TCONS_00067604 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067604
Unique NameTCONS_00067604
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1402

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067604 ID=TCONS_00067604|Name=TCONS_00067604|organism=Clytia hemisphaerica|type=transcript|length=1402bp
TTTCGATAGTCTTCACGTGGTCCACGGCAAGCCGGCTCGGCTACCTCTGA
ACTTTGAACAGAACATTCGAATTCGAACGAACTTGGAACCCCTGGTTTCA
AGCGTTGACAACTCGGCCATTAATTACACAAAGAACTACCCGAACTACCA
AATATGAAGTTGCTAATAATCTTGTCGAATTTCTGTTTGGTTTATTCAAA
ATGGTATTTGGGCGAAGCAAAACAACCGAAAACAGCACGTGTAGATGCAG
AGGATGCTTCAAAACGTGTCGATACAGAGGATGCTTCAAAACATGTTCTC
GCGCACTCACCTACCGAGtgtattttgaaatgtaaaagacaattgaaaaa
aggtttttatgtagaaaagaaaagtcaatgtttttgtttgaaaaacgaag
aacaaaaaatatatgcaAGTGAAAATAACACCGGATTTCTTTATCATCAA
ATAGAGGACACTCCATTATCGAGTTGTAAAGAAGTGAAGGAAAATTGCCC
AACCTGCACGTCCGATTTTTATTCCCTAGAGAGAGACTGCATtatgaaaa
aagtgttttgtgAATTTACTGCTGATGGTGTTGAAAAACCAAGTTGTAAA
GATATCAGAAATAATTGCCCAACATGCGAAACCAACTTCTACAATATAGA
AATGCCAAGTGGAGAACAAGTAAACCTTTTCTGCAAGATTGAAAACGGAG
CAGTTGTCGATGGAACTTGTAAATCAATCAATGAAATTTGTCCTAGCTGT
CCTTCGCAGCTTTACTTGATGGAGTCGAACGATATCTTTcgccaaatatt
ttgtcaattttctatTGACGGTGTTGGAGAGGCAAGTTGCAACGACATCA
AAAAGCAATGTCCAACATGCGAAACACACTTCTACATTACCGAACTACCG
ACCGAGgtacaaaagaaaatattttgcaagATCGAAAAAGGAGCAGTTGT
TGATGGGTCTTGCAAAGCAATCAAAGAAATTTGCCCTGGCTGTCAAtctg
gtttcttttttttcgaaatgttTGCACAAAACTCAAATCGATTTTGTGAT
ATGAATGTCGACGGAGGTGGTTGGTTAGCCGTCGGGAACGTGACATTAAC
GAGTGCAAACCAAGTGGCGGGAATGTTAACAAGTATTAATACAGGATATC
GAATCTCAAAACTCAATCAGATTCAAAACGGAAAATTCATGTTGAGCAAC
TCAGATATTCGAAGCTTATTTAAAAATAGGGGTTACACCGAAGTCAGAGT
CAAATGCTTCAAACCGTACCATGGCCGAACTCTACATGTTAAGTTTAGTG
GCAACGTTGTTTACAAATGGCTGGTCAACAGAGAGCGCACACTAGGAGTT
TGTGGCAGTGCTCAGTTTTTCGgcGATGACAACTCAAAGACTTCAAAACA
TG
Run BLAST on NCBI

protein sequence of TCONS_00067604-protein

>TCONS_00067604-protein ID=TCONS_00067604-protein|Name=TCONS_00067604-protein|organism=Clytia hemisphaerica|type=polypeptide|length=416bp
MKLLIILSNFCLVYSKWYLGEAKQPKTARVDAEDASKRVDTEDASKHVLA
HSPTECILKCKRQLKKGFYVEKKSQCFCLKNEEQKIYASENNTGFLYHQI
EDTPLSSCKEVKENCPTCTSDFYSLERDCIMKKVFCEFTADGVEKPSCKD
IRNNCPTCETNFYNIEMPSGEQVNLFCKIENGAVVDGTCKSINEICPSCP
SQLYLMESNDIFRQIFCQFSIDGVGEASCNDIKKQCPTCETHFYITELPT
