TCONS_00067723 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067723
Unique NameTCONS_00067723
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2161

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067723 ID=TCONS_00067723|Name=TCONS_00067723|organism=Clytia hemisphaerica|type=transcript|length=2161bp
AATGCTTTGAATCTTTTCAAAAAGGAAATAACAAGAGATTCATAATTGGT
GTTCGAATCTATTGTTGTATCATCTAGTATAAATACATACCCCGTAGATA
TCACATGTTATCAAATTCGTCAAGCTCTTCCAAAGAGGAAAATCAATAAT
AATGAAGCTCTACATGAGATTATCATtctttgttttattactggtcaTGG
TTGCCAAAACATATTCACAACTCGCGCCTGATTTTTGTATTGGGAAACCA
CGTTGGAACAACCATCCAACCGATTGTGAAAAATTCGTTCAATGTCTTGC
AAATCAAGCGTTTATTGGTGAATGTCCAGCAGGTTTATATTGGGATAACA
GTTTACCTGCTTGCAATTTTGCGTCTCTTGTTGACTGTGAGACAGGAGTA
ACAACTGAAGCAACGACGGAAAGTACAGAGGCGACAACGGAAAGCACAGA
AGCGACGACAGAAAGCACAGAAGCGACGACGGAAAGCACAGAGGCGACAA
CAGAAAGTACCGAAGCAACAACGGAAAGCACAGAGGCGACGACGGAGAGC
ACAGAAGCGACGACGGAAAGTACAGAAGCAACGACGGAAAGCACAGAGGC
GACAACGGAAAGCACAGAAGCGACAACTGAATCGACAGAGGCAACGACGG
AATCAACAACCGACGGTCCACCACCTCAACCAAATTGTGCTGtttgtcaa
aacaaaaacaacgaTGAAGATTGTAGGTGTATCGGGAAAGACACTCCAGG
ATCCATTCTAAAAGCAAACACACCAAAGCTTGTCATGATTTCATTTGACG
ATGCTGTTACGAATCTAAATTATGCTTTATATGCAGAACTTTTTGATGAC
CGTAAAAATCCCAATGAATGTCCGATATCAACGACTTATTTCGTGTCCGA
TGCAAATACAATCTATAATCGAGTCCGAAATCTTGCTGACAAAGGTCATG
AAATAGCGGTCCATACAATATCTCACCGAACACCAACTACATTCTGGGCG
TCTGCCACCCGCCAACAACTGATCGAAGAAATTGTTGGAATGAAAGAAAA
ACTTGAAGACGAAGGAATCAAGAATGTTTTAGGATATCGAAATCCATTTT
TACAAACGGCTGGAGATCGAACATTTGAAGTATTACACGAAAATGGGTTC
TTATATGATTCAACCTTACCAGTTCTGTTTGATAAGCAATATTGGCCTTA
TACATTCGATAATGGTGGACCTTCACAATGTGTTATCAACCCTTGTCCAA
CCAgCTCCTTCCCAGGACTTTGGGAGATTCCAATGCTTCAAATGAGAGAT
ACAGCTGCAACGTGTTCAATGTTCGACGCTTGCCACAGATATAGCAGCCA
AACTGCTGATGGagttttcgaatttttcaaaacaaactttgatCGACATT
ACGAAACATACACGGCGCCTTTTCCTTTGTTTACTCATGCTTCTTGGATG
ATGCATCCTGCATTTGCATTCAGGAAAAATGGATTCATCAGATTTTTGGA
TTATTTGGAATCACGAGATGACGTTTACTTGGTGAATATTCAGAAAGTCA
TTGATTGGATGAGATCACCAACGCCTTTGGCTGACATAAAAAATGATTCT
GGTCCTTTGAGCTGCTAAAGCATATCGTGAGAACGGGTAACTTTCATCAA
TGGAGGCTAACATGTAtacccctcaaatgaatgacctggctggtcattaa
aatacaaagttaaatcaaaacaaaatggtagagaagaactgcgagtggag
ctgcgcaattaatttgttttgaaagctTTGAtaggtcagtcatttgatgg
ctatgcaagtttccctccactgatgcaagttaatTGTAATAATAGTAATT
GTTAAGTTTAAAATTAAAGTATGAAAACATAATTGCTCTCAACCTGTGGG
GATTGCATACAGCGGGGAATCTTATTCGTTCCAATCACAGAAGGATCTGC
ATTATAAAAATTATCTATTTTTATAACGGTTTCTTGTTGACAGGGGCTGG
GAATAAGTTCGAACCAGGAAAAGATTTGAATATAATACATGTTTCATAGC
GGGAACTGTATTCGAATTCAGGCAACGATTAATTTCTAATTTGAATATGA
CTGGGTCGATTAACCCAAACTTAAAGATAAAATTTTGGAATCGCTTATAT
GTTCAAGAATT
Run BLAST on NCBI

protein sequence of TCONS_00067723-protein

>TCONS_00067723-protein ID=TCONS_00067723-protein|Name=TCONS_00067723-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MKLYMRLSFFVLLLVMVAKTYSQLAPDFCIGKPRWNNHPTDCEKFVQCLA
