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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067617 ID=TCONS_00067617|Name=TCONS_00067617|organism=Clytia hemisphaerica|type=transcript|length=997bp
CATTTTTTAAACAGAAAATCGAAAGACCGAGAGTTCCTATCGAAATTTTG
GCGAGAGCCAGTGAGACGTTACGAAGCAAGAGGTATTTCAAaggaaaaga
tattttttcaGTTATATTATTCATTCCCATTTTTAATACAGAAAATCGAA
AGAGCGAGTTTCTGTCGAAATTTTGGTCGAGCGAGAGCCAGTGAGACGTT
GCGAAGCAAGAGGTATTTCAAACGAAAAGATATTTTTTCAGTTATATTAT
TCATTCCCATTTTTAATACAGAAAATCGAAAGACCGAGAGTTCTGGTTGA
CGTCTTGGTCAGAGAGCCAGCGAGACACTACGAAGCAAGAggtatttcaa
acaaaaagatatttttcccATGACAGAACAATGACTATTGCAAATACCGA
AAACAGGATAGGTCTTGTCTATCatctaatataatttttaacatgccatt
aacttttttgggagaaATTGTTAAGCTTCTTTTATTCTAATCTATAAGAA
TTGGCGaatattttaaactttcagCATGTTTAGATAATGGGTATGAAAAT
TCAAGGCTAAATTTGATAATGGGCAAATATCTAGTTTCTGGAAAAGGCAA
CAATTCAAgacagggtgtctacggattttttttcgggATTTTCAAGGTTT
TCAAGGTTTTTTTGGTCATTTTAAAGTGGTTTTTCAAGGTTTTTTGGCAA
AAACTTTGGCACgtttcaaggttttttgatactcagttgatatggctctt
tacaggaattttttttttttcagagtggtaggtgaaagaaaaatagagga
cagcaaataaaattctttcgcttttggtgcccggggaattacttccacag
ttaaattcctatctccctctcgagaacaataccagaaaaataaaaactcc
agctccctagtcttccaactgtagaaataaagaattagaagcaaaaccaa
ttgtttacagtgaccgaagaggcgcaaccatggtttgcgccgacgNN Run BLAST on NCBI protein sequence of TCONS_00067617-protein >TCONS_00067617-protein ID=TCONS_00067617-protein|Name=TCONS_00067617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=99bp
HFLNRKSKDREFLSKFWREPVRRYEARGISKEKIFFQLYYSFPFLIQKIE
RASFCRNFGRARASETLRSKRYFKRKDIFSVILFIPIFNTENRKTESSG Run BLAST on NCBI transcript from alignment at scaffold_471:281878..282874 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067617 ID=TCONS_00067617|Name=TCONS_00067617|organism=Clytia hemisphaerica|type=transcript|length=997bp|location=Sequence derived from alignment at scaffold_471:281878..282874 (Clytia hemisphaerica)
NNcgtcggcgcaaaccatggttgcgcctcttcggtcactgtaaacaattg
gttttgcttctaattctttatttctacagttggaagactagggagctgga
gtttttatttttctggtattgttctcgagagggagataggaatttaactg
tggaagtaattccccgggcaccaaaagcgaaagaattttatttgctgtcc
tctatttttctttcacctaccactctgaaaaaaaaaaaattcctgtaaag
agccatatcaactgagtatcaaaaaaccttgaaacGTGCCAAAGTTTTTG
CCAAAAAACCTTGAAAAACCACTTTAAAATGACCAAAAAAACCTTGAAAA
CCTTGAAAATcccgaaaaaaaatccgtagacaccctgtcTTGAATTGTTG
CCTTTTCCAGAAACTAGATATTTGCCCATTATCAAATTTAGCCTTGAATT
TTCATACCCATTATCTAAACATGctgaaagtttaaaatattCGCCAATTC
TTATAGATTAGAATAAAAGAAGCTTAACAATttctcccaaaaaagttaat
ggcatgttaaaaattatattagatGATAGACAAGACCTATCCTGTTTTCG
GTATTTGCAATAGTCATTGTTCTGTCATgggaaaaatatctttttgtttg
aaataccTCTTGCTTCGTAGTGTCTCGCTGGCTCTCTGACCAAGACGTCA
ACCAGAACTCTCGGTCTTTCGATTTTCTGTATTAAAAATGGGAATGAATA
ATATAACTGAAAAAATATCTTTTCGTTTGAAATACCTCTTGCTTCGCAAC
GTCTCACTGGCTCTCGCTCGACCAAAATTTCGACAGAAACTCGCTCTTTC
GATTTTCTGTATTAAAAATGGGAATGAATAATATAACtgaaaaaatatct
tttcctTTGAAATACCTCTTGCTTCGTAACGTCTCACTGGCTCTCGCCAA
AATTTCGATAGGAACTCTCGGTCTTTCGATTTTCTGTTTAAAAAATG Coding sequence (CDS) from alignment at scaffold_471:281878..282874 >TCONS_00067617 ID=TCONS_00067617|Name=TCONS_00067617|organism=Clytia hemisphaerica|type=CDS|length=300bp|location=Sequence derived from alignment at scaffold_471:281878..282874 (Clytia hemisphaerica)
TCAACCAGAACTCTCGGTCTTTCGATTTTCTGTATTAAAAATGGGAATGA
ATAATATAACTGAAAAAATATCTTTTCGTTTGAAATACCTCTTGCTTCGC
AACGTCTCACTGGCTCTCGCTCGACCAAAATTTCGACAGAAACTCGCTCT
TTCGATTTTCTGTATTAAAAATGGGAATGAATAATATAACtgaaaaaata
tcttttcctTTGAAATACCTCTTGCTTCGTAACGTCTCACTGGCTCTCGC
CAAAATTTCGATAGGAACTCTCGGTCTTTCGATTTTCTGTTTAAAAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067617-exon-scaffold_471-1491911889:281878..282874 | TCONS_00067617-exon-scaffold_471-1491911889:281878..282874 | Clytia hemisphaerica | exon |
| TCONS_00067617-exon-scaffold_471-1510915933:281878..282874 | TCONS_00067617-exon-scaffold_471-1510915933:281878..282874 | Clytia hemisphaerica | exon |
| TCONS_00067617-exon-scaffold_471-1575043694:281878..282874 | TCONS_00067617-exon-scaffold_471-1575043694:281878..282874 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_471 | supercontig | scaffold_471:281878..282874 . |
Blast
The following BLAST results are available for this feature:
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