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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067636 ID=TCONS_00067636|Name=TCONS_00067636|organism=Clytia hemisphaerica|type=transcript|length=1510bp
ATCATATTCAATGAAAAGCTCCTAAGAATTAACATAGTGACTTAATTTGt
acggatttttttctcacaaaatagtgCAAGTTAATTGTCTTTTTACAATG
AAATAGTCTAAAATACATACTTCGTCGTTGATATATTGTATTCTCCATGG
ATGTTGAGCATCTCTGACTACTCCTCTTTGGTTTGGCATTACATGAAGCC
CCTGACTGCTTATTCCTTCTTGTAAACAAAACGAGGACAAAAAAGttttc
aaggcCTCATTACTGTTAgtatcaaaaagaaatttataaactGGATACTC
TATTATTTCGTCCCCTTTTTGAAGAAGGTCCATACGAATTCGAACCAAGA
TCGTTTCatcaattttgtaattttttatattCAGTGAAATTTTACATTCC
TCTACTGTTTTTGAGTCTTCGAAAACGTCGTTAAATCGTCGAAGAACAAA
GCAATCTGTTGGAACCTTTCTACTTGTCGATGAAAGAATGGAGCTCGGAT
CATTCAGCTGTTTCTGAATATATGCTAACCTCTCTGGATAATGTTTCTCT
AGTATTTTCATCTTAACCTCGGCTATAGTATCTGAACCAGATATTTCAAT
CAAATACTTTCTAGAGTGATTCCGCCGAAAATCTGTATCAACCTCGATCG
TGAATGTTTGCTTAACAATCACAACATGGAAATGCATATCTTTTTCGAAG
CTTGTATTTTGTGAGAAAAGATCGAATATTTTGGTCGAATCGTTTTCAAT
CTCTTGATGTTGGAAAAGTATACTTTGTTGACGATAAAGTATATTATGTG
TTTTGTGAACATAATTTTTAATGTCTTGGATAGATTCTATTTCTCTTGGA
TTCAACTCTTCTTCTTTCGTTAAGAATCTCAATTTGAGCGATTTCAGATG
ATTGATTCCATATTTGAGACAAATATTTtccagtttttcattttctttga
agtAGGCAACAACATACACTTGCAttatttcactttcattttcagttcgT
AAAATTCCTTTTTCTGTTGATAATATCAGGCTTTCAGCAGGCAATCCTGT
AAATGACTCGATATAGTCGTGAATTTCAGCCATATTGCGATCAGTGTAGC
CTGTTGTAATTATTTGACCTGTTCCAAAAGCTTTAACTGTTAATCTccat
aaagttttgattgtGTACGTAGAGTCTACTTGTTTTCTTTCCTGGACAAT
CTCCAGTGATTGTCTACATCTTCTCAGCCCAACATAAAGTTTAATTTCGG
TTTGCTCGGATATTGAATCGTCGTAACCAGTCGCCAGTGTTGAGAGAAGT
GTACTTCCAAGAAGAGGAGTTGTAAAATCCTTACCATTGAATAAAAGTAT
CAAATCTGTTGGTATGGACAGAAATGTGCTTGTACATGATAGAGTTACAC
ATACAAATGATATTCTATCGCTCAGCCTAAAATCAGTCGATTCAAAAAAC
GGAGCTTGATCGGTCTGAAAACAATgataaattgaaactttcacTATGCT
AGACATCGTG Run BLAST on NCBI transcript from alignment at scaffold_472:104757..106539+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067636 ID=TCONS_00067636|Name=TCONS_00067636|organism=Clytia hemisphaerica|type=transcript|length=1783bp|location=Sequence derived from alignment at scaffold_472:104757..106539+ (Clytia hemisphaerica)
ATCATATTCAATGAAAAGCTCCTAAGAATTAACATAGTGACTTAATTTGt
acggatttttttctcacaaaatagtgCAAGTTAATTGTCTTTTTACAATG
AAATAGTCTAAAATACATACTTCGTCGTTGATATATTGTATTCTCCATGG
ATGTTGAGCATCTCTGACTACTCCTCTTTGGTTTGGCATTACATGAAGCC
CCTGACTGCTTATTCCTTCTTGTAAACAAAACGAGGACAAAAAAGGTTTC
GNGTATAATATCTTCTAAATAGTATCATATTCAATGAAAAGCTCCTAAGA
ATTAACATAGTGACTTAATTTGtacggatttttttctcacaaaatagtgC
AAGTTAATTGTCTTTTTACAATGAAATAGTCTAAAATACATACTTCGTCG