EVQKKIFCKIEKGAVVDGSCKAIKEICPGCQSGFFFFEMFAQNSNRFCDM
NVDGGGWLAVGNVTLTSANQVAGMLTSINTGYRISKLNQIQNGKFMLSNS
DIRSLFKNRGYTEVRVKCFKPYHGRTLHVKFSGNVVYKWLVNRERTLGVC
GSAQFFGDDNSKTSKH
Run BLAST on NCBI

transcript from alignment at scaffold_471:313928..321281-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067604 ID=TCONS_00067604|Name=TCONS_00067604|organism=Clytia hemisphaerica|type=transcript|length=7354bp|location=Sequence derived from alignment at scaffold_471:313928..321281- (Clytia hemisphaerica)
TTTCGATAGTCTTCACGTGGTCCACGGCAAGCCGGCTCGGCTACCTCTGA ACTTTGAACAGAACATTCGAATTCGAACGAACTTGGAACCCCTGGTTTCA AGCGTTGACAACTCGGCCATTAATTACACAAAGAACTACCCGAACTACCA AATATGAAGTTGCTAATAATCTTGTCGAATTTCTGTTTGGTTTATTCAAA ATGGTATTTGGGCGAAGCAAAACAACCGAAAACAGCACGTGTAGATGCAG AGGATGCTTCAAAACGTGTCGATACAGAGGATGCTTCAAAACATGTTCTC GCGCACTCACCTACCGAGTGTATTTTGAAATGTAAAAGACAATTGAAAAA AGGTTTTTATGTAGAAAAGAAAAGTCAATGTTTTTGTTTGAAAAACGAAG AACAAAAAATATATGCAAGTGAAAATAACACCGGATTTCTTTATCATCAA ATAGAGGTAATTCAAGTGCGTAATACTTTAATAGGATAAATTTTCGCGGG GATTAAATTTCGCTTCGAGCTGATCCGCAAAATTTTAAGATTTCGCGGGG ACTTGATTTCGCGGATGGCATCGGGAGACAATATTTTCTAGTTTTACGTC TTTTTCTGCCAAGTTACACGTACTGGTTGGTTGTTGAAGTACGCATTATT AGCGCTACTTAGATGCTAGTTAACATTTTAAAAGTAGTTATCTGACATCT TTGCGAGTTTGGCGGATTGTATAATTGGGACTTGACCCGAATTCCACGAA AATTAATCCCATTAAAGAAAGTAGTTATCTTACAATTNTGCACTACTTTA ATAGGATAAATTTTCGCGGCGATTAAATTTCGCTTTGAGCTGATTTTCTG CCAAGTTATACGTACTGGTTGGTTGTTGACGCATTATTAGCGCTACTTAG ATGCTAGTTAACATTTTAAAAGTAGTTATCTGACATCTTCGCGTGTTTGG CGGATATTATAATTGGGACTTGATACAGAAATCCACGAAAATTTATCCCA TTAAAGAATGTAGTTATCTTACAATTTGAAGTGCAATCAACAATTAGTCA CGAAAAACACGTTTTTTATAAGAACATCCACAATCTTTGCCCCACCCCCC AGATTTGCTAGGTTTGCGGGATGACGGGTATGTGCCGCCCAACTTTTGGC GGTTGGGCCCTTATAGGGACCAAAATGGAGAAAAAACCTTATTTTGTGAC CCTTATTGGGACTATTTCATAGAAGAGGGTCACGATATGGAATTTGAGCT GTTTTTACAACCCTTAGGGGGACTGGAATTGAATTATGTGATTTTAACGA CCCTTAGTGGGATTTTGAGGATCCAAAAAAGAGACCCTTAAGGGTGGCAC ATATCTTACCCTCATTTCGCCTAGGTACCCGCCCCCCCCGGAAATCTTTG AAGCGTGTACCTACTTCGTGTCAGCTTAATCACTTTTCAAATCACTTAAC CCCGTCTCGCGGCAACTTTAAAGCGTAAAAGGTACCAAAAGAGAAAATTT TCCTAATTTTTTTAAGAAGCTCTCCAAAATTAATTTTTATATTTTTTCTA TATTCTATTTGCAGCTCCTACTTACTTTAAGGGCAGAAAGTTTCGCGGGC AGAAAGTTTCGCGAAGTCAAAAAGTCGCGAAATTCAGCGAATTTAAGTTT CACGAATTATGGTTTTAGCCGAAATTTCACAGATAGAACTTTCGCGAATT