TCONS_00067592 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067592
Unique NameTCONS_00067592
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3575

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067592 ID=TCONS_00067592|Name=TCONS_00067592|organism=Clytia hemisphaerica|type=transcript|length=3575bp
ACAATGGTAGAAAATTTTGACATTGATGATCCAAGTGACTGGCCCaagga
atttgaaaatttgaagaaaatcgaAAGCTTATTACGATGTTCCATCTGCT
TTGAATACTTTCATGCTGCAGTTATTGCACCAAATTGCTCTCATAATTAT
TGCTCATTGTGTATACGCAAACATGTCTTGTATAAAAACAATTGTCCAAG
TTGTAACAAGgACCTTGATGACAGTAGCTTGAAACCGAACCGTGTACTGG
ATGAACTTGTACAATACTTCAAAATTGCAAGAAAACAGTTGTTGGATCTT
GTTCAAGTAGCTGAAGAACATCATGGAAATTTGAACACAAATCCTGCTTC
TACTATCAAGATTGatcttgatgaaaaagaaagcaGAGTTGAATCTGAAG
ACACCAGTGATTTTGAAGAAGCTGCTAACTACCGCCTTCCGTTGTTAGAA
ACAAAAGCTCATCCTTCTTCACACCAGAAACTCCAAAATCGTTCAGTATG
CATGAATTCGACCGTCGCTAACCATGGCAATAAAGCAGtaGTACAATGTC
CGAATTGTGACAAACCAGTGTTAGAAAAAGGGATCAATACTCATCTAGAT
GTCTGTTTAAGTGGTGGAATAGCCAAGACGAGAAGCTGGCAATAAACGCT
TGCATTCATCAGGCTCCTCAGAAAATGATCAACCTCGTCCAAAGGCTAAA
AGgaaaaatgaatcaaaaaagAGTGGATCCACCtcaaaaatgaagattga
aacaGCCAACGATATCATATCAGGGAGAAAGGTGAATGTAAGAAAACATT
TACCCAAACAATGTCTTGATGTCATGAGTGATAAACAATTGAAAACTAAA
CTGAAAGAGTACAATCTGTCCACCAAAGGTGACAAAAATactTTGAAGCG
tcgtttaaaagatttccacaCGATGTACAATTCAGAATGTGACGCGTTGA
ACCCTTTATCAGCGCAAGAAATAGCACGCAAGTTGACATTAGAAGAGGAA
CACATCAAAAAGCATGGATACAAACCAAAAACATTAGTATCAACTCATGA
TCGAAGTGTAACTGAACAGCACAAAATTGACATCATTCACAAACACGATC
AAACATACGACGACCACTTCAAGAAGTTGGAAGAAGAAGCGAAAAAGAGA
TTGGGAATTCATATGACATCGCAAAAAAGTCAACAATCATTGACTGTCAA
AACTGAAGATAATAACACGGCGAATGATACCTGTTATCAACAAGGACCTT
CTACGAGTCATTCAAGAAGTCCTTTAGAACCAGACATTATCGACCTTCGA
TCTCAACTCGTGTCACCTGAAGGCAAGTCAACATACACGTTCAGAATCGA
TGACGATACGACCCCTGTTAAAATTAAAGATGAAAGGGAACGATCTAGCT
CAAACGTACCGATAATTGGAGCTAACAAAAATTATGATTCAAGTCAGAAT
GTATCTTCAGGAGTAGTATCCACATCGAACCACAACGTCAAATCGCCATA
TTTTTCCGAGACAAATACAACGAAACGACTCAAAATTGGTTGCAGACAAA
ACTTGAAAGCTAGTAATAAGCTTTTCGAGCATGAAACTAAAAGAGAGGAC
GAATCTAATGAAGAAAACGACAATGAAGGTCCTGAGTATGATTTTGATAC
ATCTCATTTCAAAGGGAATCAAACAGAGACAGAAACTGAAACCGATACCG
ATGAAGGACCAGATGAACGTGAGCAGGTGAAATCACCCTCTGCAAATAGC
AAGATTTCTCTGCCATATCCAGTGCTTTCTAAAGATTTTTATAGAAGGTT
GGGCGAATCGCTTCACCAAGAACGAAATGCAGAACAAAGCAAAGAGAATC
AAACTAATAAGCAAACTGAAACTCTTGAATTGAATAAACAGTCGTCAAAA
GATTTTGAGCAAGACAGCGACCCTGATATCTTTGATACCTCAACTTTCAA
TCaaggaaaaacgaaaaagaaagcaaagtcttccataaaagtcaaaaaag
