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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067759 ID=TCONS_00067759|Name=TCONS_00067759|organism=Clytia hemisphaerica|type=transcript|length=1002bp
GGTTAAGGCAGTTTTTTTGCACACATAACATATGATGTTTTCAATCATTT
GAGGCGTATCAAACATTAGTGAGGTTTAGAAAGAgcaatttaaaatgaaa
agataaaaaGCAGAAATGAAGACTAAAAGTACTGAAATAGACATGAAATA
GAAAGAAATACGTGTGTCTATGAGTCCTTCGTGGGTTGCAGCTCGAAAGC
TAATTTGTTGATTGCCTCTTCAGTTCTCAGTGTTTTTGTTTCCGAATTTT
CTGTGCGCTGTGTATTTACAATTCCATTGACCGTCCAAACATACTTGCAT
TTATTTGACTTGTGCAGTTTATATCTTGCAGTTTTAAATAGGTGACCATT
CATCTGTGTCAGACTTTCATTCACATAGATTTTATTCTCTTCATTATATC
CGAGAGTTTTAGTGGTGATTTCTTTGGCTCTTTAATGTTCTTTCTAGCAG
TGAAAAAAGTGTTTCTAGACTTACGATTAACAAATTTGACGATGATTCCA
TTTTGTTTTGTCCTGTGTGATAAGTCAATATCGTTTTTCGTGATAGGAAC
TTCAAGTTTTTTAATTAGCTCCATTATGATACCATCTGTATTTTCTTGAT
CTTTCACAGGGATACCATTTACCACACACATTGTACGTCTCCCATATTGC
TCCAAATCATTCATTTCGGCCCTAGCAGTGGCTATTGAATTTTCCAAGTT
CCTCAAGACTTTGGTTTGTTGTAAAAGAGTTTTACTATTTTTGGTATCCA
TGTTGAGAAGGTAGTCCATAGAGTTTTTGGTTTTTGAATTAGCAGCCTCC
ACTTTTTCAATCCGTTTTTCAAGAGATGCGACATTGTCAGCTAGTCCAGA
TATGTTTCCATTAATAACTGAAAATTGACTGTTTATGGCATCAATCTTAG
AAGTCAGTTCATCAAATCCTTCCAATTTACCAATAATGTAGTCAATTTTT
TCATCAGTTGTCCTACTTGACAGATCGTTcatctttttgttgtttttgtt
gc Run BLAST on NCBI protein sequence of TCONS_00067759-protein >TCONS_00067759-protein ID=TCONS_00067759-protein|Name=TCONS_00067759-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
NKNNKKMNDLSSRTTDEKIDYIIGKLEGFDELTSKIDAINSQFSVINGNI
SGLADNVASLEKRIEKVEAANSKTKNSMDYLLNMDTKNSKTLLQQTKVLR
NLENSIATARAEMNDLEQYGRRTMCVVNGIPVKDQENTDGIIMELIKKLE
VPITKNDIDLSHRTKQNGIIVKFVNRKSRNTFFTARKNIKEPKKSPLKLS
DIMKRIKSM Run BLAST on NCBI transcript from alignment at scaffold_473:184196..185197 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067759 ID=TCONS_00067759|Name=TCONS_00067759|organism=Clytia hemisphaerica|type=transcript|length=1002bp|location=Sequence derived from alignment at scaffold_473:184196..185197 (Clytia hemisphaerica)
gcaacaaaaacaacaaaaagatgAACGATCTGTCAAGTAGGACAACTGAT
GAAAAAATTGACTACATTATTGGTAAATTGGAAGGATTTGATGAACTGAC
TTCTAAGATTGATGCCATAAACAGTCAATTTTCAGTTATTAATGGAAACA
TATCTGGACTAGCTGACAATGTCGCATCTCTTGAAAAACGGATTGAAAAA
GTGGAGGCTGCTAATTCAAAAACCAAAAACTCTATGGACTACCTTCTCAA
CATGGATACCAAAAATAGTAAAACTCTTTTACAACAAACCAAAGTCTTGA
GGAACTTGGAAAATTCAATAGCCACTGCTAGGGCCGAAATGAATGATTTG
