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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067766 ID=TCONS_00067766|Name=TCONS_00067766|organism=Clytia hemisphaerica|type=transcript|length=2155bp
CCAGCacgaaacaaaatttttgaaatataaccaacttattaatctttttt
taatctGACTAATCAGTGAATTTAATAATGGCCGACAACGAACAAGCTGT
AGGAGGAAGACCTGGAAGCCCTATACCTGAAGAAGTTCAACCTCCAGCAA
AGAGATTCATGCTTCCAGACATAAAATCGGAATCAACATCCTGGGAACTG
TCTGAGgaattggctgaatttttacAGAACAGGAACCAGACCTATCTCCA
AGAAAAGGAACTGGAGGTATTCACTACCATTCAACCACCAAAGAACATTA
AAACTGCCACAAAATTGGATCCTTTCATGAAGGCACTACTGGACAAGAAG
GGTCTTCATAAAATTGTGTCACAAGACAACGAAAACCAGAAAATACACGA
GAGACTATTTCAAGTGTTAGGACCACTGTCTTCAGCATGGCAAAAAATGC
AGGACGTGGTTAACGGTGGTGATGAAGTTGAAGAGATTGATCCTGCGACA
GTTCTGGGAAATTTGAATGATGCTGTTGTCATCTTGGGCCAAGTGATCAA
CAAGGTCACATATGAAAGGAGATTGTCAATACTGGCAGGTTTGAATGACG
TGAAACAGGCCAAGAGCCTTATTAAAGACAACGTTGAGGACCTGAACTCA
GAGTCAAAATTTTTATTCGGTGAATGCTTTCAAAAGCATGTGAAAGCAAC
AGCTAAGGCGCAAGATGCTGCAGAAAAACTCATGGGAAAGTCATCATCAA
CAGTCAGAAGACGTTTTCCACCAAATACTCGGCCCAATCAACAGGGCCCT
TCCACGAACCACATGCCACGTGGAGGGGTGTCAAGAGGTCGTGGTTTTAA
CAGATGGAACAGAGGTAAGAAAGTTTCATCAACCAAACATAACACTCAAG
GACTCACAGGTAGCCAATCAATGGGAACCAGAGAGTCTCAATTTTGTCCA
CCCAAAGCTATCAAATCTTTTtccagaaaattcaaaaatacaaaatattc
cGCAATCAGCGGGCAGGCTAAGGCTCTTTCTAGTAAACTGGAAAATATTG
ACTTCAGATCAGACAATTCTAGAGATTGTGAGCGGGTGGAGACTCCCAAT
AGTGGGCAAACCCCGACAGTGGGGGGAACCAAAACAAATTCCTATGACTC
aggagaaaaaagaaatagtgAGCAAGGAAATAGAGACTATGATACAGAAG
GGTGCCCTGAAAGAGGTACAATCTGTGAAGGACCAATTTCTGTCAACAAT
TTTTGTAAGGCCCAAAAAGGAGCCAAACAAGTTTCGCCCTATtatcaatt
tgaaaaaagtgaactCATACATGCCATACATCCACTTCAAAATGGAAGGG
ATGAAGAATGTGTCAGACCTGTTGAATCAGGGAGACTacatgataaaaat
agatttgaaGGATGCATATTGGCACATCCCAATCCATCCGGAGAGCCAAA
AGTATTTACGTTTTCGAtgggagaaaaaactttacgaAATGTGTGTTCTA
GCCTTTGGGGTAGGCCCAGGCCCACGAATCTTTACAAAATTACTGAAAGT
ACCATTGACAGTCCTAAGGAGGCTGATGATAAAACTAGTGGCATACTTAG
ACGACCTACTGATCATTGGATCGACAAAAGAGGAAGCCATACAAGCAAGG
GATTCAGTGTTATTCCTGCTGCAGAAATTAGGGTTTTCGATAAATTGGGA
AAAATCAGAACTGAAGCCATCACAAGAGATGGAGTTTCTTGGCATGATAA
TAAACAGCAACACAATGACAGTGTGGTTGCCAGGAGAAAAGGTCCACAAA
ATATTGAACCTCTGTCAGGACACTCTGAAACAGAAAGTTATAAGTTTAAG
GAGTTTAGCGAGCCTAATAGGGAAACTACAGGCAACTCTGCCAGCCATAT
CAATGGCACCTATGCAAGTGAGAGCATTGCAACAAGACCTGATAGAGGGA
