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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067714 ID=TCONS_00067714|Name=TCONS_00067714|organism=Clytia hemisphaerica|type=transcript|length=917bp
TACCAATCaagattttctttcttcttataaagGGCGTAACCACAGCCAAC
CAATATGAAGatgtaaaagaaaaatagataagTGGTCCTGGAAATGTCTC
GTCGTGGAGGAGGGATATTTTGAAGAGTTTTTATGCTAGTTATTATTGAT
TGGTGCAGCATGTTCAGTTGAGCAAGAATCATTTCCATATCCACTTCAGT
ATATTCAATACTGGGGTCCAGTGCCTTAATTGCATTTTCTCTAATAAGTC
CATCAGCGGAtgtcaaattttttaatttgtctcTGAGTTTCTTACACACA
TGTGCGCTACTTGGAGCATCTAAGTATTTGACGTGCAATGGAACAATCCA
TGAAGGTCCGTACTGAGCATACATGCGTTCTTTAGCATCTTTATGGCAAG
CAAGTTTCGCCGAGTCCATATAACAAGAGCACATGTCCCTCATTGTTGGT
CTTGCACCTTCATCTGTCATCATCTCGTCTGCAATCCATTCATTGAAAAC
CATATGAACTTGTGGACATCCTTTCACTGTCCAATGGACTTCAGCATATA
TGACATCTGCTGTTTTCCACATTGAAATACCTTTAAAAACTTTACGTAAC
TCGGCGTAAAGTATTCCTTGTGGGATATCAACGTACATATCCACGTCTCC
ATCTGATGATAGACAAGTACTCTCTCTTAACACACCAAGCTCTGTTCCAC
TTCTAGGGAAATAGATGGCTCCCATTCTATCCAACTGTTGCCATAACTGC
TGGTGGATTTTCGAACATCTTGTTGATTTTTTGCGCTCTTGTCCGAAAGT
GCAATTCGGACGTATGAAATCAGGACCTGGTTTAATAGCTGGCCTCCACT
TCAACCTTCGGTGGGGATAATCCGTATAAGTGTTTCTAGCGTTCGCATGC
CACCATCTATGATAAaa Run BLAST on NCBI protein sequence of TCONS_00067714-protein >TCONS_00067714-protein ID=TCONS_00067714-protein|Name=TCONS_00067714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
FYHRWWHANARNTYTDYPHRRLKWRPAIKPGPDFIRPNCTFGQERKKSTR
CSKIHQQLWQQLDRMGAIYFPRSGTELGVLRESTCLSSDGDVDMYVDIPQ
GILYAELRKVFKGISMWKTADVIYAEVHWTVKGCPQVHMVFNEWIADEMM
TDEGARPTMRDMCSCYMDSAKLACHKDAKERMYAQYGPSWIVPLHVKYLD
APSSAHVCKKLRDKLKNLTSADGLIRENAIKALDPSIEYTEVDMEMILAQ
LNMLHQSIITSIKTLQNIPPPRRDISRTTYLFFFYIFILVGCGYALYKKK
ENLDW Run BLAST on NCBI transcript from alignment at scaffold_472:364979..365895 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067714 ID=TCONS_00067714|Name=TCONS_00067714|organism=Clytia hemisphaerica|type=transcript|length=917bp|location=Sequence derived from alignment at scaffold_472:364979..365895 (Clytia hemisphaerica)
ttTTATCATAGATGGTGGCATGCGAACGCTAGAAACACTTATACGGATTA
TCCCCACCGAAGGTTGAAGTGGAGGCCAGCTATTAAACCAGGTCCTGATT
TCATACGTCCGAATTGCACTTTCGGACAAGAGCGCAAAAAATCAACAAGA
TGTTCGAAAATCCACCAGCAGTTATGGCAACAGTTGGATAGAATGGGAGC
CATCTATTTCCCTAGAAGTGGAACAGAGCTTGGTGTGTTAAGAGAGAGTA
CTTGTCTATCATCAGATGGAGACGTGGATATGTACGTTGATATCCCACAA
GGAATACTTTACGCCGAGTTACGTAAAGTTTTTAAAGGTATTTCAATGTG
GAAAACAGCAGATGTCATATATGCTGAAGTCCATTGGACAGTGAAAGGAT
