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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067681 ID=TCONS_00067681|Name=TCONS_00067681|organism=Clytia hemisphaerica|type=transcript|length=1742bp
GTTCGTCTCATTTTACATTGAAAAAGAGAAGGACAACAAAAAAACCTCGT
TAAAAAATCAATCATAACATAAGTAAGCGAGAATAATTTTGATATCTCTT
TTTGATGATAAAACGACAAAGTGTACTGTAGTTAGAGGACTACATAATTG
AACAATTTTATTACTGTAAAAAGACTTCAATCATATGAGTTTATACTTAC
CAAAATGTCTAGCAAAATAAGAGTCTTGATTTATCATGGTTTGGAATCTG
AAGGAGCCCCATTTTTCAATATTGAGTTTCACATGAGTGATACTATAATG
GCTGTAACTGAAATGGTTGGAAGTCTTTTATTTATACCAATGGATCTTAT
ACTTTTGTTTCAAGGAAACAACACTGAAACTGCGCTTCGTAGTTGTACAA
GGATTTCAGAACTTACTTTTGGTTCAAATGTAATCAAACTTTATTTTGGA
TTGAAAACATGTAGGCAATCTATGAAAATTGTCAACCAAAGAAAAGTAAT
AGACCCAACAGACCAAATTAAAATCTTGCAGAGATTAACAGTTAAAGGAT
ATGGGACAGACCGGATTATTACTACAACTTATACTAATCGCACTGTCATT
GAAGTTTATGACTATATAGTGGCTTTAACAGGAATACCGATATATACCCT
TATATTATTATCTGTAGATAAAGAGATACTACAATACAAGGAATACAAGG
AAGATTCcagaataaaaattgaagatatGATTATGTATACTGTTGTCTAt
ttccaagaaaatgaaaaGCTGGAAAATATTTGTCTTCAATATGGAATCAA
ACATCTGAAATCACTCAAATTGAGATTCTTAACAAAAGAAGAAGAGTTGA
ATCCAAGAGAAATGGAATCTATCCAAGACATTAAAAATTATGTTTACAAA
ACACATGATATTCCTCTCCATCAACAAAGTATACTTTTCCAACATCAAGA
GATTGAAAACGATTCGACCAAAATATTTGAtcttttctcacaaaatgaaa
atttcaaaggaGAGATGCATTTTCATGTAGTGATTGATAAAAAGACATTC
AAGATAAGTGTTGAAGGTTGTCATTGGAAAAACGATCGTAAGAAACATTA
TTTAGAGGTCAACGATTCAAATACCATAGCCGAGGTTAAGACGAAAATAC
TTGAGAATTATTATCCAGAGAGGTTAGAATATATTCAGAAACAGCTGAGC
GATCCGGGCTCCATTCTTTCATCGACAAGTACAAAGGTTCCAGCAGATTG
CTTCGTTTTTCGACGATTTAACAACGTTTTCGAAGACTCAAAAACAGTAG
AGGAGTGtaaaattttaccaaatttaAATGATTATGATGATTATGTATTT
GAAGAAACAATCTTAGTCAGGATACGATTGGACTTACTTCAAAAAGGGAA
AGATATTATAGAATATCCTGTAACTAAGTTTCTCTTCGACTTTCACTGTA
ATGAAACTTTGAAGAAATTTCGTTTACAAAACGGAATAGACCGTAAAGAA
CTTCATGTAATGCCACATCAAATAGGTGTGACGAGACATCCAGAATggcc
ttggaaaatacaaaatcTTGAAGGTGAAATTGTTTGCGTTTTGGATTATT
TTGTTGTAAAACGTAATTCAAGCTGTTATATTATgtgaaaagtcaaaata
aagtacgttcgttttttttttcgcgagATATTGctattttttaaaggttt
tgaaaTCACATCAacatttttatgtttataattgTATTATAG Run BLAST on NCBI transcript from alignment at scaffold_472:95802..97543- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067681 ID=TCONS_00067681|Name=TCONS_00067681|organism=Clytia hemisphaerica|type=transcript|length=1742bp|location=Sequence derived from alignment at scaffold_472:95802..97543- (Clytia hemisphaerica)
GTTCGTCTCATTTTACATTGAAAAAGAGAAGGACAACAAAAAAACCTCGT
