TCONS_00067753 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067753
Unique NameTCONS_00067753
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length310

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067753 ID=TCONS_00067753|Name=TCONS_00067753|organism=Clytia hemisphaerica|type=transcript|length=310bp
GCTTGAATGTCATTgttgtttcatcaaaatgaatAGTGATTGCGAACCGG
CCGGATGCGCCACAAACCCCTTCATGAGAGGAAATACATATTCCTCGTCC
CAATGCACGGTCACGTCCTCGAGGGTTAAGGCACTATTCTTAAGTCTCAT
GCAATTAACAATATCTCAATAGTTTGTTTAGTGGTAATATTGAACCTCAA
TTGTCCACATTCCGGTGATGACTCGCGTATCGTTTGGTTTCGTATATCCG
ATTCGCCCATCTGATCGTTAGTCGTTTGCTGTATCGGCTACGGCCTTCGT
GTCTTGTTTT
Run BLAST on NCBI

transcript from alignment at scaffold_473:154316..154625

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067753 ID=TCONS_00067753|Name=TCONS_00067753|organism=Clytia hemisphaerica|type=transcript|length=310bp|location=Sequence derived from alignment at scaffold_473:154316..154625 (Clytia hemisphaerica)
AAAACAAGACACGAAGGCCGTAGCCGATACAGCAAACGACTAACGATCAG
ATGGGCGAATCGGATATACGAAACCAAACGATACGCGAGTCATCACCGGA
ATGTGGACAATTGAGGTTCAATATTACCACTAAACAAACTATTGAGATAT
TGTTAATTGCATGAGACTTAAGAATAGTGCCTTAACCCTCGAGGACGTGA
CCGTGCATTGGGACGAGGAATATGTATTTCCTCTCATGAAGGGGTTTGTG
GCGCATCCGGCCGGTTCGCAATCACTattcattttgatgaaacaacAATG
ACATTCAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042311XLOC_042311Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067753-exon-scaffold_473-1491911889:154316..154625TCONS_00067753-exon-scaffold_473-1491911889:154316..154625Clytia hemisphaericaexon
TCONS_00067753-exon-scaffold_473-1510915933:154316..154625TCONS_00067753-exon-scaffold_473-1510915933:154316..154625Clytia hemisphaericaexon
TCONS_00067753-exon-scaffold_473-1575043694:154316..154625TCONS_00067753-exon-scaffold_473-1575043694:154316..154625Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_473supercontigscaffold_473:154316..154625 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.8089	2.57301	2.11118	0.777877	6.62893	10.1024	18.7097	23.9517	14.2451	9.99297	12.0946	20.7303	5.44272	7.67783	0.461382	1.94905	2.17477	2.26952	0.373241	0	3.5414	1.49026	3.62321	4.02603	6.40856	10.3233	4.33301	5.05764	4.12132	1.19115
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067753 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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