NQAFIGECPAGLYWDNSLPACNFASLVDCETGVTTEATTESTEATTESTE
ATTESTEATTESTEATTESTEATTESTEATTESTEATTESTEATTESTEA
TTESTEATTESTEATTESTTDGPPPQPNCAVCQNKNNDEDCRCIGKDTPG
SILKANTPKLVMISFDDAVTNLNYALYAELFDDRKNPNECPISTTYFVSD
ANTIYNRVRNLADKGHEIAVHTISHRTPTTFWASATRQQLIEEIVGMKEK
LEDEGIKNVLGYRNPFLQTAGDRTFEVLHENGFLYDSTLPVLFDKQYWPY
TFDNGGPSQCVINPCPTSSFPGLWEIPMLQMRDTAATCSMFDACHRYSSQ
TADGVFEFFKTNFDRHYETYTAPFPLFTHASWMMHPAFAFRKNGFIRFLD
YLESRDDVYLVNIQKVIDWMRSPTPLADIKNDSGPLSC
Run BLAST on NCBI

transcript from alignment at scaffold_473:29098..35097+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067723 ID=TCONS_00067723|Name=TCONS_00067723|organism=Clytia hemisphaerica|type=transcript|length=6000bp|location=Sequence derived from alignment at scaffold_473:29098..35097+ (Clytia hemisphaerica)
AATGCTTTGAATCTTTTCAAAAAGGAAATAACAAGAGATTCATAATTGGT
GTTCGAATCTATTGTTGTATCATCTAGTATAAATACATACCCCGTAGATA
TCACATGTTATCAAATTCGTCAAGCTCTTCCAAAGAGGAAAATCAATAAT
AATGAAGCTCTACATGAGATTATCATtctttgttttattactggtcaTGG
TTGCCAAAACATATTCACAACTCGCGCCTGGTAAGTAACTATATCATCAT
TTCGTTCAAATAAACCCACTTGGTTTGTTTATGTtaagcgaccgtagtac
agtggtagagcatccggctacggttcgcgaGGTTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcgcaaggttgtgggttcaac
ccccagccgggtcataccaaagattccaaaaatggtacttaatgcctctc
tgcttgatgctcagcaacgaagagaaggatcaagggtaagtggagaaatc
cagggagaaagagtggcgccctcccctaccttcgggtagatagctatcga
aagaggagccttcgggtcgcctccgactgcggtcgcagacttacttactt
acttactttatgGTATTGGCGAGATTGGATGTTCATTCTACTTCAGCATA
GAGGTGAATCTCCTTTCTATCATTAAcaacccagccggcacacaacgttt
tcaaaacgttttttttaggtttaaattacgttgtgaaaaaacgcgttgcc
aaaaaacgttttaaaaacgttttttcaacgttgtaGAGAAAACGTGTTAT
TTcataacgtttataaaacgTTGTTGAAACGTTATAATCCAAacgttttt
caaaggttttgctaACAACGTTTACTAAacgttttttctaaacttgattt
aaacgtgatttcgatcaacgttttttaaacgtctataaaacgtttttttg
agaTGAAAGTGTAGTGCCCAagatttatatttgaaatatataaatataac
ctCATCGACTCTCAGCTTTTATCCCAAGAAAATTTCTGAGACTTTACCTA
CCTGCTCTGAGATATAGGAGAGATATTCTAtatatctttttctcttttac
tttattgacttctctttaagtgttaaaaatattttaataaaacgcCCACT
CCCTGTTTGAATACCTCGTAAGATCGCCCACTCGTAGATTCTCTCCGTCA
CGCCCTTTCCAAATTACAAACCCCCCGCACCCGCTCCCTGTCCCGCTCCC
CGTCCCACTCGCCGCCCCCATCGTACGCCGAATTAACAATGGAATGGCTT
CTTTTCTGGACAGCTTTCGAACTTTCGAACgttcaaacgttcgaattcga
aatcacttgtagttcaaaacaaaaatcaaacaaagtaaAGGTTCTGTAAA
AGTTGGATGTTTCATGCACGAAGACTGGAAGAAGCTCTCTTACAAAAATC
AACTAGATAATGTGAGTAGTTTACATTAAactgaaaatgcttttgatatT
TAAGTTAATTCTTAGAGGCTTTATCGGTGTAGCTTATTTCAGGTTTCAAT
TTCTGATGATATTTATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTT
AATTTATACTGATTGTAGATTATCATACCCAGAAAATTATATAGAAAAga
gcattcaaagaaaattcaaatgtgtGTACGGTCTTTATCATAATAGTGCA
ATGAATAGGaattattttggcaaagaaCGTCTTAGAGACGTGTTAGAACT
AatctaaaataacttttaaagacGTTTTTAAGTCGTCTCAGAAACGTACC