CATATAAAATTTACCTTTTTTGGTAACAAAAACTCATAAAACACGCAAAA ATTTAGCAAACAGTGCAAAAGTGAAGAGGAAAGTTTATTTTTCGCAAAAA AAACCTTTGCGTTTTTCAGGTTTAATTTTTTACCTGGCAGAAACTTTCGC GAAAAAGGATCAAAATCGCGAAAAACGCGAAAGTTTCTGCCCACGAAAGT TTCTGCCCTTAAAGTAATTGGCTGGTTTACATAATTGCACCTAACAAATA TAATTACAGCCGTGTGATTATTTTCCCCCAATTATTCACGTGGACAAAAA ATTTAATTATTTAATGCATCGTGTTTAATGGCGGATGAAAGACAAACATT TTGCTTCCACGATTGGCTGTTACGAGCAGTCTGTTCGTCTAAAGAATCCT CCATTGTAACACGCATGCGTAATTTGTCGTTCTTTAAAACCATATGTAGT TAATTCCTGTGATAATTAAAGAGGAATGAATACGTGGGTGGTACAGTCAC TTTCGGTCAGGGTCGTGGACGGCGAAAATTGTCGTCTTTTATGAAATTTG TCGTTCTTTTTGTCTATTTTTAATAAATGCAGGGTCTTTTAGATAAACGC CCCTCGTGAATATATTGTAATGATTTACTTCGAATAAACGCCACGGGGTG TTTTTTTAGTTTTTAAAAGAAAGGATTTATTAAATAATCTTTGACCAAGG TCATTTCAACAAAGTGAATCAAAGCCTTTTTTTCCCTTTTCTTTATAATT TGAGTACCAATTTGTCAATTTAGGGATGTAAGAACGGGTCAAAAGCAATT CAGCCTTTTCGCAAGCATATGTAAGGAAATATCATTCCCTGAAACTACAG TAAATTTGCAAAAAAAAAAAACAACAAAAAAAAAAAAAAAAAAGGCAAGC TGATTCATTTCCATACGTTTCGAAACATTATAGCTGAATTCACAAAAATT CATAGTGAAGTACTTTTCATCAGCCATCTTGTTTCTTCATCAACGTGCTT CGGTTCTACGAGTCCGTGGTTAGCCTTACTTAATATGTCTAACATACAAT TTTCTGTAATATATCTTAGTAAGTGTGAATTAAGATGCAAGTCAAGTTTG AGAAATATCATGCAATCAATCGTATTCATGCACAATCACAAAAAAAAAGT CAAATGAAAAACACCGATAATACGAAACTCGTTAACTTGAGTTTAAATAG ACACCCCTGTCTCAGTGCCCCGGTGGCCTGATTTCAGTACATGATTTTTT TCAGTACATGGTTTCAGTACATGATTTTTTCCTACGTCACTGCAGTAATN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NATTACTGCAGTGACGTAGGAAAAAATCATGTACTGAAACCATGTACTGA AAAAAATCATGTACTGAAATCAGGCCACCGGGGCACTGAGACAGGGGTGT AAATAGGGTACACGTTTTTTATGAGAACAAACTATATAAGAACATGAGCC TTCGAGGGTCAAAATGTTAAGAACAAGTGAAGAACATTTTAAGGCTTAAA ATTCAAAAAGTTAAGAACATCCATAGGCTTCAAAAATTTTGGATGATCTT TTAAAAAAAACGTGTATGGTGAAAAAAACATTACTTATTGAAAACACAAG AAGTTTTTTTCGCGTTGGTGCAATGCAACATGCTCCGTCCCAACGCGTGT CTCGTGGTTTCTTTTTTTGTTTCATGGGACAAAAAGTGAGGGAAATACCC AAAAGACACGCTGATTTTGTCTCTGGGACAAGAGTGAAAGAAGCACAAAT GTTATTAAAAGACGGGGTGGAGGCACGAGAAAGCGTTTCAGGTTGGTGGG ATGGAGCATGTTGCACTGCACCAACTCGAAAAAAACTTCTCGTGTCCCCA AGCCTGTACACTTATCTTGTAACGATCTGGTTACCAAACAACACCTATGT TACTGCCTAACACGGCATTATAAAAGACTCAAAACTATTTTTGTTTTTCA TAGTCCGCTGCAAAATATATCCAGTAAAGTAATCATGAGTTTATTTTATT TCTAGGACACTCCATTATCGAGTTGTAAAGAAGTGAAGGAAAATTGCCCA ACCTGCACGTCCGATTTTTATTCCCTAGAGAGAGACTGCATTATGAAAAA