agcCAATGCCGTCTCCAAAGAAAGATTACAAAAAGAGTGAGAAAAATAAA
CCTCCTCTTTCAGCAAAGGGAACTAAGAAACCTGCTGCCAAACGAAAAGG
AACgagtttaaaaacaaaacaaaatgaaacaatatctaaacattcgaaaa
gcACGTTAGAGAATTATTTTACAAAAGTTAAAACATCTCCAGCGACAACA
CCGACCAAGCCCAATAACACacttccatcttctttctttgcTGCTCGAAA
ACCTAAAACGCCGGAATTACCTAAGCTTATGATAATCGAGTCATCATCCT
CTTCGTCAGATTCTGATATGAACAAAACATTGGAAGACAACCAGAATCAA
CCTTCAAGTATATCAGAATCACCAGTTTTGTTTGGCAGACCTCCCTTCAA
TAGTACAGTGATTAATAAAAGAGACACATCAGTACGAGAAAGTCATAATA
AACAATGCGGCTcacattttaaagaaaatgataATTTAGGGTTATCGAGG
CAACATCGATCACATGTTGCTGGCaatttttgtcaacaaaacgAATCGTT
TAGAAcaactgaaaataaaagacTGTTTTCTCCAAAGATAAAGTCACCAA
CCGAATCCTCCATGCGGCAAGTAACttctaattttggcgaacgaaTGAGA
AATTATAACGACCTATTTGCTGATACAACTTTGACCAGAGATCATTCCAG
AGACTCAGATAATGATAACGATTTTATTCAAGATTCAAGATCAAGAACTA
AAACGAAAGAAGctaattcaaataaaaaactgtcCAGAACAGATTCTTCA
CATTTTGTTACCAATAATGAACAGAATTATGAAGGTCACACCAACCAACC
AGTTACTGTTGATCAATCCTTGGAAAATCACATTGATGAACTTGTCGATG
GAATCCCTTCAGAGGGAATGGATTCTGACGTCACTCTCAGTGAttttaat
gatgacgtcactgaTGACATCACTGGTAAAGAGAATGATATAATACCTCC
GCCACCAATGGATTTCACATGTGCTTTCGAATCGCAATCTCAAATGTTTT
AAGGATCAAATCTCTAGCAGTTTTGAAAATAAGAGAAGAAACGTTAACTA
ATCGTGCTACCGACTTTTTTAAATCTCTAATTATACCACAGGTCTTAAGC
ATAAAAATCTTCCTCTCTTATCTTTTTTGctaatacagttgacgctctct
aattcgacgttcttctTATTCGATACACatccttattcgatgaaaatcca
attacCTTGGAAATCGAATAACCAAGATGAATAACCGAGCGTCAACTTTA
CCTTTTCGTTCAATAGTTTTCATTCACCAATTGTCCCCTTAGAGAAATAG
AATTTGGAGAATTTTATATTCGTATTTTAAAGTATACTGTTTCGATTTGT
TATTCATTTAGAGTTGTCTTCCCTTTTTGTAATCATTTGCAGATGATGTA
TTTAATGTAGGTTTTGTTGTAACtgattttgtactattttttttttgaag
atattgtAGATTTTTTTTACCTAGAAGTAGATATTTCCTATTATTAaatc
aaattgtaaatttatctTACGATAG
Run BLAST on NCBI

transcript from alignment at scaffold_471:64203..71526-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067592 ID=TCONS_00067592|Name=TCONS_00067592|organism=Clytia hemisphaerica|type=transcript|length=7324bp|location=Sequence derived from alignment at scaffold_471:64203..71526- (Clytia hemisphaerica)
ACAATGGTAGAAAATTTTGACATTGATGATCCAAGTGACTGGCCCAAGGA
ATTTGAAAATTTGAAGGTAAATTGAAATTAGAAATTTTCTTTTTTGCTAC
AATTGAAATAACTTGTAATAAATAGGTACAATGGTATCTTCTTACATTTC
CAAATAAAACTTGTTAAAAATCTTTCTTTTTTTTACAGAAAATCGAAAGC
TTATTACGATGTTCCATCTGCTTTGAATACTTTCATGCTGCAGTTATTGC
ACCAAATTGCTCTCATAATTGTATGTATTTGAGTATCTTTTGCAAATTAG
CTTTTTACCTAAAAGTTTATTTTACAATTTTTAAGAATTTCTTCACTAAA
AAATTATGATTCTTCTACCTTTTGCTTTCTTCAGATTGCTCATTGTGTAT
ACGCAAACATGTCTTGTATAAAAACAATTGTCCAAGTTGTAACAAGGTAG
