TCONS_00067735 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067735
Unique NameTCONS_00067735
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2005

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067735 ID=TCONS_00067735|Name=TCONS_00067735|organism=Clytia hemisphaerica|type=transcript|length=2005bp
TAGAAGAATGAGATGTAAACTAAAAAGAATATTTACTTTgctgattgttt
ttatttggttGTTGGTGTTGTTGTCTTACTTCCAAgctccaaaagttcaa
aagAACACAATCTTGGCTTCAAGTACATTCGACGAGACAAGTTATATATC
AAAAACGAAATTATCTGAATCTGAAGATCCATACCATAGACACAAATTCA
ACCAACGAATCAGTGACGAGTTGGACAGTGATAGGCCAATCCCTGATACG
CGCCCGCCACAATGTTTAGAGGAGAGTTATGACAAGCGGTTGTCCAGCAC
TTCGATTATCATCACTTTTCATAATGAAGCGAGGTCAGCTTTGCTACGGA
CTATTAAAAGCGTACTGGATAGAACACCACCTCACCTACTAACGGAGATT
ATCCTGGTTGATGATTTTAGTGCCAATGAAAAAGATGGTGCTTTGTTGAA
AGACCTACCTAAAATTGTTTTGATGCGGAACGACAAACGAGAAGGGTTGA
TTCGTTCACGTTTGAAAGGTGTGAGCGTCGCCAAGTCATCCATATTAACA
TTCCTTGATAGCCACTGTGAAGTGAACGTCGGTTGGATTGAACCATTGCT
AGCACAAGTTGAACAGGATCCACTTGCGATAGCTTCACCAGTGATTGACA
TCATCAAAACGGATACGTTGGAATATAAAGCCTCTTCAAACTACTTGAAA
GGAGGATTTGATTGGAACATGCATTTTATTTGGGAACCATtacttgaaaa
agaaatgaaagatcATAAAGCTGATACAACTCACACAATCAGTACACCAG
TGATTGCAGGTGGTCTATTTACTGTTCAGAAACAATGGTTCAATCAACTC
GGACAATACGACCCTCTGCTAGAAATATGGGGTGCGGAAAACTTCGaaat
ttcattcaaaacttGGATGTGTGgtggaagtttgaaaattattccTTGCT
CACGAATTGGTCATATCTTTCGTAAATCTCATCCTTATGAGTTTCCTCTT
GGTAATGGACACACGTACCTTATGAACGTGCGACGTGTTGCCGAAGTTTG
GATGGACCGTTATAAAAGAATATTCTATCGAGCACGTGGTGGAAATATGA
ACGAACCATTACCGAGaatcaaagAACGACGTTTAATTAGAGAAAGACTG
AAATGTCGTCCTTTCGATTGGTATCTGATGGAAGTCTATCCAGAGTTGAG
CAATGGGTAATGTCAGTAACAGGAATGATTCAAAACGAAAAAGACAAATG
TTTATATGCttcaaagaagagaaaaagaatATCTCTCAAAGATTGTGACA
ACTCCGATTTTAATCAGCATTGGAAGTTTATGATTCGTGAACGGTTACGT
CATCAAGCAACAAATCTATGCATCGAAAGGAAATCGGATGGCTCGTTACT
CTTAGCAAGATGTGAAAATTTCAGTCCACAACAGAAATGGTCTTTTACTA
CCAAATTTCTCTTCTAAATTATTGGTGATAGAATGTTCACTTTATCTACC
ATTATTGAGAGTAAAAAGTAAAACGGCTGGTGAAAACGTAGAAGATGTCG
ATTCTCCAACTGTTATGGTAGCAAATTTATGGTCAGAAAATAACGTGGGA
TAAAAAGAAAGTAGATAGGCAAATCATGTGTTGCTGATGAAAGTACGTTT
ATTATACACAAACGAAGACATGAATGAATGAAGGAGTTTATAGATGAAAT
TATTGCGTTTTGGTTTCATCTGACTGATTACTGTACATTAAGTTAACAAC
GTATATGGATTGCTGGCAAGGAAACATTGAAACCGAATGGTagattcaca
aaattgtgtTTAGGGATATTGTGACCACAATCAAAGgataatttgatgaa
ttttatgTTAGGATTGTCTAGATCAGATTGCACCTTGTTTTTTTAGGAAC
ATCAAAgatgaaattgttcttaaagTAGCTCCCTCTTTTTACTCAGAGCC
ATGATTCCTTTAAGAACTATATAGTCTTACATTTCTTATGGGAATAGCTA
GGGAC
Run BLAST on NCBI