ATaccgaaattaataaaattagaACGTCTCGGAAACGTCCTAGAGACGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAAACGTTTTAAAGTGCGACaaatacaacctgaaaaaaacgttttccaaa
cgttgtgaaaaacgttttttaaacgttttttaaacgtttttttgccgGCT
GGGAAAGAGCATCTTGAGACTGGAGATATTATTCTTGAAAAGAACTGTAA
GCATGCTCAGCAGAAATTCAATTATACTGAATAATAACCTCCCCCGGGAG
CGCAACCTTATcatcttctttttatttttaaaatctaaGATTTTTGTATT
GGGAAACCACGTTGGAACAACCATCCAACCGATTGTGAAAAATTCGTTCA
ATGTCTTGCAAATCAAGCGTTTATTGGTGAATGTCCAGCAGGTTTATATT
GGGATAACAGTTTACCTGCTTGCAATTTTGCGTCTCTTGTTGACTGTGAG
ACAGGTTGGTAGCTTTGAGTATAGCTTTTTCAAATTCTAGCTATCTGACA
ATATTTTTTATGCGTATCTATGAGCAAGAATATGAATTAATCTAGGTTTT
GAATTTGTTTGTTATGATAAATTTAGCCTATTCTTTGCCAAGATATATAA
TACGATTTTAAAGTAAGAACTCTTGATCTAAAATTATCATCAGGAGTAAC
AACTGAAGCAACGACGGAAAGTACAGAGGCGACAACGGAAAGCACAGAAG
CGACGACAGAAAGCACAGAAGCGACGACGGAAAGCACAGAGGCGACAACA
GAAAGTACCGAAGCAACAACGGAAAGCACAGAGGCGACGACGGAGAGCAC
AGAAGCGACGACGGAAAGTACAGAAGCAACGACGGAAAGCACAGAGGCGA
CAACGGAAAGCACAGAAGCGACAACTGAATCGACAGAGGCAACGACGGAA
TCAACAACCGACGGTCCACCACCTCAACCAAATTGTGCTGtttgtcaaaa
caaaaacaacgaTGAAGATTGTAGGTGTATCGGGAAAGACACTCCAGGAT
CCATTCTAAAAGCAAACACACCAAAGCTTGTCATGATTTCATTTGACGAT
GCTGTTACGAATCTAAATTATGCTTTATATGCAGAACTTTTTGATGACCG
TAAAAATCCCAATGAATGTCCGATATCAACGACTTATTTCGTGTCCGATG
CAAATACAATCTATAATCGAGTCCGAAATCTTGCTGACAAAGGTAATACA
CTGTTTTGTCAAAGCATCTAGAGTTGAAGTAGAAAACCTTTATTTCTGTG
TACCTGTTTTTATCTCGGTTTTGATCGCACAAGCTCTTTCATAGGTCCAA
AACCATCGATTGCTTTCATAAATTCTATCCCTTTTGGCCAAGAAAAAGTG
GTCTGAAAAGGTTGACTTTTGTGAGTTTATCCGATAATTCCTATATTTTA
GGTTCGTAAATTATACAAGGCTAGGCAATAATAAGGCAAAAGATTATTgt
tcaatcttttcttttcatacAGGTCATGAAATAGCGGTCCATACAATATC
TCACCGAACACCAACTACATTCTGGGCGTCTGCCACCCGCCAACAACTGA
TCGAAGAAATTGTTGGAATGAAAGAAAAACTTGAAGACGAAGGAATCAAG
AATGTTTTAGGATATCGAAATCCATTTTTACAAACGGCTGGAGATCGAAC
ATTTGAAGTATTACACGAAAATGGGTTCTTATATGATTCAACCTTACCAG
TTCTGTTTGATAAGCAATATTGGCCTTATACATTCGATAATGGTGGACCT
TCACAATGTGTTATCAACCCTTGTCCAACCAGTAAGTAAATACACGGAAA
TTACCCGCGGAATTTTTTCCCACCCATAGTAGGATCAGGATGAATATCTA
TCGACATTCCAACAGGAATAGAAATTGTATTTTTCTAAGGTTAAGAAAAT
CTGGTAGGGATGGCAGACCAAATtctgtttcaaatatttcaaaattatgt
GTGCTTGGAAattgatgtttgaaaattttccatagaCCAAGCccaattct
aattttttttaatgctaAACTCAAATATATCTTTTTATGTTGGCTGTTTT
ACCTCGTGTTGGTCACTttataactcaaatgtctcctccCAGCTGGcgca
cgacgttgtttcaacgtttaaataacgttcacaacgtccatataacgtta
aatgaacgttgaaacaacgttgagtGCCAGCTGGGGTTAAGTGAAACAAG
CTTTCTCTTCTCTTCAATTGTTAATACCAATGTAATATTGCATGTAAAGC
AACaacaattaatttaattttaggCTCCTTCCCAGGACTTTGGGAGATTC
CAATGCTTCAAATGAGAGATACAGCTGCAACGTGTTCAATGTTCGACGCT
TGCCACAGATATAGCAGCCAAACTGCTGATGGagttttcgaatttttcaa
aacaaactttgatCGACATTACGAAACATACACGGCGCCTTTTCCTTTGT
TTACTCATGCTTCTTGGATGATGCATCCTGCATTTGCATTCAGGAAAAAT
GGTAAGCACAAaggcttttataaaaaaaaaaaaaaaaagtatttctacGT
CGTCGTCACAAATAGGGACCACTTTATTTACAAACAAGAGTATGCATGAC