CAACATCAGAAACTGGGATACGAGGAGGAAATAAAACTCTCGGAGGAATC
CCTAAAGGAACTACAATGGTGGGTGAACAACATAACATTGAGCCAGGGAG
NCTGGAGAAAAAACTGTGTGTTCTAGCCTTTGGGGTAGGCCCAGGCCCAC
GAATCTTTACAAAATTACTGAAAGTACCATTGACAGTCCTAAGGAGGCTG
ATGAT Run BLAST on NCBI protein sequence of TCONS_00067766-protein >TCONS_00067766-protein ID=TCONS_00067766-protein|Name=TCONS_00067766-protein|organism=Clytia hemisphaerica|type=polypeptide|length=692bp
MADNEQAVGGRPGSPIPEEVQPPAKRFMLPDIKSESTSWELSEELAEFLQ
NRNQTYLQEKELEVFTTIQPPKNIKTATKLDPFMKALLDKKGLHKIVSQD
NENQKIHERLFQVLGPLSSAWQKMQDVVNGGDEVEEIDPATVLGNLNDAV
VILGQVINKVTYERRLSILAGLNDVKQAKSLIKDNVEDLNSESKFLFGEC
FQKHVKATAKAQDAAEKLMGKSSSTVRRRFPPNTRPNQQGPSTNHMPRGG
VSRGRGFNRWNRGKKVSSTKHNTQGLTGSQSMGTRESQFCPPKAIKSFSR
KFKNTKYSAISGQAKALSSKLENIDFRSDNSRDCERVETPNSGQTPTVGG
TKTNSYDSGEKRNSEQGNRDYDTEGCPERGTICEGPISVNNFCKAQKGAK
QVSPYYQFEKSELIHAIHPLQNGRDEECVRPVESGRLHDKNRFEGCILAH
PNPSGEPKVFTFSMGEKTLRNVCSSLWGRPRPTNLYKITESTIDSPKEAD
DKTSGILRRPTDHWIDKRGSHTSKGFSVIPAAEIRVFDKLGKIRTEAITR
DGVSWHDNKQQHNDSVVARRKGPQNIEPLSGHSETESYKFKEFSEPNRET
TGNSASHINGTYASESIATRPDRGTTSETGIRGGNKTLGGIPKGTTMVGE
QHNIEPGXLEKKLCVLAFGVGPGPRIFTKLLKVPLTVLRRLM Run BLAST on NCBI transcript from alignment at scaffold_474:25069..27223 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067766 ID=TCONS_00067766|Name=TCONS_00067766|organism=Clytia hemisphaerica|type=transcript|length=2155bp|location=Sequence derived from alignment at scaffold_474:25069..27223 (Clytia hemisphaerica)
ATCATCAGCCTCCTTAGGACTGTCAATGGTACTTTCAGTAATTTTGTAAA
GATTCGTGGGCCTGGGCCTACCCCAAAGGCTAGAACACACAGTTTTTTCT
CCAGNCTCCCTGGCTCAATGTTATGTTGTTCACCCACCATTGTAGTTCCT
TTAGGGATTCCTCCGAGAGTTTTATTTCCTCCTCGTATCCCAGTTTCTGA
TGTTGTCCCTCTATCAGGTCTTGTTGCAATGCTCTCACTTGCATAGGTGC
CATTGATATGGCTGGCAGAGTTGCCTGTAGTTTCCCTATTAGGCTCGCTA
AACTCCTTAAACTTATAACTTTCTGTTTCAGAGTGTCCTGACAGAGGTTC
AATATTTTGTGGACCTTTTCTCCTGGCAACCACACTGTCATTGTGTTGCT
GTTTATTATCATGCCAAGAAACTCCATCTCTTGTGATGGCTTCAGTTCTG
ATTTTTCCCAATTTATCGAAAACCCTAATTTCTGCAGCAGGAATAACACT
GAATCCCTTGCTTGTATGGCTTCCTCTTTTGTCGATCCAATGATCAGTAG
GTCGTCTAAGTATGCCACTAGTTTTATCATCAGCCTCCTTAGGACTGTCA
ATGGTACTTTCAGTAATTTTGTAAAGATTCGTGGGCCTGGGCCTACCCCA
AAGGCTAGAACACACATTtcgtaaagttttttctcccaTCGAAAACGTAA
ATACTTTTGGCTCTCCGGATGGATTGGGATGTGCCAATATGCATCCttca
aatctatttttatcatgtAGTCTCCCTGATTCAACAGGTCTGACACATTC