GAGTTACATTTTAAACAAAAAGTGATCATGACGGTTTGTCCATTGCCAAA
AAAAATTCATGCATCAATAATTTTGATTACTTTCTGAAAGTAAGTTAACT
TTTTAAATCATTTGAGTTTTATCCTTGATCTAATTAAGCAAATTTGATAG
TAACCCATCAAAATTTAAGTTTAGTTTTCCTCTTCCAAATATATATATCA
CAAGTAGTAGGGGGCCAAGCTTGGGGTCCTGTTACATCTTTTTTACGACC
TAGCCATTTTTAGTCCATTCCAAAGAACAGTATATTATAAGATATTTTTG
AGAGGGAGGGTGCGGATTAGGACATTTTATGACCATAAAAGAGGAATCTT
TTTGTGACACACCTGCTAGTTGGTAATGTTACAACTTAACTTGATATTTC
AAATAACAAAACAAATGTTTTTTAGGACCTTGATGACAGTAGCTTGAAAC
CGAACCGTGTACTGGATGAACTTGTACAATACTTCAAAATTGCAAGGTAG
TGTAGCATTATTTTGATTTGCGCATTTTGCCAAATGGGCCAAATTATTTT
TTAAAAAAAATTTCCTGTTAAGAAATAAAGTGCATCAATATTTGTTGCTA
TAAGCAGGCCTTTTCTAAATTTAGAAAACAGTTGTTGGATCTTGTTCAAG
TAGCTGAAGAACATCATGGAAATTTGAACACAAATCCTGCTTCTACTATC
AAGGTATACAGTTTAATTCAAGGTCTTAAAGTAAATAGACCCTTTGTTTG
AACTCTCATCAGTTAATTATAAAGATAATGATAATGATAATGGTCAATCA
AGGATCAGCTATTGAGCTGGATAAAATAAATCTTGAAATTTAAAAATATC
ATAGTACTCTCTTGCCACTAGATTGATCTTGATGAAAAAGAAAGCAGAGT
TGAATCTGAAGACACCAGTGATTTTGAAGAAGCTGCTAACTACCGCCTTC
CGTTGTTAGAAACAAAAGCTCATCCTTCTTCACACCAGAAACTCCAAAAT
CGTTCAGTATGCATGAATTCGACCGTCGCTAACCATGGCAATAAAGCAGG
TCAGTGAAATATATATTTTCTTCTTTTTAATTTGTTGAAAACTTTTTATA
TAAAAGAAAAGAAAACACCACAAATATATAGTTATAGTTGATTTTCACAG
CTCTTTGTTCTTTGTAGATCTTTTAAATACACGGTCTTTGAATAAGAATA
ATTTTATAAGAACATGAGGCTCAATTTTCAGAAATGACTAAAAAAGTGAA
TAACGTCGGTATATTTAGGACATTTGAAGAACACATAAGTCTGAAAATTA
TAAAAATTTAAAAACGACTGAAACCTCTGCTAAAACTTATTGGCTCTTAT
AAAAAAAGTGTACATTTTATTTGAATTTTTTGTACTTTTTTCCATTTTTC
AGTAGTACAATGTCCGAATTGTGACAAACCAGTGTTAGAAAAAGGGATCA
ATACTCATCTAGATGTCTGTTTAAGTGGTGGAATAGCCAAGACGAGAAGG
TATTTAACTTCCTTCAGAGGAATTAAATTTTCAATAAAATGAAGGATATT
TTGCATGAGGTCGGTCTGGTTTAATTGAGAAAGGCGTTTAAAACATGCAA
AGATTTCAAATACCCCACTTGTTCTGAAAGAGTTTGAATATTTAACAATT
AATCGCACGATGGGTTATTTTTTCTTATTTGGCACGCCCTCAAAGAGAGC
AATTAATCGTTAATTGCATCCTGTAGAGAGTAATTAATCGTTAATCACAC
TCTTCAATGCCACGCCAATGTTTACAAAATTGATTTTAATGTTTTTTCTT
GCATTTTTTTTGCATCGAACGTTTTAATTGCATTCGAAATTTATTTTTTG
AGAAAGAAAATCAATAAACAACAATAAAAGAAAGACATATAAAAATATAA
AACTCTCAGTGTAATTTCTGTAATTTACTTTCCTAACTGGGAAAAAGTAG
TGAAAGCCATTGTGCGATTAGCTCATAATCACATAATAACTCGTACAATT
CGAAAATTGCACTCGTGATTTTTTTTGTTTCGAATTTTCCTCGTCCTTTC
GGACTCGGAAAATTAATAACAAAAAAATCACTCGTGCAATTATATTCGAA
TTGCACTCGTTATCATGTGATTACATAAACTAATCAATGGGGCATTCCAT
AAAAATACCATAATCTTCTAGATTTTGAAAAGTTTCCTAAAAAATAAGCA
TTACACTACGTAGCTACACTGCAATTTTCTCAGCCAGCTACTTTTTTTAA
TTTTCAGTCTTGTTTTGATTTTTAAGACTGACTGCCAAGAAAGAGTCTTG