transcript from alignment at scaffold_473:169933..179120-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067735 ID=TCONS_00067735|Name=TCONS_00067735|organism=Clytia hemisphaerica|type=transcript|length=9188bp|location=Sequence derived from alignment at scaffold_473:169933..179120- (Clytia hemisphaerica)
TAGAAGAATGAGATGTAAACTAAAAAGAATATTTACTTTGCTGATTGTTT
TTATTTGGTTGTTGGTGTTGTTGTCTTACTTCCAAGCTCCAAAAGTTCAA
AAGGTATAAAGTTTCATTCAAAGATTAGTTTTAAGAATAAAGAAAAAAAT
GTTTAAATTGCAAAATCCATTTATTCCAGACTTTTGCTATTGTTTTCAGC
ATATGTATTTTCAAGGGTCCAAAACACGAGCTTTTGCCCAAAACGATATT
CCTATAATCTTTTAGAACACAATCTTGGCTTCAAGTACATTCGACGAGAC
AAGTTATATATCAAAAACGAAATTATCTGAATCTGAAGATCCATACCATA
GACACAAATTCAACCAACGAATCAGTGACGAGTTGGACAGTGATAGGCCA
ATCCCTGATACGCGCCCGCCACAGTAAAGTTAACAAATTTTTTCCTAAAT
CGGAAATCATTTATTCAAAAAATGTTAAATGCTTTGGGAAAGGTATGTGT
GTTTTTTGGCTACAGAAGGGAAGTTTGCTTTTGAAACTGGCAACTCGAGA
CCTTGCATTATTTAAAACTCTTTCATTTTCAAAGATTAAATGACAGATTA
CCAACTTTCTGTCTGTCCTTACATGGTTTCTTTACTAACCTAACTTCTTA
TGTTTTGTATCTAGATGTTTAGAGGAGAGTTATGACAAGCGGTTGTCCAG
CACTTCGATTATCATCACTTTTCATAATGAAGCGAGGTCAGCTTTGCTAC
GGACTATTAAAAGGTAAATCAAAATACAGTTGTACAGGTAATAAGAATAC
AGGTGTTTTGCTTACAGCCGCAGCGTACTTTTTGCGGCCCGTAGCCTGGC
GACCGGTGACGGTTGAGCGATGAAATTTGGCATGCTTTCCTCCCTCGACA
TGCTTGACGTCTCCAGAAAGTTTCAAGTCCTGGCGACCACCCAGTAGCTG
CCTTTTTCTCTTTTTTTATCCTTACACATTGCTGAAATTTTGCGGTTTCG
TGCTAAGGATCGTTTCTCATGATGATATTCGTACCTTTTGATATTTTTAG
ATTTGTTGTTCTTATACAGTATACGGTGCGGCCTCCGTAATGTTAATGTT
AATGAGCGTAATATCTTTTCTTGATTATCATACATTATTATATCTTATAC
TTTCAGCGTACTGGATAGAACACCACCTCACCTACTAACGGAGATTATCC
TGGTTGATGATTTTAGTGCCAATGGTAAGTGAATGCAAAATTGCGTTCGG
AACAGCCAACTAAAAACTTTGGGGTGTAATTGATGTTTCCATCTAGCTTA
TTTTTCAATTTTTAACCCTTTCTTCCATAGAAAAAGATGGTGCTTTGTTG
AAAGACCTACCTAAAATTGTTTTGATGCGGAACGACAAACGAGAAGGTGT
GTATTCATTTCTTTTCATGGGAACCCATTCTCCCAGTGAAGTTTATTGAA
AATTAACGGATGACGGTGTTTGAAGTAGGAGCTCGCTTTTCTTGTAGCCT
AAAGAATGTAGGTTCAAGCCTAACTTGTATCGACTGTCTTAGCGAGGATC
AAAATGACAATATTAGATATGCGTTTTACTGAATTCTTATTGGAAGAGGC
AGTTTTATAGGGTTGATGTTAGTTCAGACAACGTTCAATTAAAAACTCAG
TAAAATGCGTGAATTGGTCGAATCCTTTAACTCATTTCTAACTTTCCCCT
TTCTTCTTTTTAGGGTTGATTCGTTCACGTTTGAAAGGTGTGAGCGTCGC
CAAGTCATCCATATTAACATTCCTTGATAGCCACTGTGAAGTGAACGTCG
GTTGGATTGAACCATTGCTAGCACAAGTTGAACAGGTTCAAAGATTATCG
CTATAAACCCCAAATCATATGAATAAGATCACAATATTTTAGGTTTAATT
TTTAGAAAATGTTTTCTTCTCAAAACCAAACTCACAAATTAATTCAATGT
TTTGATTGCAACATTTTCGAATCTTTCGAATGCGTGACGCAATTTGATTG
GCAGAAAATAGAACTCGCGCGAAAAACAATGCAACGACTTCCTTTTTTTA
GATGACAAAAAGTGCAACATCAATTCTGCGCGATGTCTTGTCAATATGCC
AAGAAAAGACAATGATAAAAAAAATGTAAAATCCAATCTATTCGTTATTG