TTGATATATTGTATTCTCCATGGATGTTGAGCATCTCTGACTACTCCTCT
TTGGTTTGGCATTACATGAAGCTCCTGACTGCTTATTCTTTCTAGTGAAC
AAAACGTGgacaaaaaagttttcaaggcCTCATTACTGTTAgtatcaaaa
agaaatttataaactGGATACTCTATTATTTCGTCCCCTTTTTGAAGAAG
GTCCATACGAATTCGAACCAAGATCGTTTCatcaattttgtaatttttta
tattCAGTGAAATTTTACATTCCTCTACTGTTTTTGAGTCTTCGAAAACG
TCGTTAAATCGTCGAAGAACAAAGCAATCTGTTGGAACCTTTCTACTTGT
CGATGAAAGAATGGAGCTCGGATCATTCAGCTGTTTCTGAATATATGCTA
ACCTCTCTGGATAATGTTTCTCTAGTATTTTCATCTTAACCTCGGCTATA
GTATCTGAACCAGATATTTCAATCAAATACTTTCTAGAGTGATTCCGCCG
AAAATCTGTATCAACCTCGATCGTGAATGTTTGCTTAACAATCACAACAT
GGAAATGCATATCTTTTTCGAAGCTTGTATTTTGTGAGAAAAGATCGAAT
ATTTTGGTCGAATCGTTTTCAATCTCTTGATGTTGGAAAAGTATACTTTG
TTGACGATAAAGTATATTATGTGTTTTGTGAACATAATTTTTAATGTCTT
GGATAGATTCTATTTCTCTTGGATTCAACTCTTCTTCTTTCGTTAAGAAT
CTCAATTTGAGCGATTTCAGATGATTGATTCCATATTTGAGACAAATATT
TtccagtttttcattttctttgaagtAGGCAACAACATACACTTGCAtta
tttcactttcattttcagttcgTAAAATTCCTTTTTCTGTTGATAATATC
AGGCTTTCAGCAGGCAATCCTGTAAATGACTCGATATAGTCGTGAATTTC
AGCCATATTGCGATCAGTGTAGCCTGTTGTAATTATTTGACCTGTTCCAA
AAGCTTTAACTGTTAATCTccataaagttttgattgtGTACGTAGAGTCT
ACTTGTTTTCTTTCCTGGACAATCTCCAGTGATTGTCTACATCTTCTCAG
CCCAACATAAAGTTTAATTTCGGTTTGCTCGGATATTGAATCGTCGTAAC
CAGTCGCCAGTGTTGAGAGAAGTGTACTTCCAAGAAGAGGAGTTGTAAAA
TCCTTACCATTGAATAAAAGTATCAAATCTGTTGGTATGGACAGAAATGT
GCTTGTACATGATAGAGTTACACATACAAATGATATTCTATCGCTCAGCC
TAAAATCAGTCGATTCAAAAAACGGAGCTTGATCGGTCTGAAAACAATga
taaattgaaactttcacTATGCTAGACATCGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067636-exon-scaffold_472-1491911889:104757..105001 | TCONS_00067636-exon-scaffold_472-1491911889:104757..105001 | Clytia hemisphaerica | exon |
| TCONS_00067636-exon-scaffold_472-1510915933:104757..105001 | TCONS_00067636-exon-scaffold_472-1510915933:104757..105001 | Clytia hemisphaerica | exon |
| TCONS_00067636-exon-scaffold_472-1575043694:104757..105001 | TCONS_00067636-exon-scaffold_472-1575043694:104757..105001 | Clytia hemisphaerica | exon |
| TCONS_00067636-exon-scaffold_472-1491911889:105275..106539 | TCONS_00067636-exon-scaffold_472-1491911889:105275..106539 | Clytia hemisphaerica | exon |
| TCONS_00067636-exon-scaffold_472-1510915933:105275..106539 | TCONS_00067636-exon-scaffold_472-1510915933:105275..106539 | Clytia hemisphaerica | exon |
| TCONS_00067636-exon-scaffold_472-1575043694:105275..106539 | TCONS_00067636-exon-scaffold_472-1575043694:105275..106539 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:104757..106539 + |
Blast
The following BLAST results are available for this feature:
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