GTCCACAAGTTCATATGGTTTTCAATGAATGGATTGCAGACGAGATGATG
ACAGATGAAGGTGCAAGACCAACAATGAGGGACATGTGCTCTTGTTATAT
GGACTCGGCGAAACTTGCTTGCCATAAAGATGCTAAAGAACGCATGTATG
CTCAGTACGGACCTTCATGGATTGTTCCATTGCACGTCAAATACTTAGAT
GCTCCAAGTAGCGCACATGTGTGTAAGAAACTCAgagacaaattaaaaaa
tttgacaTCCGCTGATGGACTTATTAGAGAAAATGCAATTAAGGCACTGG
ACCCCAGTATTGAATATACTGAAGTGGATATGGAAATGATTCTTGCTCAA
CTGAACATGCTGCACCAATCAATAATAACTAGCATAAAAACTCTTCAAAA
TATCCCTCCTCCACGACGAGACATTTCCAGGACCActtatctatttttct
tttacatCTTCATATTGGTTGGCTGTGGTTACGCCctttataagaagaaa
gaaaatcttGATTGGTA Coding sequence (CDS) from alignment at scaffold_472:364979..365895 >TCONS_00067714 ID=TCONS_00067714|Name=TCONS_00067714|organism=Clytia hemisphaerica|type=CDS|length=915bp|location=Sequence derived from alignment at scaffold_472:364979..365895 (Clytia hemisphaerica)
ttTTATCATAGATGGTGGCATGCGAACGCTAGAAACACTTATACGGATTA
TCCCCACCGAAGGTTGAAGTGGAGGCCAGCTATTAAACCAGGTCCTGATT
TCATACGTCCGAATTGCACTTTCGGACAAGAGCGCAAAAAATCAACAAGA
TGTTCGAAAATCCACCAGCAGTTATGGCAACAGTTGGATAGAATGGGAGC
CATCTATTTCCCTAGAAGTGGAACAGAGCTTGGTGTGTTAAGAGAGAGTA
CTTGTCTATCATCAGATGGAGACGTGGATATGTACGTTGATATCCCACAA
GGAATACTTTACGCCGAGTTACGTAAAGTTTTTAAAGGTATTTCAATGTG
GAAAACAGCAGATGTCATATATGCTGAAGTCCATTGGACAGTGAAAGGAT
GTCCACAAGTTCATATGGTTTTCAATGAATGGATTGCAGACGAGATGATG
ACAGATGAAGGTGCAAGACCAACAATGAGGGACATGTGCTCTTGTTATAT
GGACTCGGCGAAACTTGCTTGCCATAAAGATGCTAAAGAACGCATGTATG
CTCAGTACGGACCTTCATGGATTGTTCCATTGCACGTCAAATACTTAGAT
GCTCCAAGTAGCGCACATGTGTGTAAGAAACTCAgagacaaattaaaaaa
tttgacaTCCGCTGATGGACTTATTAGAGAAAATGCAATTAAGGCACTGG
ACCCCAGTATTGAATATACTGAAGTGGATATGGAAATGATTCTTGCTCAA
CTGAACATGCTGCACCAATCAATAATAACTAGCATAAAAACTCTTCAAAA
TATCCCTCCTCCACGACGAGACATTTCCAGGACCActtatctatttttct
tttacatCTTCATATTGGTTGGCTGTGGTTACGCCctttataagaagaaa
gaaaatcttGATTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067714-exon-scaffold_472-1491911889:364979..365895 | TCONS_00067714-exon-scaffold_472-1491911889:364979..365895 | Clytia hemisphaerica | exon |
| TCONS_00067714-exon-scaffold_472-1510915933:364979..365895 | TCONS_00067714-exon-scaffold_472-1510915933:364979..365895 | Clytia hemisphaerica | exon |
| TCONS_00067714-exon-scaffold_472-1575043694:364979..365895 | TCONS_00067714-exon-scaffold_472-1575043694:364979..365895 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:364979..365895 . |
Blast
The following BLAST results are available for this feature:
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