TCONS_00067573 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067573
Unique NameTCONS_00067573
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067573 ID=TCONS_00067573|Name=TCONS_00067573|organism=Clytia hemisphaerica|type=transcript|length=2156bp
ACTTGCTCTACGACCCACATTATTACGGTGACCCATTATTATACAACATT
TGGACATGGATTTGACTATTTTTAAAGGAATTATTTTACTCTTAATAGTG
CTGAAGTGATGGCTTTTGGCTCTCATGTTTACAATCTTTTGTTTGATTAc
aatcaaaagaatttattaGAAGGAGATAATCGAGATCAGCTGAGTCTGTC
ATCATCGTCGTCATCACCTTCTGCCTCTGCAGTTTCAAAAGAGATACACA
TGTCTTTTGTATCAGCAGCTACACCATTTAAACCCAGTGGAAAAAATGAT
CACAGTTTCTCTGACTTAGAGGCTGTGAGAATACAAGCAACTTGCATATC
AAAAGCGCATTCAGCTGGAGACCGCAAAATCATGACAGTAGACCCAAACA
TCACATCATATGCCAGTTTGTATCTTCTTCTCAAAAAGGCATTCAGCTTG
GAGCAAGACTTTGATATAGTGTACCAACTACCCCGGAATGCAAAAAGTGA
TCGTCCTGATGTTTTCCTTTCCTTGACCTCTGACTGGGATCTTGATGCTG
CATTCCATACTGCCACCCGACCCTTCCTTCAGTTAAAAGTACAACCTTTT
GAAAAAGATGtGATCGACGGTTGGGATATAGTTCAGCCTATTCACACACC
ACAAGTTAAAGATATTAAGTCACGGCAAGCCCACATTCCACTGGCGGTCA
CTTTGAAGTATGACATCACCAAAACAATCGGaaaagtttttgatgttttt
gcaaCAGAAAAACCATCCCTCTTCACCAACACTGAATGGATGGCTTTCTT
TGATGCAACTGGTCGTATGTCTTCCATGAAGGATTTGAAGACCtctattt
ttgtcaaaaatctgGAACCTGATGTCAGAGCTGATGCCTGGCCACATCTA
TTAGGTGTCTTCCCTGTGGATTTAACTTTTGAAGAACGAACACGGTTTCT
CTTTATGAAGACACAGGTTTACAAGCATTTGAAGGAAAACTGGATGGCCA
AAAATCCACGTGAAATAAAGGGTTTAACACACATGATACAAAAAGATGTT
TTGAGGACTGACCGCACGCACCCTTTTTTTAATGTCAAAGAAGACCACCC
TAACTTGGTGTCTCTGTTTAATATTCTGATCACGTTTGCATTCAATAATC
CAGATATATCTTATTGCCAGGGGATGAGTGACCTTGTTGCCCCACTACTA
GTTGTATTGAACGATGAGATTCTAGCTTATTTATGTTTTTGCAAAGTAAT
GGAAAgacttaaaaataactttttgttaaaAGGAACCGCATTAATGGAGA
AGTTCACACAACTGTCAGAGTTATTGAAGAAAGCAGATAAACCTTTGCAC
GATCATATCCAGACATTAGATGGAGgtcacttttatttttgttatcgtAT
GTTGTTGTTAGAATTGaagagggaattcccctttgaAGATGCCATTCATG
TGATGGAGAGCATTTGGAGTTCAACGCCACACCATACTGAAGATGAGGAT
TGTGAAATGTCTTTTTATGAAGAACTCTTACAAAATCATCTCAATCACGG
AAACACGTCTATAGATGAATCTATCAAGTTCTCAGGCTTACCACCACCAA
AAGACTTANCTCTTACAAAATCATCTCAATCACGGAAACACGTCTATAGA
TGAATCTATCAAGTTCTCAGGCTTACCGCCACCAAAAGACTTGAATGATG
GTTCACCGTTCCCGTTGTTTCTATGTCTGGCTATATTCATTTTAAACAGA
GAACATTTATTGCAGTTAGACGAATACACGATGCTTGCGATGCATTTTGA
TAAGTTGTCACGGAAATTGGATGCAACCCATGTTAAGGAGAAAGCGAAAT
cgttgttttttaaatatctgaAAGATAGTATTGAAGAAAACCGAGCAAGC
TCCTTACTGAAagaatgtttggaaaacacgcATGGCACATCATCCACCGC
AGCTCAATGTTGAAAAATTCTTACTCAGCATAAGAAATGATTTGTTTTTT
AAGTCTGTTTGCTATACAtttttatttgtcttttttaaataatttatata
tatatttggATTTATAATTATTTGGTGTAAATTTTTGGTAATCACATTAA
GAATTGTAGTCATCTTACAAAGGGTATTGTATATCCGTAGAAAATATATC
TACTTT
Run BLAST on NCBI