AGTGTTTTGTGAATTTACTGCTGATGGTGTTGAAAAACCAAGTTGTAAAG ATATCAGAAATAATTGCCCAACATGCGAAACCAACTTCTACAATATAGAA ATGCCAAGTGGAGAACAAGTAAACCTTTTCTGCAAGATTGAAAACGGAGC AGTTGTCGATGGAACTTGTAAATCAATCAATGAAATTTGTCCTAGCTGTC CTTCGCAGCTTTACTTGATGGAGTCGAACGATATCTTTCGCCAAATATTT TGTCAATTTTCTATTGACGGTGTTGGAGAGGCAAGTTGCAACGACATCAA AAAGCAATGTCCAACATGCGAAACACACTTCTACATTACCGAACTACCGA CCGAGGTACAAAAGAAAATATTTTGCAAGATCGAAAAAGGAGCAGTTGTT GATGGGTCTTGCAAAGCAATCAAAGAAATTTGCCCTGGCTGTCAATCTGG TTTCTTTTTTTTCGAAATGTTTGCACAAAACTCAAATCGATTTTGTGATA TGAATGTCGACGGAGGTAAGAATCTATATATTAATACGCTAAAACGTTTT TGCTTTTGAAGATTTCTTATTCAGATGCTCTTTAAAACTTTCTGTTTACT ATAGCGGCTCCCTATCACTTTCAAAACTTTTCAAAGTCTTTCAATAAGTC ACTCTCGAATGTCCAGCCACGATGGCTAGCCACGATGGCTAAAAAGATCG AAAATATAATTCTTCTAAGCCATTTACTCTATTGTGGTTAAAAATTGCAA TGCAATGTTATCTTTTATATCCTTTTTTTCATTAAATTAAAATCTTATCA TTGTTTCGGCAGCTATCTTTCTTCGTTCAGTGATTTTTTATATGTATAGT GATTCGCTGGATTGGGACACGCAGCGTGCGACGCTGCACATACGGCTAGT TATTTATTATTTCAAAAACAACAACTTAAAGAGGACCAGCAGCACCACCC CTTGTCATGAAAAACAGTTTTTTTGCTCTTAAAGGGACATAAAAGTAGTA AAATGTAAACATTGCGCAAACCACGTGACATTAAATAGAACAAAACAAAC AATCTGATTGTAAAATTGTAAAACAATTGAAGCAATCAAAATAAGCCATA TTTGTTTTTATTTTTTATTTTNATTGTAAAATTGTAAGACAATTGAAACA ATCAAAATCAGCCATATTTGTTTTTATTTTATATTTTGACATGTGACATT TGTTTTGATTTTGTATCGCGTAGGCTACGTCATCTCTTCCTTCGTTTCGA GCGTAAAACTCCTACTCTTCGGGATATGAGCACTGCTCTTGTTTCGAATA TTGAAATTCTTCGAGTAAATCGCATCCGCACTGAGGTTTTAATGAAACAA TCGAGAGTTTTGAAACCTAAGCCAATCAGCTGTGTTTTAAACATTCTTTT ATTTGAAATCTCTATTGATAAGGAAGTTTCTAGACGTCGACCAGAAATGA CGACCACGACCGGCGACCACGACCAGCGACCAGATAAATTTGGGTTATCG AGATTTTTCTCTTTCTCCAACGTAGAGTGTCTCTAATCATTTGAATATAT TTAATATTGAAGAGTAAGCTCACCCCTGTCTCATCTAATTAAAGCCACGT GCCAAATACGTAAAACAACTATTTCGACGCTCTTGGAGCTTGATTCATCA GATTGTTATTTCTGTCGAAATTAGTCATTTTGTCGGCATAAAGACAATAG AATAATTGATTAGAATCATAAACTGGCCTTCCCAATTTTTCCTACTCTAT CTATTCATACTAAAGGCATATCATTCAGCATAATTAAAAAATTTGCAAGC TTACAAACATCATACTTAATGATCCTGTCAATATTTTTGTCAAATAGCGT CACTTTGTCAAGAAAATGACTGGTTACTTCAAAGGTCACTTTTTAGTATT TTGAGGACTTGATTTAAACATTCTCTACGGTGGAGAGAGCAGATAAACTC GATAACCAAAATTTATCTGGTCGCCGGTCGTGGTCGCTATTTCTAGTCGA TGTTTAGAAACTCTCTATTGATAAACATCTTTTGTGACAGTTGTCTACTA TGTTTAAACCTATTAATAAGCAATTCCCGGTGGGGGTTACTAGTGGCCGC CTATAGCAATGCCTATAGACCAAGAGTAAGGCCTAAAAGCCTGGAGCTTT