CTTTATAAAAGGTATTTGATAATGAAAGGATTATTCTATTCTGATTCCTG
TTTCATTTCAGTGCAGCTGGCAATAAACGCTTGCATTCATCAGGCTCCTC
AGAAAATGATCAACCTCGTCCAAAGGCTAAAAGGTCATTCATATACAAAG
TATTTTGATCGAATATTGAGTTATAATATTGGAATTTCCAAAGAATATAT
TTAAAATCATGGAATGCAAGTATTGAAATTTTCAACTTGCCTTAAATATT
GCATAATTAGAGAAGCCTGAACCAGAGAATTTTTTTTAAGAGGCTTGGAG
AAGTTAAGAAGAGGCGTCATTGTGACTCTCCTTATCTTATTTCAGTCGAT
TAACTGTCTTTTAGCCAAAAAAGAGAGAAATTTATTCAAAAAAATCGCCA
AATACCCCAAGATTATTTTTAATAACACTTTTCCAACTTTAAGGAGGGGG
GGTCAAGATTCTAAATTTCTTCCCTTTTTCTTTCAAGCCTATGTAAATCA
GTTGTTCGAATTTATTTTATAATAGTTGTTTTTAGCTATGCTCCCTTTAC
GCTTTTTCAATTACAGGAAAAATGAATCAAAAAAGAGTGGATCCACCTCA
AAAATGAAGATTGAAACAGCCAACGATATCATGTATGTTTTTCATATTTT
CTTTTTTATGTTTAGTATCACATGAAAACAAGAAAGTCGCAAATCAATTT
TTCTTACTTTGAGACAAAGCTCAAAGAAAAAAAAATCAGTACTTCAAAAA
ATTAATTCCTTTTTTACTTTCAAAAATATTATTGGGAGGCCAAACAAAAT
TTAGTGAACTAATTCATAGAAATGGGTCAAAGAAATATTTAGAATTCATA
TTATTATCTGTGAACTTGTGAAGATCGAACAGGCCACAATGCATTACATG
TTGTTGTTTGTTGAATTTCACATAGATCAGGGAGAAAGGTGAATGTAAGA
AAACATTTACCCAAACAATGTCTTGATGTCATGAGTGATAAACAATTGAA
AACTAAACTGAAAGAGTACAATCTGTCCACCAAAGGTGACAAAAATGTAA
GTCTTCTCTTGCACCTTTTTTACTTATCCAGCTCTATCTGATTTTCTTAC
TTATTTTCATATTCAACAATAGTATATTTTATTACCAAAAACTGTTTGAT
ACCTTGGATATTATTTTCACGAGAACATTTGCTTTTTATTAATGAAAACA
TTCTTTTTTTCATTTCAGACTTTGAAGCGTCGTTTAAAAGATTTCCACAC
GATGTACAATTCAGAATGTGACGCGTTGAACCCTTTATCAGGTACAGCAC
ATTAAAATAATTCCGAAAGTAGAGGAGCCAATAAAATAGTAACAGCGACT
TTGGCACACTGATCACATATCTTAAAATGGCTCTATTTCTGATTGATCTT
GCTGAAAATGTGTCTTTTTGAAGGTCTGAGTCAGTCCATGGCACCTTTGC
TGTGACGTGGACTTTCATTGAACGATTTTGAAATGCCCAAAGCACTTTTC
TGTTTTCTAATCCTCCATACTTTTTTTGCAGCGCAAGAAATAGCACGCAA
GTTGACATTAGAAGAGGAACACATCAAAAAGCATGGATACAAACCAAAAA
CATTAGTATCAACTCATGATCGAAGTGTAACTGAACAGCACAAAATTGAC
ATCATTCACAAACACGGTATTGTTATCATGTTATTATTATGTTCTATTTT
CAGTTTTTTTCATTATTTCTTTTTAAATGAAATTTCTGAAATGTGTTACC
CACTAACCTGTGTTAAAAACTGTAGAGCTATACCCACCACCCTTGATCAG
AAATTTTACGAAGTGTGAGCCTGGTAGTAGTGGTAGCACCACTTTATAGA
GGCAATTTATAATTCAACGAAATTTTTATTAGAAAAGTTTGACTGACATC
GAGTATTGTCGCTTTAGGGTACTTACCACTTTAAAAAAAACTCTAATCAA
TGATTTTGTTTGGCAGGGATCGAGAAACTGCCTCCAGAGATTGAAGGTAG
GTATCTGATTGAAATACTTACATCTGTGTTTTCAGATCAAACATACGACG
ACCACTTCAAGAAGTTGGAAGAAGAAGCGAAAAAGAGATTGGGAATTCAT
ATGACATCGCAAAAAAGTCAACAATCATTGACTGTCAAAACTGAAGATAA
TAACACGGCGAATGATACCTGTTATCAACAAGGACCTTCTACGAGTCATT
CAAGAAGTCCTTTAGAACCAGACATTATCGACCTTCGATCTCAACTCGTG
TCACCTGAAGGCAAGTCAACATACACGTTCAGAATCGATGACGATACGAC
CCCTGTTAAAATTAAAGATGAAAGGGAACGATCTAGCTCAAACGTACCGA