CCAGGCCTTTTTAATCGGACCCCTGCAGGTCAGTACTTTGATTAGATTTG
GCCCaattttagtaaatttgggtGGGTGAAAATCAATTCGCAATTAATGC
ATTCTCGAAAACTTTTGGTAATTTAACTTGGACATTTCAAGTAATTTTCA
AATTCGATTTGTATTTTCAGGATTCATCAGATTTTTGGATTATTTGGAAT
CACGAGATGACGTTTACTTGGTGAATATTCAGAAAGTCATTGATTGGATG
AGATCACCAACGCCTTTGGCTGACATAAAAAATGATTCTGGTCCTTTGAG
CTGCTAAAGCATATCGTGAGAACGGGTAACTTTCATCAATGGAGGCTAAC
ATGTAtacccctcaaatgaatgacctggctggtcattaaaatacaaagtt
aaatcaaaacaaaatggtagagaagaactgcgagtggagctgcgcaatta
atttgttttgaaagctTTGAtaggtcagtcatttgatggctatgcaagtt
tccctccactgatgcaagttaatTGTAATAATAGTAATTGTTAAGTTTAA
AATTAAAGTATGAAAACATAATTGCTCTCAACCTGTGGGGATTGCATACA
GCGGGGAATCTTATTCGTTCCAATCACAGAAGGATCTGCATTATAAAAAT
TATCTATTTTTATAACGGTTTCTTGTTGACAGGGGCTGGGAATAAGTTCG
AACCAGGAAAAGATTTGAATATAATACATGTTTCATAGCGGGAACTGTAT
TCGAATTCAGGCAACGATTAATTTCTAATTTGAATATGACTGGGTCGATT
AACCCAAACTTAAAGATAAAATTTTGGAATCGCTTATATGTTCAAGAATT

Coding sequence (CDS) from alignment at scaffold_473:29098..35097+

>TCONS_00067723 ID=TCONS_00067723|Name=TCONS_00067723|organism=Clytia hemisphaerica|type=CDS|length=8802bp|location=Sequence derived from alignment at scaffold_473:29098..35097+ (Clytia hemisphaerica)
ATGAAGCTCTACATGAGATTATCATtctttgttttattactggtcaTGGT
TGCCAAAACATATTCACAACTCGCGCCTGATTTTTGTATTGGGAAACCAC
GTTGGAACAACCATCCAACCGATTGTGAAAAATTCGTTCAATGTCTTGCA
AATCAAGCGTTTATTGGTGAATGTCCAGCAGGTTTATATTGGGATAACAG
TTTACCTGCTTGCAATTTTGCGTCTCTTGTTGACTGTGAGACAGGAGTAA
CAACTGAAGCAACGACGGAAAGTACAGAGGCGACAACGGAAAGCACAGAA
GCGACGACAGAAAGCACAGAAGCGACGACGGAAAGCACAGAGGCGACAAC
AGAAAGTACCGAAGCAACAACGGAAAGCACAGAGGCGACGACGGAGAGCA
CAGAAGCGACGACGGAAAGTACAGAAGCAACGACGGAAAGCACAGAGGCG
ACAACGGAAAGCACAGAAGCGACAACTGAATCGACAGAGGCAACGACGGA
ATCAACAACCGACGGTCCACCACCTCAACCAAATTGTGCTGtttgtcaaa
acaaaaacaacgaTGAAGATTGTAGGTGTATCGGGAAAGACACTCCAGGA
TCCATTCTAAAAGCAAACACACCAAAGCTTGTCATGATTTCATTTGACGA
TGCTGTTACGAATCTAAATTATGCTTTATATGCAGAACTTTTTGATGACC
GTAAAAATCCCAATGAATGTCCGATATCAACGACTTATTTCGTGTCCGAT
GCAAATACAATCTATAATCGAGTCCGAAATCTTGCTGACAAAGGTCATGA
AATAGCGGTCCATACAATATCTCACCGAACACCAACTACATTCTGGGCGT
CTGCCACCCGCCAACAACTGATCGAAGAAATTGTTGGAATGAAAGAAAAA
CTTGAAGACGAAGGAATCAAGAATGTTTTAGGATATCGAAATCCATTTTT
ACAAACGGCTGGAGATCGAACATTTGAAGTATTACACGAAAATGGGTTCT
TATATGATTCAACCTTACCAGTTCTGTTTGATAAGCAATATTGGCCTTAT
ACATTCGATAATGGTGGACCTTCACAATGTGTTATCAACCCTTGTCCAAC
CAgCTCCTTCCCAGGACTTTGGGAGATTCCAATGCTTCAAATGAGAGATA
CAGCTGCAACGTGTTCAATGTTCGACGCTTGCCACAGATATAGCAGCCAA
ACTGCTGATGGagttttcgaatttttcaaaacaaactttgatCGACATTA
CGAAACATACACGGCGCCTTTTCCTTTGTTTACTCATGCTTCTTGGATGA
TGCATCCTGCATTTGCATTCAGGAAAAATGGATTCATCAGATTTTTGGAT
TATTTGGAATCACGAGATGACGTTTACTTGGTGAATATTCAGAAAGTCAT
TGATTGGATGAGATCACCAACGCCTTTGGCTGACATAAAAAATGATTCTG
GTCCTTTGAGCTGCTAAATGAAGCTCTACATGAGATTATCATtctttgtt