CTATTGTGTAGACTAGTATCGCACAGCATACGGTTACTTTACAAATTTAG TCAATACTCTCATGTTCCTTTAAGAGACCACTAATATTGATTCATCAAGT AAATCCAGCGACTTCTAGGCTCAAATATTCCAATGTGTTCATCTATCTGC TTTAAAAAGCAAGCATCTTATTGAGATTTTAGATTTTCAGTATCAAGTAG ATTTTTTTATCAAAATTGCGTGGAATTATTGGAAATAGTTGAGTTNTGAG ATTTAAGGCTTTCAGTGTCAATTAAAATTTTTTTATCAAAATTGCGTGGA ATTATTGGAAATAGTTGAGTTTCCCTTTAATTTTTCAGGTGGTTGGTTAG CCGTCGGGAACGTGACATTAACGAGTGCAAACCAAGTGGCGGGAATGTTA ACAAGTATTAATACAGGATATCGAATCTCAAAACTCAATCAGATTCAAAA CGGAAAATTCATGTTGAGCAACTCAGATATTCGAAGCTTATTTAAAAATA GGGGTTACACCGAAGTCAGAGTCAAATGCTTCAAACCGTACCATGGCCGA ACTCTACATGTTAAGTTTAGTGGCAACGTTGTTTACAAATGGCTGGTCAA CAGAGAGCGCACACTAGGAGTTTGTGGCAGTGCTCAGTTTTTCGGTAGGT TTGATTGTTAAGATTTAGTGTAGTAAGTATGAGAATTGCAAAAAGATCCA GGAATTTCACTCATTCCAAAGATAGATTCTAAACTTCAGACAACGTTTAC CAGTAAAACAAAAGATTTATAATTTAGGATTTTCACCGCATTTCAACTGA CGAGTAAATCTAGCGTTTTCTTTGTTTTCAAGTGTAGTGCTGTTACGGTT CAAATTGTAATAAAACCCAGTCCAGGATTCGAAATTAAAGGGCCAAGAAG TTTCTAAGCTAGTGGCTTCAGTTTTTCAATATTTTTCAAATACATGCAAC ATATGTTTTCTTGATTTTTTTTAGGCGATGACAACTCAAAGACTTCAAAA CATG

Coding sequence (CDS) from alignment at scaffold_471:313928..321281-

>TCONS_00067604 ID=TCONS_00067604|Name=TCONS_00067604|organism=Clytia hemisphaerica|type=CDS|length=4992bp|location=Sequence derived from alignment at scaffold_471:313928..321281- (Clytia hemisphaerica)
GCGATGACAACTCAAAGACTTCAAAACATGTGGTTGGTTAGCCGTCGGGA
ACGTGACATTAACGAGTGCAAACCAAGTGGCGGGAATGTTAACAAGTATT
AATACAGGATATCGAATCTCAAAACTCAATCAGATTCAAAACGGAAAATT
CATGTTGAGCAACTCAGATATTCGAAGCTTATTTAAAAATAGGGGTTACA
CCGAAGTCAGAGTCAAATGCTTCAAACCGTACCATGGCCGAACTCTACAT
GTTAAGTTTAGTGGCAACGTTGTTTACAAATGGCTGGTCAACAGAGAGCG
CACACTAGGAGTTTGTGGCAGTGCTCAGTTTTTCGGACACTCCATTATCG
AGTTGTAAAGAAGTGAAGGAAAATTGCCCAACCTGCACGTCCGATTTTTA
TTCCCTAGAGAGAGACTGCATTATGAAAAAAGTGTTTTGTGAATTTACTG
CTGATGGTGTTGAAAAACCAAGTTGTAAAGATATCAGAAATAATTGCCCA
ACATGCGAAACCAACTTCTACAATATAGAAATGCCAAGTGGAGAACAAGT
AAACCTTTTCTGCAAGATTGAAAACGGAGCAGTTGTCGATGGAACTTGTA
AATCAATCAATGAAATTTGTCCTAGCTGTCCTTCGCAGCTTTACTTGATG
GAGTCGAACGATATCTTTCGCCAAATATTTTGTCAATTTTCTATTGACGG
TGTTGGAGAGGCAAGTTGCAACGACATCAAAAAGCAATGTCCAACATGCG
AAACACACTTCTACATTACCGAACTACCGACCGAGGTACAAAAGAAAATA
TTTTGCAAGATCGAAAAAGGAGCAGTTGTTGATGGGTCTTGCAAAGCAAT
CAAAGAAATTTGCCCTGGCTGTCAATCTGGTTTCTTTTTTTTCGAAATGT