TTAATTCTATGATTCAAATTATAGGATCCACTTGCGATAGCTTCACCAGT
GATTGACATCATCAAAACGGATACGTTGGAATATAAAGCCTCTTCAAACT
ACTTGAAAGGAGGTGCATCTGTAATAAATTATTTTTCCTTACAAATGATC
TCTTTAAGATTATAATATCATGGAACTAATGCTTTATTTTAATGAGGAAA
CCGTCACCAAAGAGTAATTTACTAAATTAACTTTACGTTCTTTAAATTTG
TCTCATTAACCCAAATTATAAAGTTTTCTTCCAAATATTTGTTCAATTTT
CACTTTTGTAATTGTAATGAATAACAACACCGAAGTTTAACCTAATTTTA
CTGTACTTTTTTAGTATGAAATAATACCAACTTACTATGCAAAAAAAATC
CTTACAACTAATTCGCTGATGTCATAATCGAGGCCGGGTGAGTATTAGTG
ACCATAATATGAATGTTGGTCTTTACGTGAAAAAGTGAGATCATCGAGTT
TTGAACAATTAGTATGATTTCATGTTCCTAATATTGAATAATCACTCCCT
GACATTACTATTGATCGGGATTTGCATAATTTATCCAGTTTTAATAATTT
GCTACCAAGTGCTTAATGTAAGCAGGTGTGAATCTCGTTTGAATAATATA
TTCACAGATAACTGGTTTAGCCACCACCCCTTTATCCTCACTTTTGCAGC
AATGTCCCTGGCTTATTTATCACTTTCATTTTTCCCGAGAGACTATTAAG
GTAACTAAAGTGTCTAATTGACTGGCGACTAGTGTTTCATCAATGTTTCA
TACATCCTTTCCCTAGGATTTGATTGGAACATGCATTTTATTTGGGAACC
ATTACTTGAAAAAGAAATGAAAGATCATAAAGCTGATACAACTCACACAA
TCAGGTAACAACTTAGAAAAATGACCTATTCTTGAAAACCTCAGAAATAT
TCTAATTCAACTAGCTAGCATTGTTGTCTGAAAGATTTTTAAGCCTTATC
TTTTGTTACAATTAAATATTTCACCACTCTTGGGAATAATACCCGCATGA
ACCCTAAAATATTGAGCTTTTCTAGAAAAGAATTTTCGAAGTATCGAACC
CACTGGATATCCTACTTTATTAGTAAACACCCCCTTGATATCCACTCTTA
AAAACATGATCAACCCCCTAGATATCCTCTCTTATAAAGATGTTTACCCC
TGGATATCGTATTTTTTCCCTGAAAAGACATTTTACCCCCTGGATATCCG
CTCCCTTTTAAATATTTAACTCCCTGGATATCCACTTTTGAACAGAAATA
GTTAACCCCCTGGATATCCGATATCCTCAACAAGGGGTGACACGGAGTAA
TTCTGGAAAAACCCATTTGAAGGTAACTGATTTCTAAAACTTTTATGAAC
TATCATTTGTGTTTAAAACTTTCCCATAGTACACCAGTGATTGCAGGTGG
TCTATTTACTGTTCAGAAACAATGGTTCAATCAACTCGGACAATACGACC
CTCTGCTAGAAATATGGGGTGCGGAAAACTTCGGTAAGATAATCTTTCAT
ACCATTTTTTTGACCTGGACTTCAATCAATCAAGAATTACTTCAGGACAT
AATCTGCGGCTCTTTGGATTCAGAAATTCTCAAAACCTTAAAGTCAACTG
AAGCTCGACCTCGCTAAAGTCAGAAATAAAGAAATTTAAAGATTGATAAA
TCTAGAAAGTCTTTCTTTCTTTTCTTACCTTTTTATAACCAAGATAACTT
TTTCTTTTTCTCAGAAATTTCATTCAAAACTTGGATGTGTGGTGGAAGTT
TGAAAATTATTCCTTGCTCACGAATTGGTCATATCTTTCGTAAATCTCAT
CCTTATGAGTTTCCTCTTGGTAATGGACACACGTACCTTATGTGAGTATT
ATTGATTGGATTCATTGAAAATATTATTCAAGTTTCTTGCCTTGTGTTTC
CTGTAAATCTTTAGTCGATCAAGTATGACCGGTTGTCTATTTCATGCAGA
ATACAATTAAAAAAATTCTCAACCATTAGGAACGTGCGACGTGTTGCCGA
AGTTTGGATGGACCGTTATAAAAGAATATTCTATCGAGCACGTGGTGGAA
ATATGAACGAACCATTACCGAGGTAAAAATTATACCATTAGGAATTTTCA
GCAGCGTTTTTTTTCAGTAGACAGCATTACCCTCGATTTTTGCTGTCCCT
ATCCTTTATTCTTCATTACTCTTTTCCTAGACGTACCTATGTGGTACGTT
CATTATAATGAGTTTCTTAAGGGCTACATACACTACACAATATATTGTCA
GGCAATATATTGATGATATATTGCTGAATGTCGACAATATATTGAAAAGG
TGTGCGCAATATATTGTCAGCTCGATTTGCAATATTCCAACAATAAAGGG
