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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067762 ID=TCONS_00067762|Name=TCONS_00067762|organism=Clytia hemisphaerica|type=transcript|length=1108bp
CGTACACCTCACGAATCTCTGCCATTGAAGAAAGGAACATACAGACAGTT
TTTTAGGCTTGTAACACACAGAGTTTCAGTTTGGTATGAAGATCATTCAA
CCAAAAATCCTAATGGAGTTGTCCCTGATCCAAAGATGACTAGGATAGTG
AGAGGATCGAAATTTGACGAGGGATATGTCACTGTTGTAGGATAATAATC
TTTGTGCACTCATTAATAAAGATGTCACTGTAAACACCTCTCACTCCATT
GTTTCAATGTTGATGGGATGCCAGGCTATATCAAGATTttcatgttattt
ttttctttacataaaaaccaaaacataccttttattttacattttttact
gTCCAAGTTGGTTCATAAGTAATTTGGTGTTCTttaattttatcaatttt
ggaaataacttaATTAAAGAATTTGTTAAAAAACTGGATTGCTAGCCCTT
TTCCCGCCTAACATTTTTGGTTTCTTTGCCTATGGGGGCAAATACCGACA
TGAGTACCTTCCATTTctttactgttttttttttaagtttattaaAAGTT
TGATATTGCACTTTGCAGATTTCATTAAATGGCAAAGTTGAATAATTacg
atttttttaaagacattttttaACTCAAAGTAAACACATACCACTTATAT
TTCTGATCTTATTCAGAAGATAAAAGCTAAATGTGATAAATGTGATAGTT
GCTCATGTTGGAATAATGGACATTTGGCAAATAGGTCCAACCTTTATTTT
TTCCCCTGCAAATTGGTAAAACCTTTATTTTCCCCGCGGCAAAAAAAACG
CATGGCAGTTATAAAAGggttgataaaaatattgaattcaCAAATTTGTT
TAGAAATCTTATATAAATAACATATTTATTCACATATCTTATTGACACAA
TACATTTAgactatttatttttttgatataATAACTTTTTGTATATAGGG
CCGTCCATATGGTAtatacgcactaaggggggagggggtttcttctcagg
gggaggggaggggtcaaatgaaaatgtacgtacacagagaaaattttttt
atagctctttttcgcttgtttttttgtcgacttttacgcttattatacgc
atcaagga Run BLAST on NCBI transcript from alignment at scaffold_473:192784..193891 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067762 ID=TCONS_00067762|Name=TCONS_00067762|organism=Clytia hemisphaerica|type=transcript|length=1108bp|location=Sequence derived from alignment at scaffold_473:192784..193891 (Clytia hemisphaerica)
tccttgatgcgtataataagcgtaaaagtcgacaaaaaaacaagcgaaaa
agagctataaaaaaattttctctgtgtacgtacattttcatttgacccct
cccctccccctgagaagaaaccccctccccccttagtgcgtataTACCAT
ATGGACGGCCCTATATACAAAAAGTTATtatatcaaaaaaataaatagtc
TAAATGTATTGTGTCAATAAGATATGTGAATAAATATGTTATTTATATAA
GATTTCTAAACAAATTTGtgaattcaatatttttatcaaccCTTTTATAA
CTGCCATGCGTTTTTTTTGCCGCGGGGAAAATAAAGGTTTTACCAATTTG
CAGGGGAAAAAATAAAGGTTGGACCTATTTGCCAAATGTCCATTATTCCA
ACATGAGCAACTATCACATTTATCACATTTAGCTTTTATCTTCTGAATAA
GATCAGAAATATAAGTGGTATGTGTTTACTTTGAGTtaaaaaatgtcttt
aaaaaaatcgtAATTATTCAACTTTGCCATTTAATGAAATCTGCAAAGTG
CAATATCAAACTTttaataaacttaaaaaaaaaacagtaaagAAATGGAA
GGTACTCATGTCGGTATTTGCCCCCATAGGCAAAGAAACCAAAAATGTTA
GGCGGGAAAAGGGCTAGCAATCCAGTTTTTTAACAAATTCTTTAATtaag
ttatttccaaaattgataaaattaaAGAACACCAAATTACTTATGAACCA
ACTTGGAcagtaaaaaatgtaaaataaaaggtatgttttggtttttatgt
aaagaaaaaaataacatgaaAATCTTGATATAGCCTGGCATCCCATCAAC
ATTGAAACAATGGAGTGAGAGGTGTTTACAGTGACATCTTTATTAATGAG
TGCACAAAGATTATTATCCTACAACAGTGACATATCCCTCGTCAAATTTC
GATCCTCTCACTATCCTAGTCATCTTTGGATCAGGGACAACTCCATTAGG
ATTTTTGGTTGAATGATCTTCATACCAAACTGAAACTCTGTGTGTTACAA
GCCTAAAAAACTGTCTGTATGTTCCTTTCTTCAATGGCAGAGATTCGTGA
GGTGTACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067762-exon-scaffold_473-1491911889:192784..193891 | TCONS_00067762-exon-scaffold_473-1491911889:192784..193891 | Clytia hemisphaerica | exon |
| TCONS_00067762-exon-scaffold_473-1510915933:192784..193891 | TCONS_00067762-exon-scaffold_473-1510915933:192784..193891 | Clytia hemisphaerica | exon |
| TCONS_00067762-exon-scaffold_473-1575043694:192784..193891 | TCONS_00067762-exon-scaffold_473-1575043694:192784..193891 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_473 | supercontig | scaffold_473:192784..193891 . |
Blast
The following BLAST results are available for this feature:
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