ttattactggtcaTGGTTGCCAAAACATATTCACAACTCGCGCCTGATTT
TTGTATTGGGAAACCACGTTGGAACAACCATCCAACCGATTGTGAAAAAT
TCGTTCAATGTCTTGCAAATCAAGCGTTTATTGGTGAATGTCCAGCAGGT
TTATATTGGGATAACAGTTTACCTGCTTGCAATTTTGCGTCTCTTGTTGA
CTGTGAGACAGGAGTAACAACTGAAGCAACGACGGAAAGTACAGAGGCGA
CAACGGAAAGCACAGAAGCGACGACAGAAAGCACAGAAGCGACGACGGAA
AGCACAGAGGCGACAACAGAAAGTACCGAAGCAACAACGGAAAGCACAGA
GGCGACGACGGAGAGCACAGAAGCGACGACGGAAAGTACAGAAGCAACGA
CGGAAAGCACAGAGGCGACAACGGAAAGCACAGAAGCGACAACTGAATCG
ACAGAGGCAACGACGGAATCAACAACCGACGGTCCACCACCTCAACCAAA
TTGTGCTGtttgtcaaaacaaaaacaacgaTGAAGATTGTAGGTGTATCG
GGAAAGACACTCCAGGATCCATTCTAAAAGCAAACACACCAAAGCTTGTC
ATGATTTCATTTGACGATGCTGTTACGAATCTAAATTATGCTTTATATGC
AGAACTTTTTGATGACCGTAAAAATCCCAATGAATGTCCGATATCAACGA
CTTATTTCGTGTCCGATGCAAATACAATCTATAATCGAGTCCGAAATCTT
GCTGACAAAGGTCATGAAATAGCGGTCCATACAATATCTCACCGAACACC
AACTACATTCTGGGCGTCTGCCACCCGCCAACAACTGATCGAAGAAATTG
TTGGAATGAAAGAAAAACTTGAAGACGAAGGAATCAAGAATGTTTTAGGA
TATCGAAATCCATTTTTACAAACGGCTGGAGATCGAACATTTGAAGTATT
ACACGAAAATGGGTTCTTATATGATTCAACCTTACCAGTTCTGTTTGATA
AGCAATATTGGCCTTATACATTCGATAATGGTGGACCTTCACAATGTGTT
ATCAACCCTTGTCCAACCAgCTCCTTCCCAGGACTTTGGGAGATTCCAAT
GCTTCAAATGAGAGATACAGCTGCAACGTGTTCAATGTTCGACGCTTGCC
ACAGATATAGCAGCCAAACTGCTGATGGagttttcgaatttttcaaaaca
aactttgatCGACATTACGAAACATACACGGCGCCTTTTCCTTTGTTTAC
TCATGCTTCTTGGATGATGCATCCTGCATTTGCATTCAGGAAAAATGGAT
TCATCAGATTTTTGGATTATTTGGAATCACGAGATGACGTTTACTTGGTG
AATATTCAGAAAGTCATTGATTGGATGAGATCACCAACGCCTTTGGCTGA
CATAAAAAATGATTCTGGTCCTTTGAGCTGCTAAATGAAGCTCTACATGA
GATTATCATtctttgttttattactggtcaTGGTTGCCAAAACATATTCA
CAACTCGCGCCTGATTTTTGTATTGGGAAACCACGTTGGAACAACCATCC
AACCGATTGTGAAAAATTCGTTCAATGTCTTGCAAATCAAGCGTTTATTG
GTGAATGTCCAGCAGGTTTATATTGGGATAACAGTTTACCTGCTTGCAAT
TTTGCGTCTCTTGTTGACTGTGAGACAGGAGTAACAACTGAAGCAACGAC
GGAAAGTACAGAGGCGACAACGGAAAGCACAGAAGCGACGACAGAAAGCA
CAGAAGCGACGACGGAAAGCACAGAGGCGACAACAGAAAGTACCGAAGCA
ACAACGGAAAGCACAGAGGCGACGACGGAGAGCACAGAAGCGACGACGGA
AAGTACAGAAGCAACGACGGAAAGCACAGAGGCGACAACGGAAAGCACAG
AAGCGACAACTGAATCGACAGAGGCAACGACGGAATCAACAACCGACGGT
CCACCACCTCAACCAAATTGTGCTGtttgtcaaaacaaaaacaacgaTGA
AGATTGTAGGTGTATCGGGAAAGACACTCCAGGATCCATTCTAAAAGCAA
ACACACCAAAGCTTGTCATGATTTCATTTGACGATGCTGTTACGAATCTA
AATTATGCTTTATATGCAGAACTTTTTGATGACCGTAAAAATCCCAATGA
ATGTCCGATATCAACGACTTATTTCGTGTCCGATGCAAATACAATCTATA
ATCGAGTCCGAAATCTTGCTGACAAAGGTCATGAAATAGCGGTCCATACA
ATATCTCACCGAACACCAACTACATTCTGGGCGTCTGCCACCCGCCAACA
ACTGATCGAAGAAATTGTTGGAATGAAAGAAAAACTTGAAGACGAAGGAA
TCAAGAATGTTTTAGGATATCGAAATCCATTTTTACAAACGGCTGGAGAT
CGAACATTTGAAGTATTACACGAAAATGGGTTCTTATATGATTCAACCTT
ACCAGTTCTGTTTGATAAGCAATATTGGCCTTATACATTCGATAATGGTG
GACCTTCACAATGTGTTATCAACCCTTGTCCAACCAgCTCCTTCCCAGGA
CTTTGGGAGATTCCAATGCTTCAAATGAGAGATACAGCTGCAACGTGTTC
AATGTTCGACGCTTGCCACAGATATAGCAGCCAAACTGCTGATGGagttt