GGATTGTTTACAGAAAGAAAATTCCTTTTTATAATAGAGTACCGTTGTTT
ACTTCGTACAATAAGGTCCGCAAACCATATTGTCGAATATTGTTCGTCAA
TATATTGTGTAGTCTAAGTAGCCCTTTAAGATTTATGAAATTTCGGTTTT
CTTTTTTAGAATCAAAGAACGACGTTTAATTAGAGAAAGACTGAAATGTC
GTCCTTTCGATTGGTATCTGATGGAAGTCTATCCAGAGTTGAGGTAACTT
TTAGGTCTTCGTTTTTATTAATTGATGGATATTTTTGTTTTGACTGAAAA
TTGTCTTTCGGTGCACCAAACGAAAAATAAATCTGCTGCTTGGATTGGTG
GCTTTAGTTCCCCCTTCTGTCAACACGCTACCGTCTCGAAATTATTTAGA
ACCAAGTATCATTTATTTCAGAGTTCCGAATGTTGACGAGTTGGCTTATG
GGGAGATCAAGCAAATTTATAAGGGACAATCGTATTGCTTATCTGAGTCC
AAAACTTCAAAGGTTTTGGCAGTGAAATGTATTCCCAATGTTAAGAAAAT
GGTAAGACTTTTCATTGAAATTATTTTCTCCTGCTGACATGACAGATTGC
GGGAATCGGGCGATCGAAGGCTTTTGAACTAAGCAATGAGACATCTGGTG
GGANGCAGATTGCGGGAATCGGGTGATCGAAGGCTTTTGAACTAAGCAAT
GAGACATCTGGTCGGATTTAAGGTCTTTTTTATCTATTAATTTAGGTACA
GACTATTGTTATTTTTAAGTTTCAATTCATACGTTATTAACTCTCATACT
AGAATAATGTATAATTAAGTTGACTATATTTTGTTATAAACAGTATTTTC
GTAAAGATGCGTCTTTTCTTGCACTATTACTTTTCGCATTTTTTCAACTG
TTTTTCTATCGTTTGTACAAATTGTCAATTTCATTTTCCAAATCGATAGT
TTTTTTTCAACTTCCATTTACCAAGGCTTTTTGTGTTTGCCGTCTTTCCA
ACAGTTTCCAAGATTAGACACACGACCTTTTATGGACGTAAGATGACGTA
TCAGCAATGTTGCGAGGCCAACTGATATCTTTAATGTTGCCTAAGCATTC
AATGTCCGCATTTTCATTTCATTCGATATCAAATTTAATCGTCACTGTAT
CATTATACTGAATATTCAATAATCTATCTTGATTGATGAAGAAAATAGCT
CCAACACTACCACTCATGATGCATTCTCCATGGGGTTTTTCGTAAAGCTT
GAGAAACATTTGATCATAGGAACTTTTAGTAATATCCCAGTCAACCAATT
CACTATTTACCAAAAGCCTCATTTTGATTGTTTTGAATTGCATTGGCCAT
TGGGTCGTGTCATCAAAAGGTCGCTTACTTATCCACAATGACACAGTAAC
GTGAGTCTTCTTCTTGGAAATTTGACGGCTGAAATTCAAGTGCAGCAATG
CTTTGTATGTACCAAAAACAAAGAAAGACGGTGATTCTGTAACGGTGTTG
AATTGTTTGAATTCCTGAAATTTCTGCTGTAGGTTGGGTATAGTCCATAC
GAAAGTGCTTTGAAGGATTTTATCACAGCTTCTCAGCTTTCTTTCTGCAC
AGTGATTTTCACTTTCACTCTTTCTTTCTCGTTGCTGCATTTCGCTCTCA
TCATGTGATCTTTCTGTATCAACATTTTCAATTACTGGTTTCGATCCATT
CTTGATCCTGTTGATCTTCTTTTTGCTTTTGAACACATCAAATCCCATCC
TATGTTTTATGGTTGACTGTAGTATAGCTTTCTTCTTTCCTATAATGAAA
GATTTTTAAGCCTCTAACTTATGTTCACACCTCTTTTAGTGGCTAATACG
CTGGCCTACCATAATGTCTTTATAATTCGTTATGAAATTTGCCTTCCTTC
ATAGACCTCCCTCTAAATTCAAATGAATTGTTTAGAACCGAAAGATTGTC
TTTTTCAAAATCTTTACTCAACCTAGATTGATGTTTATTCGTTTTGGAAC
GACTAATTATGGATTCTATTTTTTTAGGACGACTTTTATCAAAGATAAAC
AAGAAAGCTCTTACCTATTCTCTTTGTAAATTTGAAAGGTCTTTTTTGTC
TTTTCGTTTATTTCTTGATTTCTCTAACATTCATAACTCCTTTACTGAAC
TGAATTGATATATATGGTAGGAGTAGTCCTATACTCATCAAGTTAATGTA
GTTTTCTTCTCCCTAATATGCAAAAAATACCATAACCATATAAAAAATCA
ATAAAAATAGTAACTACCAGTTTGTTTATTTACTTAGGAATAAATAGTTT
GCTAATGTGTTATTTTCAAAATACCCACGATAAAGTAACAAAAATAAAAC
TCAGGGAATTTGATAGTTCGTAGTGTATCACTTCAAGCCAGTCCATAGTA