GAGCAATATGGGAGACGTACAATGTGTGTGGTAAATGGTATCCCTGTGAA
AGATCAAGAAAATACAGATGGTATCATAATGGAGCTAATTAAAAAACTTG
AAGTTCCTATCACGAAAAACGATATTGACTTATCACACAGGACAAAACAA
AATGGAATCATCGTCAAATTTGTTAATCGTAAGTCTAGAAACACTTTTTT
CACTGCTAGAAAGAACATTAAAGAGCCAAAGAAATCACCACTAAAACTCT
CGGATATAATGAAGAGAATAAAATCTATGTGAATGAAAGTCTGACACAGA
TGAATGGTCACCTATTTAAAACTGCAAGATATAAACTGCACAAGTCAAAT
AAATGCAAGTATGTTTGGACGGTCAATGGAATTGTAAATACACAGCGCAC
AGAAAATTCGGAAACAAAAACACTGAGAACTGAAGAGGCAATCAACAAAT
TAGCTTTCGAGCTGCAACCCACGAAGGACTCATAGACACACGTATTTCTT
TCTATTTCATGTCTATTTCAGTACTTTTAGTCTTCATTTCTGCtttttat
cttttcattttaaattgcTCTTTCTAAACCTCACTAATGTTTGATACGCC
TCAAATGATTGAAAACATCATATGTTATGTGTGCAAAAAAACTGCCTTAA
CC Coding sequence (CDS) from alignment at scaffold_473:184196..185197 >TCONS_00067759 ID=TCONS_00067759|Name=TCONS_00067759|organism=Clytia hemisphaerica|type=CDS|length=630bp|location=Sequence derived from alignment at scaffold_473:184196..185197 (Clytia hemisphaerica)
aacaaaaacaacaaaaagatgAACGATCTGTCAAGTAGGACAACTGATGA
AAAAATTGACTACATTATTGGTAAATTGGAAGGATTTGATGAACTGACTT
CTAAGATTGATGCCATAAACAGTCAATTTTCAGTTATTAATGGAAACATA
TCTGGACTAGCTGACAATGTCGCATCTCTTGAAAAACGGATTGAAAAAGT
GGAGGCTGCTAATTCAAAAACCAAAAACTCTATGGACTACCTTCTCAACA
TGGATACCAAAAATAGTAAAACTCTTTTACAACAAACCAAAGTCTTGAGG
AACTTGGAAAATTCAATAGCCACTGCTAGGGCCGAAATGAATGATTTGGA
GCAATATGGGAGACGTACAATGTGTGTGGTAAATGGTATCCCTGTGAAAG
ATCAAGAAAATACAGATGGTATCATAATGGAGCTAATTAAAAAACTTGAA
GTTCCTATCACGAAAAACGATATTGACTTATCACACAGGACAAAACAAAA
TGGAATCATCGTCAAATTTGTTAATCGTAAGTCTAGAAACACTTTTTTCA
CTGCTAGAAAGAACATTAAAGAGCCAAAGAAATCACCACTAAAACTCTCG
GATATAATGAAGAGAATAAAATCTATGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067759-exon-scaffold_473-1491911889:184196..185197 | TCONS_00067759-exon-scaffold_473-1491911889:184196..185197 | Clytia hemisphaerica | exon |
| TCONS_00067759-exon-scaffold_473-1510915933:184196..185197 | TCONS_00067759-exon-scaffold_473-1510915933:184196..185197 | Clytia hemisphaerica | exon |
| TCONS_00067759-exon-scaffold_473-1575043694:184196..185197 | TCONS_00067759-exon-scaffold_473-1575043694:184196..185197 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_473 | supercontig | scaffold_473:184196..185197 . |
Blast
The following BLAST results are available for this feature:
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