TTGCACAAAACTCAAATCGATTTTGTGATATGAATGTCGACGGAGATGAA
GTTGCTAATAATCTTGTCGAATTTCTGTTTGGTTTATTCAAAATGGTATT
TGGGCGAAGCAAAACAACCGAAAACAGCACGTGTAGATGCAGAGGATGCT
TCAAAACGTGTCGATACAGAGGATGCTTCAAAACATGTTCTCGCGCACTC
ACCTACCGAGTGTATTTTGAAATGTAAAAGACAATTGAAAAAAGGTTTTT
ATGTAGAAAAGAAAAGTCAATGTTTTTGTTTGAAAAACGAAGAACAAAAA
ATATATGCAAGTGAAAATAACACCGGATTTCTTTATCATCAAATAGAGGC
GATGACAACTCAAAGACTTCAAAACATGTGGTTGGTTAGCCGTCGGGAAC
GTGACATTAACGAGTGCAAACCAAGTGGCGGGAATGTTAACAAGTATTAA
TACAGGATATCGAATCTCAAAACTCAATCAGATTCAAAACGGAAAATTCA
TGTTGAGCAACTCAGATATTCGAAGCTTATTTAAAAATAGGGGTTACACC
GAAGTCAGAGTCAAATGCTTCAAACCGTACCATGGCCGAACTCTACATGT
TAAGTTTAGTGGCAACGTTGTTTACAAATGGCTGGTCAACAGAGAGCGCA
CACTAGGAGTTTGTGGCAGTGCTCAGTTTTTCGGACACTCCATTATCGAG
TTGTAAAGAAGTGAAGGAAAATTGCCCAACCTGCACGTCCGATTTTTATT
CCCTAGAGAGAGACTGCATTATGAAAAAAGTGTTTTGTGAATTTACTGCT
GATGGTGTTGAAAAACCAAGTTGTAAAGATATCAGAAATAATTGCCCAAC
ATGCGAAACCAACTTCTACAATATAGAAATGCCAAGTGGAGAACAAGTAA
ACCTTTTCTGCAAGATTGAAAACGGAGCAGTTGTCGATGGAACTTGTAAA
TCAATCAATGAAATTTGTCCTAGCTGTCCTTCGCAGCTTTACTTGATGGA
GTCGAACGATATCTTTCGCCAAATATTTTGTCAATTTTCTATTGACGGTG
TTGGAGAGGCAAGTTGCAACGACATCAAAAAGCAATGTCCAACATGCGAA
ACACACTTCTACATTACCGAACTACCGACCGAGGTACAAAAGAAAATATT
TTGCAAGATCGAAAAAGGAGCAGTTGTTGATGGGTCTTGCAAAGCAATCA
AAGAAATTTGCCCTGGCTGTCAATCTGGTTTCTTTTTTTTCGAAATGTTT
GCACAAAACTCAAATCGATTTTGTGATATGAATGTCGACGGAGATGAAGT
TGCTAATAATCTTGTCGAATTTCTGTTTGGTTTATTCAAAATGGTATTTG
GGCGAAGCAAAACAACCGAAAACAGCACGTGTAGATGCAGAGGATGCTTC
AAAACGTGTCGATACAGAGGATGCTTCAAAACATGTTCTCGCGCACTCAC
CTACCGAGTGTATTTTGAAATGTAAAAGACAATTGAAAAAAGGTTTTTAT
GTAGAAAAGAAAAGTCAATGTTTTTGTTTGAAAAACGAAGAACAAAAAAT
ATATGCAAGTGAAAATAACACCGGATTTCTTTATCATCAAATAGAGGCGA
TGACAACTCAAAGACTTCAAAACATGTGGTTGGTTAGCCGTCGGGAACGT
GACATTAACGAGTGCAAACCAAGTGGCGGGAATGTTAACAAGTATTAATA
CAGGATATCGAATCTCAAAACTCAATCAGATTCAAAACGGAAAATTCATG
TTGAGCAACTCAGATATTCGAAGCTTATTTAAAAATAGGGGTTACACCGA
AGTCAGAGTCAAATGCTTCAAACCGTACCATGGCCGAACTCTACATGTTA
AGTTTAGTGGCAACGTTGTTTACAAATGGCTGGTCAACAGAGAGCGCACA
CTAGGAGTTTGTGGCAGTGCTCAGTTTTTCGGACACTCCATTATCGAGTT
GTAAAGAAGTGAAGGAAAATTGCCCAACCTGCACGTCCGATTTTTATTCC
CTAGAGAGAGACTGCATTATGAAAAAAGTGTTTTGTGAATTTACTGCTGA
TGGTGTTGAAAAACCAAGTTGTAAAGATATCAGAAATAATTGCCCAACAT
GCGAAACCAACTTCTACAATATAGAAATGCCAAGTGGAGAACAAGTAAAC