ACGACAATTTGTAACACATTGTTGCGAAATCACCCTCACCATTCACTGTT
TGATTTCATTTTTCCCACTTCAAATTTTTGTAAATAAGGTATTTTAAATT
TTTTTAAAGAAATCATCTCGTTGCGGTGGCGTTCTGGGAAAAATTTTCTA
GAGGGGCCAAAGTCAATTTTTTAGAATGGTGCCCCCAATCTTCCAAAGTG
GTGCCCCCACCCACCAGTTTTTAAACTTTTATTTGCCGAGGCATAATGAG
GAAGGAAATATTAAGTGGATAAGAGTAGAGTAGAAAATTTTTGAAAATTG
ACTGCCAAGATACCCTAAATTACTAAACAAAAATAGAAAAATTTGACTCT
TGCTAGAGTGAAAAGAAACTTAAAGAAACAATGTGTAATGCGAGTGAAGC
GAACAGAAAAATTTGATGTTTTTTTATTTCAATCTTGTAATAGATTTTCA
TTTAATAATGCTATATTGTACACACAAAAAACTTGTAAATTAGGTAGATT
GCAAAGAAGTTACCAATTAACTTTATTGCAAGTGAATCAAAAACATTGCA
AGTAATTTAAAATTATCTCAGTAAAATTGCTCCTGGGGCGCAATTTAAGG
CGCATAAAGTATGATTTTTAAGATTGGGCGTTTCAATAATCTCTTTTGGC
GCCCCTTGCTCTTCGGCACCCCTTCAAAAAAGGTCCGCTGGCCCCACTGC
CAGAACGCCACTGCTCCTGTAAAAATTTGCGTGCTGGATAGTTCTATACC
TTGGGAAAGTGTTAAGAGGGACAAATCAATTTTATTCCATAAACCCAAAT
TTTTAATTAATTTTGTCTCGAAGCGCCTTTAAAAGATTCCGTGTGATTGA
AAATCTATATTGGACAGGTCAAAAAACCAGTAGAACGATACATGAAACCA
TCGGAGAGGAGGGGCTTTTTGTCTGAGTCACCATAGATCTGTTGTATTTT
CAAGACCAACGATATTTTTGTATTTCACTTGCCAGCAATGGGTAATGTCA
GTAACAGGAATGATTCAAAACGAAAAAGACAAATGTTTATATGCTTCAAA
GAAGAGAAAAAGAATATCTCTCAAAGATTGTGACAACTCCGATTTTAATC
AGGTAAAGTTGTTTTTTTGAAAAAATTTATCCTTTTGAGCGAAAGGTATA
TCCCTCTAAATTTAAATTTGAGTCGCAAAAATGGACATGGCAAAACTTGA
TTTTTAAAAATGCTGAAAAGGCTAGTTCTTGACTACCGGTATTGAATCTC
ACGTATTTCACCAATCAATTTTCTTGTGTCTATTGTTATTGAATCGGGAG
TAACCTCGTGACTAAAAAGTAATACACGCCTTCTTCAGACATTTGAAATT
GGACGCTAATTCTTCCAGTTAAGTCCTCACACTTTATTGACCCACGTTTA
TTTTGCACAAGAGAGTATTTTTCACATTGCCATCGTGTGTCAGCCTTCAA
AATTACAGCAAGGAATTCTACTGACTATATGATAATTTGATGATGTTCTT
GAGTGACTCTGATAACTACAGGGCTTTGTTTACATTTTTTTAACATTCAG
CATTGGAAGTTTATGATTCGTGAACGGTTACGTCATCAAGCAACAAATCT
ATGCATCGAAAGGAAATCGGATGGCTCGTTACTCTTAGCAAGATGTGAAA
ATTTCAGTCCACAACAGAAATGGTCTTTTACTACCAAATTTCTCTTCTAA
ATTATTGGTGATAGAATGTTCACTTTATCTACCATTATTGAGAGTAAAAA
GTAAAACGGCTGGTGAAAACGTAGAAGATGTCGATTCTCCAACTGTTATG
GTAGCAAATTTATGGTCAGAAAATAACGTGGGATAAAAAGAAAGTAGATA
GGCAAATCATGTGTTGCTGATGAAAGTACGTTTATTATACACAAACGAAG
ACATGAATGAATGAAGGAGTTTATAGATGAAATTATTGCGTTTTGGTTTC
ATCTGACTGATTACTGTACATTAAGTTAACAACGTATATGGATTGCTGGC
AAGGAAACATTGAAACCGAATGGTAGATTCACAAAATTGTGTTTAGGGAT
ATTGTGACCACAATCAAAGGATAATTTGATGAATTTTATGTTAGGATTGT
CTAGATCAGATTGCACCTTGTTTTTTTAGGAACATCAAAGATGAAATTGT
TCTTAAAGTAGCTCCCTCTTTTTACTCAGAGCCATGATTCCTTTAAGAAC
