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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067603 ID=TCONS_00067603|Name=TCONS_00067603|organism=Clytia hemisphaerica|type=transcript|length=692bp
ggcggtttttacttattcttacttttcgaatgactggatagtgcttttca
aggtttttaacgatttttcaaggttttcaaggttttcaaggtcccgtaga
caccctgcaAGAAGGTGGATAAAAAGATTGTGATATGTATTTCATTTCCC
TTTCAAGTGATGTTCAGTAAGATTCTTGCCATACTGAAATGAATGAAGAC
AAAGCTGGTGTTTCAATGTCGAAGATAGTTTATGCCAGTGGTTATTGTAC
CGGGCAGGTACGAATCTCAAAACGAACAACCAAAGGGATGGCCAGGGCCC
CCAAGGAATTGGTAAGTCTGCCTCCATTGCACTGTTAAAACTATTGTTTA
TGTACGATAAACACCGTGAATTTATACAACAAAGTCACGgcgataaattc
aaaataactcAGCGGCTATTGTACTGGGCAGGTACGAATTTCAAAACGAA
CAACCAAAGGGATGGCCAGGGCCCCCAAGGAATTGGTAAGTCTGCCTCCA
TTGCACTGTTAAAACTATTGTTTATGTGCGATAAACACCCTGAATTTATA
CAACAAAGTCAGGGCGATAAGTTCAAAGTAACCCAGCGGCTATTGTACCG
GACAGGTACGAATTTCAAAACGAACAACCAAAGGGATGGCCAGGGCCCCC
AAAGAATTGGTAAGATTGCCTCAATTGCACTGTTAAAACTAT Run BLAST on NCBI transcript from alignment at scaffold_471:278721..281424- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067603 ID=TCONS_00067603|Name=TCONS_00067603|organism=Clytia hemisphaerica|type=transcript|length=2704bp|location=Sequence derived from alignment at scaffold_471:278721..281424- (Clytia hemisphaerica)
GGCGGTTTTTACTTATTCTTACTTTTCGAATGACTGGATAGTGCTTTTCA
AGGTTTTTAACGATTTTTCAAGGTTTTCAAGGTTTTCAAGGTCCCGTAGA
CACCCTGCAAGAAGGTGGATAAAAAGATTGTGATATGTATTTCATTTCCC
TTTCAAGTGATGTTCAGTAAGATTCTTGCCATACTGAAATGAATGAAGAC
AAAGCTGGTGTTTCAATGTCGAAGATAGTTTATGCCAGTGGTTATTGTAC
CGGGCAGGTACGAATCTCAAAACGAACAACCAAAGGGATGGCCAGGGCCC
CCAAGGAATTGGTAAGTCTGCCTCCATTGCACTGTTAAAACTATTGTTTA
TGTACGATAAACACCGTGAATTTATACAACAAAGTCACGGCGATAAATTC
AAAATAACTCAGCGGCTATTGTACTGGGCAGGTACGAATTTCAAAACGAA
CAAACAAAGGGATGGCCAGGGCCCCCAAGGAATTGGTAAGTCTGCCTCCA
TTGCACTGTTAAAACTATTGTTTATGTACGATAAACACCGTGAATTTATA
CAACAAAGTCACGGCGATAAATTCAAAATAACCCAGCGGCTATTGTACCG
GACAGGTACAAATACGAAAACGGACAACGAAAGGGATGGCCAGGGCCCCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
GATCTTACGATAAACACCGTGAATTTATACAACAAAGTCACGGTGATAAA
TTCAAAATAACCCAGCGGCTATTGTACCGGACAGGTACAAATACGAAAAC
GGACAACGAAAGGGATGGCCAGGGCCCCCAAAGAATTGGTAAGTCTGCCT
CCATTGCACCGTTAAAACTATTGTTTATGTGCGATAAACACCGTGAATTT
ATACAACAAAGTCACGGCGATAAATTCAAAATAACCCAGCGGCTATTGTA
CCGGACAGGTACAAATACGAAAACGGACAACGAAAGGGATGGCCAGGGCC
CCTAAAGAATTGGTAAGTCTGCCTCCATTGCACTGTTAAAACTATTGTTT
ATGTGCGATAAACACCGTGAATTTATACAACAAAGTCACGGTGATAAATT
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTACTGGGCAGGTACGAA
TTTCAAAACGAACAACCAAAGGGATGGCCAGGGCCCCCAAGGAATTGGTA
AGTCTGCCTCCATTGCACTGTTAAAACTATTGTTTATGTGCGATAAACAC
CCTGAATTTATACAACAAAGTCAGGGCGATAAGTTCAAAGTAACCCAGCG
GCTATTGTACCGGACAGGTACGAATTTCAAAACGAACAACCAAAGGGATG
GCCAGGGCCCCCAAAGAATTGGTAAGATTGCCTCAATTGCACTGTTAAAA
CTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067603-exon-scaffold_471-1575043694:280994..281424 | TCONS_00067603-exon-scaffold_471-1575043694:280994..281424 | Clytia hemisphaerica | exon |
| TCONS_00067603-exon-scaffold_471-1575043694:278721..278981 | TCONS_00067603-exon-scaffold_471-1575043694:278721..278981 | Clytia hemisphaerica | exon |
| TCONS_00067603-exon-scaffold_471-1510915933:280994..281424 | TCONS_00067603-exon-scaffold_471-1510915933:280994..281424 | Clytia hemisphaerica | exon |
| TCONS_00067603-exon-scaffold_471-1510915933:278721..278981 | TCONS_00067603-exon-scaffold_471-1510915933:278721..278981 | Clytia hemisphaerica | exon |
| TCONS_00067603-exon-scaffold_471-1491911889:280994..281424 | TCONS_00067603-exon-scaffold_471-1491911889:280994..281424 | Clytia hemisphaerica | exon |
| TCONS_00067603-exon-scaffold_471-1491911889:278721..278981 | TCONS_00067603-exon-scaffold_471-1491911889:278721..278981 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_471 | supercontig | scaffold_471:278721..281424 - |
Blast
The following BLAST results are available for this feature:
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