CTTTTCTGCAAGATTGAAAACGGAGCAGTTGTCGATGGAACTTGTAAATC
AATCAATGAAATTTGTCCTAGCTGTCCTTCGCAGCTTTACTTGATGGAGT
CGAACGATATCTTTCGCCAAATATTTTGTCAATTTTCTATTGACGGTGTT
GGAGAGGCAAGTTGCAACGACATCAAAAAGCAATGTCCAACATGCGAAAC
ACACTTCTACATTACCGAACTACCGACCGAGGTACAAAAGAAAATATTTT
GCAAGATCGAAAAAGGAGCAGTTGTTGATGGGTCTTGCAAAGCAATCAAA
GAAATTTGCCCTGGCTGTCAATCTGGTTTCTTTTTTTTCGAAATGTTTGC
ACAAAACTCAAATCGATTTTGTGATATGAATGTCGACGGAGATGAAGTTG
CTAATAATCTTGTCGAATTTCTGTTTGGTTTATTCAAAATGGTATTTGGG
CGAAGCAAAACAACCGAAAACAGCACGTGTAGATGCAGAGGATGCTTCAA
AACGTGTCGATACAGAGGATGCTTCAAAACATGTTCTCGCGCACTCACCT
ACCGAGTGTATTTTGAAATGTAAAAGACAATTGAAAAAAGGTTTTTATGT
AGAAAAGAAAAGTCAATGTTTTTGTTTGAAAAACGAAGAACAAAAAATAT
ATGCAAGTGAAAATAACACCGGATTTCTTTATCATCAAATAGAGGCGATG
ACAACTCAAAGACTTCAAAACATGTGGTTGGTTAGCCGTCGGGAACGTGA
CATTAACGAGTGCAAACCAAGTGGCGGGAATGTTAACAAGTATTAATACA
GGATATCGAATCTCAAAACTCAATCAGATTCAAAACGGAAAATTCATGTT
GAGCAACTCAGATATTCGAAGCTTATTTAAAAATAGGGGTTACACCGAAG
TCAGAGTCAAATGCTTCAAACCGTACCATGGCCGAACTCTACATGTTAAG
TTTAGTGGCAACGTTGTTTACAAATGGCTGGTCAACAGAGAGCGCACACT
AGGAGTTTGTGGCAGTGCTCAGTTTTTCGGACACTCCATTATCGAGTTGT
AAAGAAGTGAAGGAAAATTGCCCAACCTGCACGTCCGATTTTTATTCCCT
AGAGAGAGACTGCATTATGAAAAAAGTGTTTTGTGAATTTACTGCTGATG
GTGTTGAAAAACCAAGTTGTAAAGATATCAGAAATAATTGCCCAACATGC
GAAACCAACTTCTACAATATAGAAATGCCAAGTGGAGAACAAGTAAACCT
TTTCTGCAAGATTGAAAACGGAGCAGTTGTCGATGGAACTTGTAAATCAA
TCAATGAAATTTGTCCTAGCTGTCCTTCGCAGCTTTACTTGATGGAGTCG
AACGATATCTTTCGCCAAATATTTTGTCAATTTTCTATTGACGGTGTTGG
AGAGGCAAGTTGCAACGACATCAAAAAGCAATGTCCAACATGCGAAACAC
ACTTCTACATTACCGAACTACCGACCGAGGTACAAAAGAAAATATTTTGC
AAGATCGAAAAAGGAGCAGTTGTTGATGGGTCTTGCAAAGCAATCAAAGA
AATTTGCCCTGGCTGTCAATCTGGTTTCTTTTTTTTCGAAATGTTTGCAC
AAAACTCAAATCGATTTTGTGATATGAATGTCGACGGAGATGAAGTTGCT
AATAATCTTGTCGAATTTCTGTTTGGTTTATTCAAAATGGTATTTGGGCG
AAGCAAAACAACCGAAAACAGCACGTGTAGATGCAGAGGATGCTTCAAAA
CGTGTCGATACAGAGGATGCTTCAAAACATGTTCTCGCGCACTCACCTAC
CGAGTGTATTTTGAAATGTAAAAGACAATTGAAAAAAGGTTTTTATGTAG
AAAAGAAAAGTCAATGTTTTTGTTTGAAAAACGAAGAACAAAAAATATAT