TTCATCCCTTCCATTTTGAAGTGGATGTATGGCATGTATGagttcacttt
tttcaaattgataATAGGGCGAAACTTGTTTGGCTCCTTTTTGGGCCTTA
CAAAAATTGTTGACAGAAATTGGTCCTTCACAGATTGTACCTCTTTCAGG
GCACCCTTCTGTATCATAGTCTCTATTTCCTTGCTcactatttctttttt
ctcctGAGTCATAGGAATTTGTTTTGGTTCCCCCCACTGTCGGGGTTTGC
CCACTATTGGGAGTCTCCACCCGCTCACAATCTCTAGAATTGTCTGATCT
GAAGTCAATATTTTCCAGTTTACTAGAAAGAGCCTTAGCCTGCCCGCTGA
TTGCggaatattttgtatttttgaattttctggaAAAAGATTTGATAGCT
TTGGGTGGACAAAATTGAGACTCTCTGGTTCCCATTGATTGGCTACCTGT
GAGTCCTTGAGTGTTATGTTTGGTTGATGAAACTTTCTTACCTCTGTTCC
ATCTGTTAAAACCACGACCTCTTGACACCCCTCCACGTGGCATGTGGTTC
GTGGAAGGGCCCTGTTGATTGGGCCGAGTATTTGGTGGAAAACGTCTTCT
GACTGTTGATGATGACTTTCCCATGAGTTTTTCTGCAGCATCTTGCGCCT
TAGCTGTTGCTTTCACATGCTTTTGAAAGCATTCACCGAATAAAAATTTT
GACTCTGAGTTCAGGTCCTCAACGTTGTCTTTAATAAGGCTCTTGGCCTG
TTTCACGTCATTCAAACCTGCCAGTATTGACAATCTCCTTTCATATGTGA
CCTTGTTGATCACTTGGCCCAAGATGACAACAGCATCATTCAAATTTCCC
AGAACTGTCGCAGGATCAATCTCTTCAACTTCATCACCACCGTTAACCAC
GTCCTGCATTTTTTGCCATGCTGAAGACAGTGGTCCTAACACTTGAAATA
GTCTCTCGTGTATTTTCTGGTTTTCGTTGTCTTGTGACACAATTTTATGA
AGACCCTTCTTGTCCAGTAGTGCCTTCATGAAAGGATCCAATTTTGTGGC
AGTTTTAATGTTCTTTGGTGGTTGAATGGTAGTGAATACCTCCAGTTCCT
TTTCTTGGAGATAGGTCTGGTTCCTGTTCTgtaaaaattcagccaattcC
TCAGACAGTTCCCAGGATGTTGATTCCGATTTTATGTCTGGAAGCATGAA
TCTCTTTGCTGGAGGTTGAACTTCTTCAGGTATAGGGCTTCCAGGTCTTC
CTCCTACAGCTTGTTCGTTGTCGGCCATTATTAAATTCACTGATTAGTCa
gattaaaaaaagattaataagttggttatatttcaaaaattttgtttcgt
GCTGG Coding sequence (CDS) from alignment at scaffold_474:25069..27223 >TCONS_00067766 ID=TCONS_00067766|Name=TCONS_00067766|organism=Clytia hemisphaerica|type=CDS|length=2076bp|location=Sequence derived from alignment at scaffold_474:25069..27223 (Clytia hemisphaerica)
CATCAGCCTCCTTAGGACTGTCAATGGTACTTTCAGTAATTTTGTAAAGA
TTCGTGGGCCTGGGCCTACCCCAAAGGCTAGAACACACAGTTTTTTCTCC
AGNCTCCCTGGCTCAATGTTATGTTGTTCACCCACCATTGTAGTTCCTTT
AGGGATTCCTCCGAGAGTTTTATTTCCTCCTCGTATCCCAGTTTCTGATG
TTGTCCCTCTATCAGGTCTTGTTGCAATGCTCTCACTTGCATAGGTGCCA
TTGATATGGCTGGCAGAGTTGCCTGTAGTTTCCCTATTAGGCTCGCTAAA
CTCCTTAAACTTATAACTTTCTGTTTCAGAGTGTCCTGACAGAGGTTCAA
TATTTTGTGGACCTTTTCTCCTGGCAACCACACTGTCATTGTGTTGCTGT
TTATTATCATGCCAAGAAACTCCATCTCTTGTGATGGCTTCAGTTCTGAT
TTTTCCCAATTTATCGAAAACCCTAATTTCTGCAGCAGGAATAACACTGA
ATCCCTTGCTTGTATGGCTTCCTCTTTTGTCGATCCAATGATCAGTAGGT