TATATAGTCTTACATTTCTTATGGGAATAGCTAGGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042297XLOC_042297Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067735-exon-scaffold_473-1575043694:179018..179120TCONS_00067735-exon-scaffold_473-1575043694:179018..179120Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:178698..178855TCONS_00067735-exon-scaffold_473-1575043694:178698..178855Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:178358..178456TCONS_00067735-exon-scaffold_473-1575043694:178358..178456Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:177897..177964TCONS_00067735-exon-scaffold_473-1575043694:177897..177964Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:177725..177790TCONS_00067735-exon-scaffold_473-1575043694:177725..177790Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:177286..177407TCONS_00067735-exon-scaffold_473-1575043694:177286..177407Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:176859..176946TCONS_00067735-exon-scaffold_473-1575043694:176859..176946Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:176067..176154TCONS_00067735-exon-scaffold_473-1575043694:176067..176154Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:175438..175541TCONS_00067735-exon-scaffold_473-1575043694:175438..175541Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:175080..175206TCONS_00067735-exon-scaffold_473-1575043694:175080..175206Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:174849..174941TCONS_00067735-exon-scaffold_473-1575043694:174849..174941Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:174328..174411TCONS_00067735-exon-scaffold_473-1575043694:174328..174411Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:171069..171185TCONS_00067735-exon-scaffold_473-1575043694:171069..171185Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1575043694:169933..170620TCONS_00067735-exon-scaffold_473-1575043694:169933..170620Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:179018..179120TCONS_00067735-exon-scaffold_473-1510915933:179018..179120Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:178698..178855TCONS_00067735-exon-scaffold_473-1510915933:178698..178855Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:178358..178456TCONS_00067735-exon-scaffold_473-1510915933:178358..178456Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:177897..177964TCONS_00067735-exon-scaffold_473-1510915933:177897..177964Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:177725..177790TCONS_00067735-exon-scaffold_473-1510915933:177725..177790Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:177286..177407TCONS_00067735-exon-scaffold_473-1510915933:177286..177407Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:176859..176946TCONS_00067735-exon-scaffold_473-1510915933:176859..176946Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:176067..176154TCONS_00067735-exon-scaffold_473-1510915933:176067..176154Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:175438..175541TCONS_00067735-exon-scaffold_473-1510915933:175438..175541Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:175080..175206TCONS_00067735-exon-scaffold_473-1510915933:175080..175206Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:174849..174941TCONS_00067735-exon-scaffold_473-1510915933:174849..174941Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:174328..174411TCONS_00067735-exon-scaffold_473-1510915933:174328..174411Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:171069..171185TCONS_00067735-exon-scaffold_473-1510915933:171069..171185Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1510915933:169933..170620TCONS_00067735-exon-scaffold_473-1510915933:169933..170620Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:179018..179120TCONS_00067735-exon-scaffold_473-1491911889:179018..179120Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:178698..178855TCONS_00067735-exon-scaffold_473-1491911889:178698..178855Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:178358..178456TCONS_00067735-exon-scaffold_473-1491911889:178358..178456Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:177897..177964TCONS_00067735-exon-scaffold_473-1491911889:177897..177964Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:177725..177790TCONS_00067735-exon-scaffold_473-1491911889:177725..177790Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:177286..177407TCONS_00067735-exon-scaffold_473-1491911889:177286..177407Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:176859..176946TCONS_00067735-exon-scaffold_473-1491911889:176859..176946Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:176067..176154TCONS_00067735-exon-scaffold_473-1491911889:176067..176154Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:175438..175541TCONS_00067735-exon-scaffold_473-1491911889:175438..175541Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:175080..175206TCONS_00067735-exon-scaffold_473-1491911889:175080..175206Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:174849..174941TCONS_00067735-exon-scaffold_473-1491911889:174849..174941Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:174328..174411TCONS_00067735-exon-scaffold_473-1491911889:174328..174411Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:171069..171185TCONS_00067735-exon-scaffold_473-1491911889:171069..171185Clytia hemisphaericaexon