tcgaatttttcaaaacaaactttgatCGACATTACGAAACATACACGGCG
CCTTTTCCTTTGTTTACTCATGCTTCTTGGATGATGCATCCTGCATTTGC
ATTCAGGAAAAATGGATTCATCAGATTTTTGGATTATTTGGAATCACGAG
ATGACGTTTACTTGGTGAATATTCAGAAAGTCATTGATTGGATGAGATCA
CCAACGCCTTTGGCTGACATAAAAAATGATTCTGGTCCTTTGAGCTGCTA
AATGAAGCTCTACATGAGATTATCATtctttgttttattactggtcaTGG
TTGCCAAAACATATTCACAACTCGCGCCTGATTTTTGTATTGGGAAACCA
CGTTGGAACAACCATCCAACCGATTGTGAAAAATTCGTTCAATGTCTTGC
AAATCAAGCGTTTATTGGTGAATGTCCAGCAGGTTTATATTGGGATAACA
GTTTACCTGCTTGCAATTTTGCGTCTCTTGTTGACTGTGAGACAGGAGTA
ACAACTGAAGCAACGACGGAAAGTACAGAGGCGACAACGGAAAGCACAGA
AGCGACGACAGAAAGCACAGAAGCGACGACGGAAAGCACAGAGGCGACAA
CAGAAAGTACCGAAGCAACAACGGAAAGCACAGAGGCGACGACGGAGAGC
ACAGAAGCGACGACGGAAAGTACAGAAGCAACGACGGAAAGCACAGAGGC
GACAACGGAAAGCACAGAAGCGACAACTGAATCGACAGAGGCAACGACGG
AATCAACAACCGACGGTCCACCACCTCAACCAAATTGTGCTGtttgtcaa
aacaaaaacaacgaTGAAGATTGTAGGTGTATCGGGAAAGACACTCCAGG
ATCCATTCTAAAAGCAAACACACCAAAGCTTGTCATGATTTCATTTGACG
ATGCTGTTACGAATCTAAATTATGCTTTATATGCAGAACTTTTTGATGAC
CGTAAAAATCCCAATGAATGTCCGATATCAACGACTTATTTCGTGTCCGA
TGCAAATACAATCTATAATCGAGTCCGAAATCTTGCTGACAAAGGTCATG
AAATAGCGGTCCATACAATATCTCACCGAACACCAACTACATTCTGGGCG
TCTGCCACCCGCCAACAACTGATCGAAGAAATTGTTGGAATGAAAGAAAA
ACTTGAAGACGAAGGAATCAAGAATGTTTTAGGATATCGAAATCCATTTT
TACAAACGGCTGGAGATCGAACATTTGAAGTATTACACGAAAATGGGTTC
TTATATGATTCAACCTTACCAGTTCTGTTTGATAAGCAATATTGGCCTTA
TACATTCGATAATGGTGGACCTTCACAATGTGTTATCAACCCTTGTCCAA
CCAgCTCCTTCCCAGGACTTTGGGAGATTCCAATGCTTCAAATGAGAGAT
ACAGCTGCAACGTGTTCAATGTTCGACGCTTGCCACAGATATAGCAGCCA
AACTGCTGATGGagttttcgaatttttcaaaacaaactttgatCGACATT
ACGAAACATACACGGCGCCTTTTCCTTTGTTTACTCATGCTTCTTGGATG
ATGCATCCTGCATTTGCATTCAGGAAAAATGGATTCATCAGATTTTTGGA
TTATTTGGAATCACGAGATGACGTTTACTTGGTGAATATTCAGAAAGTCA
TTGATTGGATGAGATCACCAACGCCTTTGGCTGACATAAAAAATGATTCT
GGTCCTTTGAGCTGCTAAATGAAGCTCTACATGAGATTATCATtctttgt
tttattactggtcaTGGTTGCCAAAACATATTCACAACTCGCGCCTGATT
TTTGTATTGGGAAACCACGTTGGAACAACCATCCAACCGATTGTGAAAAA
TTCGTTCAATGTCTTGCAAATCAAGCGTTTATTGGTGAATGTCCAGCAGG
TTTATATTGGGATAACAGTTTACCTGCTTGCAATTTTGCGTCTCTTGTTG
ACTGTGAGACAGGAGTAACAACTGAAGCAACGACGGAAAGTACAGAGGCG
ACAACGGAAAGCACAGAAGCGACGACAGAAAGCACAGAAGCGACGACGGA
AAGCACAGAGGCGACAACAGAAAGTACCGAAGCAACAACGGAAAGCACAG
AGGCGACGACGGAGAGCACAGAAGCGACGACGGAAAGTACAGAAGCAACG
ACGGAAAGCACAGAGGCGACAACGGAAAGCACAGAAGCGACAACTGAATC
GACAGAGGCAACGACGGAATCAACAACCGACGGTCCACCACCTCAACCAA
ATTGTGCTGtttgtcaaaacaaaaacaacgaTGAAGATTGTAGGTGTATC
GGGAAAGACACTCCAGGATCCATTCTAAAAGCAAACACACCAAAGCTTGT
CATGATTTCATTTGACGATGCTGTTACGAATCTAAATTATGCTTTATATG
CAGAACTTTTTGATGACCGTAAAAATCCCAATGAATGTCCGATATCAACG
ACTTATTTCGTGTCCGATGCAAATACAATCTATAATCGAGTCCGAAATCT
TGCTGACAAAGGTCATGAAATAGCGGTCCATACAATATCTCACCGAACAC
CAACTACATTCTGGGCGTCTGCCACCCGCCAACAACTGATCGAAGAAATT
GTTGGAATGAAAGAAAAACTTGAAGACGAAGGAATCAAGAATGTTTTAGG
