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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067624 ID=TCONS_00067624|Name=TCONS_00067624|organism=Clytia hemisphaerica|type=transcript|length=906bp
AAAGTTTCGAGATTTAGTGTCTATTATCTTTCTTAAAATATAAATGCTTA
AACCATCAATCAACTGATATTTACTTTATAaagtattttgaataaaatat
ccggtcaaaaaaatgcaagatTTGTGGGGgttaacaaaaattttaaatga
gcACAAAAGATTATAGTTTAAGCTCCAAACATGTTGTGGCAAATAAACAC
CAATGTTATCTGTAGATTCCAACACACTCATGAAAAAGATCATCCTTAAT
CAGACCATGTTTTAATGAGAAAAAATAACACTCAGACAGTCTTTCATCTT
CGATGTACAATCTATTGAAGTGGCTTGCTTGTAAATCAACACCTTCATGA
TTGTCAGAAAATGGAACTATTGAATCTAAATCAAAAACATCTTCTTTTCG
TGAACCATTGAATGTTAATCTTGATATCTTAAcaaggttttcattaaaat
tgactttcatttcaCCAATAACTTTTGTTGCAAAGTAACTGAACACAATG
AAAACCAAAGACGTTCCAAAACAACCGCCAACAGCTGaataaaaaagttc
ttttgaaatGACTTTATCAACATATTGTTGATGTAATGGAAAACAAAATC
CAGCCATCAATCCAATCTGATAGATTTTGAATCTTGATATTAGCCTCAAA
TGTTTTATGGATGGTAATTTGTAGATTGTTTGCCAATCATCCCTATCTTT
GGGGGATAATTTTACTTCTTGGGAGCTTTTGGTTAGTACAGGAAAACATA
CTGAAAACTGTCTAGTAAGCAGGTTGATCTGAAATGGTAAGGGGCACAAA
TTTTTTACGCTGAATCTGAACATTACCTTTTTTTAATCTGAAATATAACA
AaacggaaaaaaattaaaatttcttgaaaacacAGCAAAATCAGAAAGCA
TAAGAA Run BLAST on NCBI protein sequence of TCONS_00067624-protein >TCONS_00067624-protein ID=TCONS_00067624-protein|Name=TCONS_00067624-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
MFRFSVKNLCPLPFQINLLTRQFSVCFPVLTKSSQEVKLSPKDRDDWQTI
YKLPSIKHLRLISRFKIYQIGLMAGFCFPLHQQYVDKVISKELFYSAVGG
CFGTSLVFIVFSYFATKVIGEMKVNFNENLVKISRLTFNGSRKEDVFDLD
SIVPFSDNHEGVDLQASHFNRLYIEDERLSECYFFSLKHGLIKDDLFHEC
VGIYR Run BLAST on NCBI transcript from alignment at scaffold_471:341237..342142 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067624 ID=TCONS_00067624|Name=TCONS_00067624|organism=Clytia hemisphaerica|type=transcript|length=906bp|location=Sequence derived from alignment at scaffold_471:341237..342142 (Clytia hemisphaerica)
TTCTTATGCTTTCTGATTTTGCTgtgttttcaagaaattttaattttttt
ccgttTTGTTATATTTCAGATTAAAAAAAGGTAATGTTCAGATTCAGCGT
AAAAAATTTGTGCCCCTTACCATTTCAGATCAACCTGCTTACTAGACAGT
TTTCAGTATGTTTTCCTGTACTAACCAAAAGCTCCCAAGAAGTAAAATTA
TCCCCCAAAGATAGGGATGATTGGCAAACAATCTACAAATTACCATCCAT
AAAACATTTGAGGCTAATATCAAGATTCAAAATCTATCAGATTGGATTGA
TGGCTGGATTTTGTTTTCCATTACATCAACAATATGTTGATAAAGTCatt
tcaaaagaacttttttattCAGCTGTTGGCGGTTGTTTTGGAACGTCTTT
GGTTTTCATTGTGTTCAGTTACTTTGCAACAAAAGTTATTGGtgaaatga
aagtcaattttaatgaaaaccttgTTAAGATATCAAGATTAACATTCAAT
GGTTCACGAAAAGAAGATGTTTTTGATTTAGATTCAATAGTTCCATTTTC
TGACAATCATGAAGGTGTTGATTTACAAGCAAGCCACTTCAATAGATTGT
ACATCGAAGATGAAAGACTGTCTGAGTGTTATTTTTTCTCATTAAAACAT
GGTCTGATTAAGGATGATCTTTTTCATGAGTGTGTTGGAATCTACAGATA
ACATTGGTGTTTATTTGCCACAACATGTTTGGAGCTTAAACTATAATCTT
TTGTgctcatttaaaatttttgttaacCCCCACAAatcttgcattttttt
gaccggatattttattcaaaatacttTATAAAGTAAATATCAGTTGATTG
ATGGTTTAAGCATTTATATTTTAAGAAAGATAATAGACACTAAATCTCGA
AACTTT Coding sequence (CDS) from alignment at scaffold_471:341237..342142 >TCONS_00067624 ID=TCONS_00067624|Name=TCONS_00067624|organism=Clytia hemisphaerica|type=CDS|length=618bp|location=Sequence derived from alignment at scaffold_471:341237..342142 (Clytia hemisphaerica)
ATGTTCAGATTCAGCGTAAAAAATTTGTGCCCCTTACCATTTCAGATCAA
CCTGCTTACTAGACAGTTTTCAGTATGTTTTCCTGTACTAACCAAAAGCT
CCCAAGAAGTAAAATTATCCCCCAAAGATAGGGATGATTGGCAAACAATC
TACAAATTACCATCCATAAAACATTTGAGGCTAATATCAAGATTCAAAAT
CTATCAGATTGGATTGATGGCTGGATTTTGTTTTCCATTACATCAACAAT
ATGTTGATAAAGTCatttcaaaagaacttttttattCAGCTGTTGGCGGT
TGTTTTGGAACGTCTTTGGTTTTCATTGTGTTCAGTTACTTTGCAACAAA
AGTTATTGGtgaaatgaaagtcaattttaatgaaaaccttgTTAAGATAT
CAAGATTAACATTCAATGGTTCACGAAAAGAAGATGTTTTTGATTTAGAT
TCAATAGTTCCATTTTCTGACAATCATGAAGGTGTTGATTTACAAGCAAG
CCACTTCAATAGATTGTACATCGAAGATGAAAGACTGTCTGAGTGTTATT
TTTTCTCATTAAAACATGGTCTGATTAAGGATGATCTTTTTCATGAGTGT
GTTGGAATCTACAGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067624-exon-scaffold_471-1491911889:341237..342142 | TCONS_00067624-exon-scaffold_471-1491911889:341237..342142 | Clytia hemisphaerica | exon |
| TCONS_00067624-exon-scaffold_471-1510915933:341237..342142 | TCONS_00067624-exon-scaffold_471-1510915933:341237..342142 | Clytia hemisphaerica | exon |
| TCONS_00067624-exon-scaffold_471-1575043694:341237..342142 | TCONS_00067624-exon-scaffold_471-1575043694:341237..342142 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_471 | supercontig | scaffold_471:341237..342142 . |
Blast
The following BLAST results are available for this feature:
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