TCONS_00067735-exon-scaffold_473-1491911889:169933..170620TCONS_00067735-exon-scaffold_473-1491911889:169933..170620Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_473supercontigscaffold_473:169933..179120 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.3006e-05	1.3815	0.451241	2.72174e-06	0.275209	0.201074	0.557884	9.23016e-09	0.787132	2.25	3.25509	1.07112e-05	0.11127	0	0.811967	0.751408	2.12269	3.43299	5.40602e-06	1.22455	0.737539	3.35748e-08	0.906689	0.968211	1.37916	0.995323	1.16196	0.292471	3.42343	3.54371
Blast
[Close]
BLAST of TCONS_00067735 vs. Swiss-Prot (Human)
Match: GLT16 (Polypeptide N-acetylgalactosaminyltransferase 16 OS=Homo sapiens GN=GALNT16 PE=1 SV=2)

HSP 1 Score: 425.631 bits (1093), Expect = 2.547e-140
Identity = 198/362 (54.70%), Postives = 260/362 (71.82%), Query Frame = 2 
Query:  119 SSTFDETSYISKTKLSESEDPYHRHKFNQRISDELDSDRPIPDTRPPQCLEESYDKRLSSTSIIITFHNEARSALLRTIKSVLDRTPPHLLTEIILVDDFSANEKDGALLKDLPKIVLMRNDKREGLIRSRLKGVSVAKSSILTFLDSHCEVNVGWIEPLLAQVEQDPLAIASPVIDIIKTDTLEYKASSNYLKGGFDWNMHFIWEPL-LEKEMKDHKADTTHTISTPVIAGGLFTVQKQWFNQLGQYDPLLEIWGAENFEISFKTWMCGGSLKIIPCSRIGHIFRKSHPYEFPLGNGHTYLMNVRRVAEVWMDRYKRIFYRARGGNMNEPLPXXXXXXXXXXXXXCRPFDWYLMEVYPELS 1201
            S  FDE +Y+S  +L   EDPY +H FNQ  SD+L  DRPI DTR   C   SY   L +TS+IITFHNEARS LLRT+KSVL+RTP +L+ EIILVDDFS++ +D  LL  +PK+  +RND+REGLIRSR++G  VA +++LTFLDSHCEVN  W+ P+L +V++D   + SP+ID+I  D   Y A+S  L+GGFDW++HF WE + LE++M   + D T  I TPVIAGG+F + K WFN LG+YD  ++IWG ENFE+SF+ WMCGGSL+I+PCSR+GH+FRK HPY FP GN  TY+ N +R AEVWMD YK+ +Y AR   + +    +  R   R+++ C+ F WYL  VYPEL+
Sbjct:   65 SKGFDEKAYLSAKQLKAGEDPYRQHAFNQLESDKLSPDRPIRDTRHYSCPSVSYSSDLPATSVIITFHNEARSTLLRTVKSVLNRTPANLIQEIILVDDFSSDPEDCLLLTRIPKVKCLRNDRREGLIRSRVRGADVAAATVLTFLDSHCEVNTEWLPPMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRGGFDWSLHFKWEQIPLEQKMT--RTDPTRPIRTPVIAGGIFVIDKSWFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLEIVPCSRVGHVFRKRHPYNFPEGNALTYIRNTKRTAEVWMDEYKQYYYEARPSAIGKAFGSVATRIEQRKKMNCKSFRWYLENVYPELT 424
The following BLAST results are available for this feature:
BLAST of TCONS_00067735 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLT162.547e-14054.70Polypeptide N-acetylgalactosaminyltransferase 16 O... [more]
back to top