ATATCGAAATCCATTTTTACAAACGGCTGGAGATCGAACATTTGAAGTAT
TACACGAAAATGGGTTCTTATATGATTCAACCTTACCAGTTCTGTTTGAT
AAGCAATATTGGCCTTATACATTCGATAATGGTGGACCTTCACAATGTGT
TATCAACCCTTGTCCAACCAgCTCCTTCCCAGGACTTTGGGAGATTCCAA
TGCTTCAAATGAGAGATACAGCTGCAACGTGTTCAATGTTCGACGCTTGC
CACAGATATAGCAGCCAAACTGCTGATGGagttttcgaatttttcaaaac
aaactttgatCGACATTACGAAACATACACGGCGCCTTTTCCTTTGTTTA
CTCATGCTTCTTGGATGATGCATCCTGCATTTGCATTCAGGAAAAATGGA
TTCATCAGATTTTTGGATTATTTGGAATCACGAGATGACGTTTACTTGGT
GAATATTCAGAAAGTCATTGATTGGATGAGATCACCAACGCCTTTGGCTG
ACATAAAAAATGATTCTGGTCCTTTGAGCTGCTAAATGAAGCTCTACATG
AGATTATCATtctttgttttattactggtcaTGGTTGCCAAAACATATTC
ACAACTCGCGCCTGATTTTTGTATTGGGAAACCACGTTGGAACAACCATC
CAACCGATTGTGAAAAATTCGTTCAATGTCTTGCAAATCAAGCGTTTATT
GGTGAATGTCCAGCAGGTTTATATTGGGATAACAGTTTACCTGCTTGCAA
TTTTGCGTCTCTTGTTGACTGTGAGACAGGAGTAACAACTGAAGCAACGA
CGGAAAGTACAGAGGCGACAACGGAAAGCACAGAAGCGACGACAGAAAGC
ACAGAAGCGACGACGGAAAGCACAGAGGCGACAACAGAAAGTACCGAAGC
AACAACGGAAAGCACAGAGGCGACGACGGAGAGCACAGAAGCGACGACGG
AAAGTACAGAAGCAACGACGGAAAGCACAGAGGCGACAACGGAAAGCACA
GAAGCGACAACTGAATCGACAGAGGCAACGACGGAATCAACAACCGACGG
TCCACCACCTCAACCAAATTGTGCTGtttgtcaaaacaaaaacaacgaTG
AAGATTGTAGGTGTATCGGGAAAGACACTCCAGGATCCATTCTAAAAGCA
AACACACCAAAGCTTGTCATGATTTCATTTGACGATGCTGTTACGAATCT
AAATTATGCTTTATATGCAGAACTTTTTGATGACCGTAAAAATCCCAATG
AATGTCCGATATCAACGACTTATTTCGTGTCCGATGCAAATACAATCTAT
AATCGAGTCCGAAATCTTGCTGACAAAGGTCATGAAATAGCGGTCCATAC
AATATCTCACCGAACACCAACTACATTCTGGGCGTCTGCCACCCGCCAAC
AACTGATCGAAGAAATTGTTGGAATGAAAGAAAAACTTGAAGACGAAGGA
ATCAAGAATGTTTTAGGATATCGAAATCCATTTTTACAAACGGCTGGAGA
TCGAACATTTGAAGTATTACACGAAAATGGGTTCTTATATGATTCAACCT
TACCAGTTCTGTTTGATAAGCAATATTGGCCTTATACATTCGATAATGGT
GGACCTTCACAATGTGTTATCAACCCTTGTCCAACCAgCTCCTTCCCAGG
ACTTTGGGAGATTCCAATGCTTCAAATGAGAGATACAGCTGCAACGTGTT
CAATGTTCGACGCTTGCCACAGATATAGCAGCCAAACTGCTGATGGagtt
ttcgaatttttcaaaacaaactttgatCGACATTACGAAACATACACGGC
GCCTTTTCCTTTGTTTACTCATGCTTCTTGGATGATGCATCCTGCATTTG
CATTCAGGAAAAATGGATTCATCAGATTTTTGGATTATTTGGAATCACGA
GATGACGTTTACTTGGTGAATATTCAGAAAGTCATTGATTGGATGAGATC
ACCAACGCCTTTGGCTGACATAAAAAATGATTCTGGTCCTTTGAGCTGCT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042288XLOC_042288Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067723-proteinTCONS_00067723-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067723-exon-scaffold_473-1491911889:29098..29327TCONS_00067723-exon-scaffold_473-1491911889:29098..29327Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1510915933:29098..29327TCONS_00067723-exon-scaffold_473-1510915933:29098..29327Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1575043694:29098..29327TCONS_00067723-exon-scaffold_473-1575043694:29098..29327Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1491911