TAAAAAATCAATCATAACATAAGTAAGCGAGAATAATTTTGATATCTCTT
TTTGATGATAAAACGACAAAGTGTACTGTAGTTAGAGGACTACATAATTG
AACAATTTTATTACTGTAAAAAGACTTCAATCATATGAGTTTATACTTAC
CAAAATGTCTAGCAAAATAAGAGTCTTGATTTATCATGGTTTGGAATCTG
AAGGAGCCCCATTTTTCAATATTGAGTTTCACATGAGTGATACTATAATG
GCTGTAACTGAAATGGTTGGAAGTCTTTTATTTATACCAATGGATCTTAT
ACTTTTGTTTCAAGGAAACAACACTGAAACTGCGCTTCGTAGTTGTACAA
GGATTTCAGAACTTACTTTTGGTTCAAATGTAATCAAACTTTATTTTGGA
TTGAAAACATGTAGGCAATCTATGAAAATTGTCAACCAAAGAAAAGTAAT
AGACCCAACAGACCAAATTAAAATCTTGCAGAGATTAACAGTTAAAGGAT
ATGGGACAGACCGGATTATTACTACAACTTATACTAATCGCACTGTCATT
GAAGTTTATGACTATATAGTGGCTTTAACAGGAATACCGATATATACCCT
TATATTATTATCTGTAGATAAAGAGATACTACAATACAAGGAATACAAGG
AAGATTCCAGAATAAAAATTGAAGATATGATTATGTATACTGTTGTCTAT
TTCCAAGAAAATGAAAAGCTGGAAAATATTTGTCTTCAATATGGAATCAA
ACATCTGAAATCACTCAAATTGAGATTCTTAACAAAAGAAGAAGAGTTGA
ATCCAAGAGAAATGGAATCTATCCAAGACATTAAAAATTATGTTTACAAA
ACACATGATATTCCTCTCCATCAACAAAGTATACTTTTCCAACATCAAGA
GATTGAAAACGATTCGACCAAAATATTTGATCTTTTCTCACAAAATGAAA
ATTTCAAAGGAGAGATGCATTTTCATGTAGTGATTGATAAAAAGACATTC
AAGATAAGTGTTGAAGGTTGTCATTGGAAAAACGATCGTAAGAAACATTA
TTTAGAGGTCAACGATTCAAATACCATAGCCGAGGTTAAGACGAAAATAC
TTGAGAATTATTATCCAGAGAGGTTAGAATATATTCAGAAACAGCTGAGC
GATCCGGGCTCCATTCTTTCATCGACAAGTACAAAGGTTCCAGCAGATTG
CTTCGTTTTTCGACGATTTAACAACGTTTTCGAAGACTCAAAAACAGTAG
AGGAGTGTAAAATTTTACCAAATTTAAATGATTATGATGATTATGTATTT
GAAGAAACAATCTTAGTCAGGATACGATTGGACTTACTTCAAAAAGGGAA
AGATATTATAGAATATCCTGTAACTAAGTTTCTCTTCGACTTTCACTGTA
ATGAAACTTTGAAGAAATTTCGTTTACAAAACGGAATAGACCGTAAAGAA
CTTCATGTAATGCCACATCAAATAGGTGTGACGAGACATCCAGAATGGCC
TTGGAAAATACAAAATCTTGAAGGTGAAATTGTTTGCGTTTTGGATTATT
TTGTTGTAAAACGTAATTCAAGCTGTTATATTATGTGAAAAGTCAAAATA
AAGTACGTTCGTTTTTTTTTTCGCGAGATATTGCTATTTTTTAAAGGTTT
TGAAATCACATCAACATTTTTATGTTTATAATTGTATTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067681-exon-scaffold_472-1575043694:95802..97543 | TCONS_00067681-exon-scaffold_472-1575043694:95802..97543 | Clytia hemisphaerica | exon |
| TCONS_00067681-exon-scaffold_472-1510915933:95802..97543 | TCONS_00067681-exon-scaffold_472-1510915933:95802..97543 | Clytia hemisphaerica | exon |
| TCONS_00067681-exon-scaffold_472-1491911889:95802..97543 | TCONS_00067681-exon-scaffold_472-1491911889:95802..97543 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:95802..97543 - |
Blast
The following BLAST results are available for this feature:
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