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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067677 ID=TCONS_00067677|Name=TCONS_00067677|organism=Clytia hemisphaerica|type=transcript|length=1229bp
CAAGTTTAATAATGACTTATCATAGAAACATTCatatttgatgttattat
tttgttgtgaaagttaATGTTAATGTGACTGAAATATGTCTTGCAAtcga
tgaaaaatatgaaaaacattttctctgtaaaaaaaattattttgaaattt
ctcaatcgcgaaattNATCCAAGTTGCTCCTACCGAATCAGACACTAAAA
AACAAGTCAAATGTTGCCAATAATAAAAGACTTGAATACAATTCCTCGTG
ATTCTGTTTGGACCTAAATTCAATCAGTCAATCTTTAAACTTTTAGGTTC
CAAAGGTTGCTTTGGTGCAATTTTGAGCGATCGTAAATTCAATTttacca
tttaaaaaaagaattgctTGAAATTCTTACACATTTTTCCATTTGAAAGC
TGTAGCGACTGGTAGACTGAATAGGGCTGAAAAATATTGGGAAACTACTC
TTCCATCAAGCAAAACACCTATCGTTTAATTTTAAATACTTCGTGATTCg
caaagtttttttctgtttttgtttcttttctttttttcaatcgaATTTTT
TACACgtcactttttataagaaacaaaaagaattgCTTACGTTAGTTGTG
AATATCTAATAGAAATTATTATTTCTAGTACAGTagtaatttaggctatt
ttttccCTTTTCTTTTAGATAAAGTAAGCAAATTGAATCAAGTACTGACT
AATAGAAATCTCCACATATTCGCTGTATTATTTTAAGTTTTGTTCCGTTT
TACTaatttatgttaatttcagGTACTTGATTCTTTATTTCGTCTGTCGA
AGCGTTGAAAATCTGCTCATTCATCAATTAAACCACACCCTTCTCAAAAT
GTAATTTAAAATTCGGAGATGCCTTGgaatttttacaagatgcttaactg
attggttatttttNttctcaatcgcgaaattaattccgtgaaacttttga
aatcggctcattcgcgaaatttgccattttgaaactctgattcgcgaaat
taaattccgcgaaaatttcttccctttatAAGGTATTagagagtttatgt
atgtgtgtttttcagcgacggagacggtaaggttctaatttgagtagatc
atgaccaactgaggacgacggtaaatcagcacttttaccgtcctcgattt
tgcggggcggaattgcgggtttttccaaatcgcttcagtcactctaccgt
cctcaaaagtgcaaatacataatcTCGGT Run BLAST on NCBI transcript from alignment at scaffold_472:22998..24226- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067677 ID=TCONS_00067677|Name=TCONS_00067677|organism=Clytia hemisphaerica|type=transcript|length=1229bp|location=Sequence derived from alignment at scaffold_472:22998..24226- (Clytia hemisphaerica)
CAAGTTTAATAATGACTTATCATAGAAACATTCATATTTGATGTTATTAT
TTTGTTGTGAAAGTTAATGTTAATGTGACTGAAATATGTCTTGCAATCGA
TGAAAAATATGAAAAACATTTTCTCTGTAAAAAAAATTATTTTGAAATTT
CTCAATCGCGAAATTNATCCAAGTTGCTCCTACCGAATCAGACACTAAAA
AACAAGTCAAATGTTGCCAATAATAAAAGACTTGAATACAATTCCTCGTG
ATTCTGTTTGGACCTAAATTCAATCAGTCAATCTTTAAACTTTTAGGTTC
CAAAGGTTGCTTTGGTGCAATTTTGAGCGATCGTAAATTCAATTTTACCA
TTTAAAAAAAGAATTGCTTGAAATTCTTACACATTTTTCCATTTGAAAGC
TGTAGCGACTGGTAGACTGAATAGGGCTGAAAAATATTGGGAAACTACTC
TTCCATCAAGCAAAACACCTATCGTTTAATTTTAAATACTTCGTGATTCG
CAAAGTTTTTTTCTGTTTTTGTTTCTTTTCTTTTTTTCAATCGAATTTTT
TACACGTCACTTTTTATAAGAAACAAAAAGAATTGCTTACGTTAGTTGTG
AATATCTAATAGAAATTATTATTTCTAGTACAGTAGTAATTTAGGCTATT
TTTTCCCTTTTCTTTTAGATAAAGTAAGCAAATTGAATCAAGTACTGACT
AATAGAAATCTCCACATATTCGCTGTATTATTTTAAGTTTTGTTCCGTTT
TACTAATTTATGTTAATTTCAGGTACTTGATTCTTTATTTCGTCTGTCGA
AGCGTTGAAAATCTGCTCATTCATCAATTAAACCACACCCTTCTCAAAAT
GTAATTTAAAATTCGGAGATGCCTTGGAATTTTTACAAGATGCTTAACTG
ATTGGTTATTTTTNTTCTCAATCGCGAAATTAATTCCGTGAAACTTTTGA
AATCGGCTCATTCGCGAAATTTGCCATTTTGAAACTCTGATTCGCGAAAT
TAAATTCCGCGAAAATTTCTTCCCTTTATAAGGTATTAGAGAGTTTATGT
ATGTGTGTTTTTCAGCGACGGAGACGGTAAGGTTCTAATTTGAGTAGATC
ATGACCAACTGAGGACGACGGTAAATCAGCACTTTTACCGTCCTCGATTT
TGCGGGGCGGAATTGCGGGTTTTTCCAAATCGCTTCAGTCACTCTACCGT
CCTCAAAAGTGCAAATACATAATCTCGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067677-exon-scaffold_472-1575043694:22998..24226 | TCONS_00067677-exon-scaffold_472-1575043694:22998..24226 | Clytia hemisphaerica | exon |
| TCONS_00067677-exon-scaffold_472-1510915933:22998..24226 | TCONS_00067677-exon-scaffold_472-1510915933:22998..24226 | Clytia hemisphaerica | exon |
| TCONS_00067677-exon-scaffold_472-1491911889:22998..24226 | TCONS_00067677-exon-scaffold_472-1491911889:22998..24226 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:22998..24226 - |
Blast
The following BLAST results are available for this feature:
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