TAATTGGAGCTAACAAAAATTATGATTCAAGTCAGAATGTATCTTCAGGA
GTAGTATCCACATCGAACCACAACGTCAAATCGCCATATTTTTCCGAGAC
AAATACAACGAAACGACTCAAAATTGGTTGCAGACAAAACTTGAAAGCTA
GTAATAAGCTTTTCGAGCATGAAACTAAAAGAGAGGACGAATCTAATGAA
GAAAACGACAATGAAGGTCCTGAGTATGATTTTGATACATCTCATTTCAA
AGGGAATCAAACAGAGACAGAAACTGAAACCGATACCGATGAAGGACCAG
ATGAACGTGAGCAGGTGAAATCACCCTCTGCAAATAGCAAGATTTCTCTG
CCATATCCAGTGCTTTCTAAAGATTTTTATAGAAGGTTGGGCGAATCGCT
TCACCAAGAACGAAATGCAGAACAAAGCAAAGAGAATCAAACTAATAAGC
AAACTGAAACTCTTGAATTGAATAAACAGTCGTCAAAAGATTTTGAGCAA
GACAGCGACCCTGATATCTTTGATACCTCAACTTTCAATCAAGGAAAAAC
GAAAAAGAAAGCAAAGTCTTCCATAAAAGTCAAAAAAGAGCCAATGCCGT
CTCCAAAGAAAGATTACAAAAAGAGTGAGAAAAATAAACCTCCTCTTTCA
GCAAAGGGAACTAAGAAACCTGCTGCCAAACGAAAAGGAACGAGTTTAAA
AACAAAACAAAATGAAACAATATCTAAACATTCGAAAAGCACGTTAGAGA
ATTATTTTACAAAAGTTAAAACATCTCCAGCGACAACACCGACCAAGCCC
AATAACACACTTCCATCTTCTTTCTTTGCTGCTCGAAAACCTAAAACGCC
GGAATTACCTAAGCTTATGATAATCGAGTCATCATCCTCTTCGTCAGATT
CTGATATGAACAAAACATTGGAAGACAACCAGAATCAACCTTCAAGTATA
TCAGAATCACCAGTTTTGTTTGGCAGACCTCCCTTCAATAGTACAGTGAT
TAATAAAAGAGACACATCAGTACTNTTTGTTTGGCAGACCTCCCTTCAAT
AGTACAGTGGTCAATAAAAGAGACACATCAGTACGAGAAAGTCATAATAA
ACAATGCGGCTCACATTTTAAAGAAAATGATAATTTAGGGTTATCGAGGC
AACATCGATCACATGTTGCTGGCAATTTTTGTCAACAAAACGAATCGTTT
AGAACAACTGAAAATAAAAGACTGTTTTCTCCAAAGATAAAGTCACCAAC
CGAATCCTCCATGCGGCAAGTAACTTCTAATTTTGGCGAACGAATGAGAA
ATTATAACGACCTATTTGCTGATACAACTTTGACCAGAGATCATTCCAGA
GACTCAGATAATGATAACGATTTTATTCAAGATTCAAGATCAAGAACTAA
AACGAAAGAAGCTAATTCAAATAAAAAACTGTCCAGAACAGATTCTTCAC
ATTTTGTTACCAATAATGAACAGAATTATGAAGGTCACACCAACCAACCA
GTTACTGTTGATCAATCCTTGGAAAATCACATTGATGAACTTGTCGATGG
AATCCCTTCAGAGGGAATGGATTCTGACGTCACTCTCAGTGATTTTAATG
ATGACGTCACTGATGACATCACTGGTAAAGAGAATGATATAATACCTCCG
CCACCAATGGATTTCACATGTGCTTTCGAATCGCAATCTCAAATGTTTTA
AGGATCAAATCTCTAGCAGTTTTGAAAATAAGAGAAGAAACGTTAACTAA
TCGTGCTACCGACTTTTTTAAATCTCTAATTATACCACAGGTCTTAAGCA
TAAAAATCTTCCTCTCTTATCTTTTTTGCTAATACAGTTGACGCTCTCTA
ATTCGACGTTCTTCTTATTCGATACACATCCTTATTCGATGAAAATCCAA
TTACCTTGGAAATCGAATAACCAAGATGAATAACCGAGCGTCAACTTTAC
CTTTTCGTTCAATAGTTTTCATTCACCAATTGTCCCCTTAGAGAAATAGA
ATTTGGAGAATTTTATATTCGTATTTTAAAGTATACTGTTTCGATTTGTT
ATTCATTTAGAGTTGTCTTCCCTTTTTGTAATCATTTGCAGATGATGTAT
TTAATGTAGGTTTTGTTGTAACTGATTTTGTACTATTTTTTTTTTGAAGA
TATTGTAGATTTTTTTTACCTAGAAGTAGATATTTCCTATTATTAAATCA
AATTGTAAATTTATCTTACGATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042206XLOC_042206Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067592-exon-scaffold_471-1575043694:71461..71526TCONS_00067592-exon-scaffold_471-1575043694:71461..71526Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:71257..71338TCONS_00067592-exon-scaffold_471-1575043694:71257..71338Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:71081..71142TCONS_00067592-exon-scaffold_471-1575043694:71081..71142Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:70581..70651TCONS_00067592-exon-scaffold_471-1575043694:70581..70651Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:70374..70452TCONS_00067592-exon-scaffold_471-1575043694:70374..70452Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:70028..70205TCONS_00067592-exon-scaffold_471-1575043694:70028..70205Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:69578..69674TCONS_00067592-exon-scaffold_471-1575043694:69578..69674Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:68644..68710TCONS_00067592-exon-scaffold_471-1575043694:68644..68710Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:68145..68210TCONS_00067592-exon-scaffold_471-1575043694:68145..68210Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:67731..67851TCONS_00067592-exon-scaffold_471-1575043694:67731..67851Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:67486..67558TCONS_00067592-exon-scaffold_471-1575043694:67486..67558Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:67111..67245TCONS_00067592-exon-scaffold_471-1575043694:67111..67245Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:65412..66741TCONS_00067592-exon-scaffold_471-1575043694:65412..66741Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1575043694:64203..65350TCONS_00067592-exon-scaffold_471-1575043694:64203..65350Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:71461..71526TCONS_00067592-exon-scaffold_471-1510915933:71461..71526Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:71257..71338TCONS_00067592-exon-scaffold_471-1510915933:71257..71338Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:71081..71142TCONS_00067592-exon-scaffold_471-1510915933:71081..71142Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:70581..70651TCONS_00067592-exon-scaffold_471-1510915933:70581..70651Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:70374..70452TCONS_00067592-exon-scaffold_471-1510915933:70374..70452Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:70028..70205TCONS_00067592-exon-scaffold_471-1510915933:70028..70205Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:69578..69674TCONS_00067592-exon-scaffold_471-1510915933:69578..69674Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:68644..68710TCONS_00067592-exon-scaffold_471-1510915933:68644..68710Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:68145..68210TCONS_00067592-exon-scaffold_471-1510915933:68145..68210Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:67731..67851TCONS_00067592-exon-scaffold_471-1510915933:67731..67851Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:67486..67558TCONS_00067592-exon-scaffold_471-1510915933:67486..67558Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:67111..67245TCONS_00067592-exon-scaffold_471-1510915933:67111..67245Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:65412..66741TCONS_00067592-exon-scaffold_471-1510915933:65412..66741Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1510915933:64203..65350TCONS_00067592-exon-scaffold_471-1510915933:64203..65350Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:71461..71526TCONS_00067592-exon-scaffold_471-1491911889:71461..71526Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:71257..71338TCONS_00067592-exon-scaffold_471-1491911889:71257..71338Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:71081..71142TCONS_00067592-exon-scaffold_471-1491911889:71081..71142Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:70581..70651TCONS_00067592-exon-scaffold_471-1491911889:70581..70651Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:70374..70452TCONS_00067592-exon-scaffold_471-1491911889:70374..70452Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:70028..70205TCONS_00067592-exon-scaffold_471-1491911889:70028..70205Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:69578..69674TCONS_00067592-exon-scaffold_471-1491911889:69578..69674Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:68644..68710TCONS_00067592-exon-scaffold_471-1491911889:68644..68710Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:68145..68210TCONS_00067592-exon-scaffold_471-1491911889:68145..68210Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:67731..67851TCONS_00067592-exon-scaffold_471-1491911889:67731..67851Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:67486..67558TCONS_00067592-exon-scaffold_471-1491911889:67486..67558Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:67111..67245TCONS_00067592-exon-scaffold_471-1491911889:67111..67245Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:65412..66741TCONS_00067592-exon-scaffold_471-1491911889:65412..66741Clytia hemisphaericaexon