GCAAGTGAAAATAACACCGGATTTCTTTATCATCAAATAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042213XLOC_042213Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067604-exon-scaffold_471-1575043694:320826..321281TCONS_00067604-exon-scaffold_471-1575043694:320826..321281Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1575043694:316567..317176TCONS_00067604-exon-scaffold_471-1575043694:316567..317176Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1575043694:314288..314593TCONS_00067604-exon-scaffold_471-1575043694:314288..314593Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1575043694:313928..313957TCONS_00067604-exon-scaffold_471-1575043694:313928..313957Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1510915933:320826..321281TCONS_00067604-exon-scaffold_471-1510915933:320826..321281Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1510915933:316567..317176TCONS_00067604-exon-scaffold_471-1510915933:316567..317176Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1510915933:314288..314593TCONS_00067604-exon-scaffold_471-1510915933:314288..314593Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1510915933:313928..313957TCONS_00067604-exon-scaffold_471-1510915933:313928..313957Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1491911889:320826..321281TCONS_00067604-exon-scaffold_471-1491911889:320826..321281Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1491911889:316567..317176TCONS_00067604-exon-scaffold_471-1491911889:316567..317176Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1491911889:314288..314593TCONS_00067604-exon-scaffold_471-1491911889:314288..314593Clytia hemisphaericaexon
TCONS_00067604-exon-scaffold_471-1491911889:313928..313957TCONS_00067604-exon-scaffold_471-1491911889:313928..313957Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067604-proteinTCONS_00067604-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_471supercontigscaffold_471:313928..321281 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0594765 0.206831 0.14162 0.098826 0 0.126762 0.0764665 0.147681 0 0.155203 0.0602577 0.0594165 0 0.143777 0.0337727 0.0181217 0.426226 0.669316 0.0316124 0.0661603 2.14434 2.13563 0.497839 1.69403 0.564017 0.832654 0.366993 0.0435184 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014716Fibrinogen_a/b/g_C_1
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067604 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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