889:31937..32101TCONS_00067723-exon-scaffold_473-1491911889:31937..32101Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1510915933:31937..32101TCONS_00067723-exon-scaffold_473-1510915933:31937..32101Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1575043694:31937..32101TCONS_00067723-exon-scaffold_473-1575043694:31937..32101Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1491911889:32291..32839TCONS_00067723-exon-scaffold_473-1491911889:32291..32839Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1510915933:32291..32839TCONS_00067723-exon-scaffold_473-1510915933:32291..32839Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1575043694:32291..32839TCONS_00067723-exon-scaffold_473-1575043694:32291..32839Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1491911889:33120..33428TCONS_00067723-exon-scaffold_473-1491911889:33120..33428Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1510915933:33120..33428TCONS_00067723-exon-scaffold_473-1510915933:33120..33428Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1575043694:33120..33428TCONS_00067723-exon-scaffold_473-1575043694:33120..33428Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1491911889:33921..34148TCONS_00067723-exon-scaffold_473-1491911889:33921..34148Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1510915933:33921..34148TCONS_00067723-exon-scaffold_473-1510915933:33921..34148Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1575043694:33921..34148TCONS_00067723-exon-scaffold_473-1575043694:33921..34148Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1491911889:34418..35097TCONS_00067723-exon-scaffold_473-1491911889:34418..35097Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1510915933:34418..35097TCONS_00067723-exon-scaffold_473-1510915933:34418..35097Clytia hemisphaericaexon
TCONS_00067723-exon-scaffold_473-1575043694:34418..35097TCONS_00067723-exon-scaffold_473-1575043694:34418..35097Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_473supercontigscaffold_473:29098..35097 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0184369	0	0.0632618	0.0632072	2.81519	1.75632	0.0748246	0.0709384	0.0312741	0.0997546	0.0938981	0.0754088	0.766653	0.633636	0.572514	0	1.907	2.64824	0.102777	0.0642875	0.060519	0.111875	0.0210581	0.0765535	0.376871	0.233303	0	0	0.0209534	0.0213735
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
IPR002509NODB_dom
IPR011330Glyco_hydro/deAcase_b/a-brl
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008061 chitin binding
molecular_function GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067723 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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