TCONS_00067592-exon-scaffold_471-1491911889:64203..65350TCONS_00067592-exon-scaffold_471-1491911889:64203..65350Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_471supercontigscaffold_471:64203..71526 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00633331	4.1457e-06	0.43775	0	3.65251e-05	0.454836	0.00182453	1.21934e-09	2.19299e-05	0	5.81568e-09	0.713776	0	0	4.38083e-09	4.10957e-05	0.55818	3.95539e-08	0.00172383	1.31989e-09	0.0329835	2.43461e-10	3.33771e-06	0.000121956	1.49613	1.22181e-05	0.383949	4.03473e-06	1.47644	0.00110317
Blast
[Close]
BLAST of TCONS_00067592 vs. Swiss-Prot (Human)
Match: RAD18 (E3 ubiquitin-protein ligase RAD18 OS=Homo sapiens GN=RAD18 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 5.899e-24
Identity = 48/90 (53.33%), Postives = 58/90 (64.44%), Query Frame = 1 
Query:   34 SDWPKEFENLKKIESLLRCSICFEYFHAAVIAPNCSHNYCSLCIRKHVLYKNNCPSCNKDLDDSSLKPNRVLDELVQYFKIARKQLLDLV 303
            S WP     +K I+ LLRC ICFEYF+ A+I P CSHNYCSLCIRK + YK  CP+C   + +  LK NR+LDELV+    AR  LL   
Sbjct:    7 SRWPPGLAVMKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDELVKSLNFARNHLLQFA 96

HSP 2 Score: 82.0333 bits (201), Expect = 5.973e-16
Identity = 55/148 (37.16%), Postives = 91/148 (61.49%), Query Frame = 2 
Query:  782 VNVRKHLPKQCLDVMSDKQLKTKLKEYNLSTKGDKNTLKRRLKDFHTMYNSECDALNPLSAQEIARKL-TLEEEHIKKHGYKPKTLVSTHDRSVTEQHKIDIIH-KHDQTYDDHFKKLEEEAKKRLGIHMTSQKSQQSLTVKTEDNNT 1219
            V+ RK LPK   +++SD+ LK KLKE+ LS +G+K  L +R ++F  MYN++CDAL+P SA EI R++  +E+  ++    K    V    +  TE+ +ID IH K+ + +   F+ L ++A+K  G    +  SQ+++T+  ED +T
Sbjct:  237 VHKRKPLPKTVYNLLSDRDLKKKLKEHGLSIQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEIVREIENIEKTRMRLEASKLNESVMVFTKDQTEK-EIDEIHSKYRKKHKSEFQLLVDQARK--GYKKIAGMSQKTVTITKEDEST 381
The following BLAST results are available for this feature:
BLAST of TCONS_00067592 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAD185.899e-2453.33E3 ubiquitin-protein ligase RAD18 OS=Homo sapiens ... [more]
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