CGTCTAAGTATGCCACTAGTTTTATCATCAGCCTCCTTAGGACTGTCAAT
GGTACTTTCAGTAATTTTGTAAAGATTCGTGGGCCTGGGCCTACCCCAAA
GGCTAGAACACACATTtcgtaaagttttttctcccaTCGAAAACGTAAAT
ACTTTTGGCTCTCCGGATGGATTGGGATGTGCCAATATGCATCCttcaaa
tctatttttatcatgtAGTCTCCCTGATTCAACAGGTCTGACACATTCTT
CATCCCTTCCATTTTGAAGTGGATGTATGGCATGTATGagttcacttttt
tcaaattgataATAGGGCGAAACTTGTTTGGCTCCTTTTTGGGCCTTACA
AAAATTGTTGACAGAAATTGGTCCTTCACAGATTGTACCTCTTTCAGGGC
ACCCTTCTGTATCATAGTCTCTATTTCCTTGCTcactatttcttttttct
cctGAGTCATAGGAATTTGTTTTGGTTCCCCCCACTGTCGGGGTTTGCCC
ACTATTGGGAGTCTCCACCCGCTCACAATCTCTAGAATTGTCTGATCTGA
AGTCAATATTTTCCAGTTTACTAGAAAGAGCCTTAGCCTGCCCGCTGATT
GCggaatattttgtatttttgaattttctggaAAAAGATTTGATAGCTTT
GGGTGGACAAAATTGAGACTCTCTGGTTCCCATTGATTGGCTACCTGTGA
GTCCTTGAGTGTTATGTTTGGTTGATGAAACTTTCTTACCTCTGTTCCAT
CTGTTAAAACCACGACCTCTTGACACCCCTCCACGTGGCATGTGGTTCGT
GGAAGGGCCCTGTTGATTGGGCCGAGTATTTGGTGGAAAACGTCTTCTGA
CTGTTGATGATGACTTTCCCATGAGTTTTTCTGCAGCATCTTGCGCCTTA
GCTGTTGCTTTCACATGCTTTTGAAAGCATTCACCGAATAAAAATTTTGA
CTCTGAGTTCAGGTCCTCAACGTTGTCTTTAATAAGGCTCTTGGCCTGTT
TCACGTCATTCAAACCTGCCAGTATTGACAATCTCCTTTCATATGTGACC
TTGTTGATCACTTGGCCCAAGATGACAACAGCATCATTCAAATTTCCCAG
AACTGTCGCAGGATCAATCTCTTCAACTTCATCACCACCGTTAACCACGT
CCTGCATTTTTTGCCATGCTGAAGACAGTGGTCCTAACACTTGAAATAGT
CTCTCGTGTATTTTCTGGTTTTCGTTGTCTTGTGACACAATTTTATGAAG
ACCCTTCTTGTCCAGTAGTGCCTTCATGAAAGGATCCAATTTTGTGGCAG
TTTTAATGTTCTTTGGTGGTTGAATGGTAGTGAATACCTCCAGTTCCTTT
TCTTGGAGATAGGTCTGGTTCCTGTTCTgtaaaaattcagccaattcCTC
AGACAGTTCCCAGGATGTTGATTCCGATTTTATGTCTGGAAGCATGAATC
TCTTTGCTGGAGGTTGAACTTCTTCAGGTATAGGGCTTCCAGGTCTTCCT
CCTACAGCTTGTTCGTTGTCGGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067766-exon-scaffold_474-1491911889:25069..27223 | TCONS_00067766-exon-scaffold_474-1491911889:25069..27223 | Clytia hemisphaerica | exon |
| TCONS_00067766-exon-scaffold_474-1510915933:25069..27223 | TCONS_00067766-exon-scaffold_474-1510915933:25069..27223 | Clytia hemisphaerica | exon |
| TCONS_00067766-exon-scaffold_474-1575043694:25069..27223 | TCONS_00067766-exon-scaffold_474-1575043694:25069..27223 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_474 | supercontig | scaffold_474:25069..27223 . |
Blast
The following BLAST results are available for this feature:
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