CCDC96 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.885e-43
Identity = 123/282 (43.62%), Postives = 178/282 (63.12%), Query Frame = 1
Query:   28 EKNVTDQEQRYLKYMSNLEELQSVEARQCSNXXXXXXXXXXXXXXXQDTVEEISSAFIKFK------YDTAKESISTRTGKPIPVKDLEQYQMAEQKKENEVIAVRLENIKLKNRLKKREQQLKAKEELAEGLHLIDFEQLKIENQTYXXXXXXXXXXXXXXXXXXXSTVQVLTHLKEKLQHVQGENGEQRTNLRDIEVTVAHKRDLLTRLKQARDSLRFDNTKLKHKAGLLGNKPLLRDFEERKDESEELRNRLANLRQNHMELNINLTTIRKKIDNVKTI 855
            E    ++EQ YL+++  LEEL+    +Q  +L+   +EL     + Q+ +  +   + +F+         A  S   R G+   ++++EQ Q  E KKE E+ AVRLENI+LK  L   E +++ +E+L +GL LIDFEQLKIENQT+NEKIEERNEELLKLR K+ ++VQV+TH+KEKL  +  EN  ++T L +IE   A  RD+LT+ KQAR+ LR DN +L  K GLLG   LLRD EE+ D++E L  RL +L+++H  L ++   +R+KI   K  
Sbjct:  274 EAEAPEKEQAYLRHLGMLEELKK---QQADDLQWYHQELGQLKRQCQEKLTRVEKEWRRFQALKKQVVMQAMGSCRMRGGRQAALREVEQIQALEDKKEKEMSAVRLENIQLKQSLVHFETRMRTQEDLTQGLLLIDFEQLKIENQTFNEKIEERNEELLKLRSKVTNSVQVITHVKEKLHFMDMENACKKTQLAEIEAQAALGRDILTKTKQAREGLRTDNIRLNQKCGLLGKDSLLRDLEEKVDKTELLHRRLESLKRHHASLTLSCRGVRQKIREAKAF 552          
The following BLAST results are available for this feature:
BLAST of TCONS_00067826 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD963.885e-4343.62Coiled-coil domain-containing protein 96 OS=Homo s... [more]
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