transcript from alignment at scaffold_471:385317..397501+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067573 ID=TCONS_00067573|Name=TCONS_00067573|organism=Clytia hemisphaerica|type=transcript|length=12185bp|location=Sequence derived from alignment at scaffold_471:385317..397501+ (Clytia hemisphaerica)
ACTTGCTCTACGACCCACATTATTACGGTGACCCATTATTATACAACATT
TGGACATGGATTTGACTATTTTTAAAGGAATTATTTTACTCTTAATAGTG
CTGAAGTGATGGCTTTTGGCTCTCATGTTTACAATCTTTTGTTTGATTAc
aatcaaaagaatttattaGAAGGAGATAATCGAGATCAGCTGAGTCTGTC
ATCATCGTCGTCATCACCTTCTGCCTCTGCAGTTTCAAAAGAGATACACA
TGTCTTTTGTATCAGCAGCTACACCATTTAAACCCAGTGGAAAAAATGAT
CACAGTTTCTCTGACTTAGAGGCTGTGAGAATACAAGCAACTGTAAGTAT
TAttctctaaataaataaaaatgtcaaagaTAGAATAAAGAGAAGTATAA
TACAGAATGAGAGAAATGAAGGAAAGGAGGGAGGGGGCGGCTATTGTTTG
TGAAAAATAGCTTATGGTTCCTGTCACCCCAACTTTCGAAAAACAGTGTC
AGTCAGGATAGAAAAATACTGTCGGTCCAGCTCACGGTGCAATCCAATAT
GCTTGATTTTTTGAGGACCCTCGAACACGTTGCCTGGTCCGGATTTTTCT
GGCGGTCGCGTCTAGGCAGataaggaccctgccgacgcaccggacttaac
gaacaccggacacgcgaaagtccggtgtaaaatgagaattttttttacac
caCCGTACACTTTCTACActggacttaaggaagtcggatgtccggtgtcg
gagaagaatatttttcccaccggacaatcaaaacaccggacatgaccagt
ccggtgcgtccggtgtttcttaattttttgtttcataaatgtctggCGTC
CAAAATttcctgtatgcaacaccggactgacaccgaacttattgcgtccg
gtgtaacgcaaggatactttttgccaccggacaaatacaccggacagtcc
ggtgcgtcggcagggtcctggcAGATATTTaaactaaaacattttcaaaa
acgcCCGTGGGActgtgagatcaggtaactttcatcagtggaggctaaca
tgcatcgccctcaaatgaatgacctggctggttattaaaatacaaagtta
aatcaaaacaaaaatggtagagcaGAGCTGCGAGCGTAGCTGcctagttg
tattttaatgaccagacaggccattcatttgagggctatgtttGCCGCAA
GCAAAAGTTGGTAATGCAAAGTCTCACAAAATCGCATCTAGCagacacaa
aaaaaaaactccataACTGGCAGCATCATGCGAGAGCAATCagaatacaa
aataaacaaatttcaaaggcCCATTgtcaggggggggtcggtagtaaaat
ctcagacataatgacgtttaccgCAGTGGTGGTGctacgaaaaatcgaaa
aaaaattttactacccagggtagttaaatactaaaatgggtggtatctct
ATGTgttgaatgttgaaaaaaagttaCTACCTAGaacgtagtggtctaaa
gaaacgactattcttttttagaatcaaccttacaatctagtttttatatt
tataaaaactagattgctgacgtgtgaaaAGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNagacttaactcgatgttacaatccaattatt
gaaagtttgtctcggcctttttataatgagcgagacatacgttctctgat
tacgcaattttcatattgacaatttcgaggcattttgatgtaactgacag
ATGCTCTAAccacttgagctaaccacgcttgggacagtctgagggaaagc
ttgaagttatgagaaagaaaaaggaaagaaagaaacgagaagaaaattag
ttcccgctttgatgttattatcaaaacaaaaggatcattcacgccgacat
tccttttcacacgtcagcaatctagtttttataaatataaaaactagatt
gtaaggttggttctaaaaaagaatagtcgtttctttagaccactacgttc
taggtagttaaaactggtaaaattagcaaattttagctatttttgtaatt
cttttgactttttggatgacttttctgaaaaaatctgtgaaaatctttat
aatttgaaaaaaatttctgttggaaagttgttagcctgggaatccatccT
ATAGTCTAAATCAACTCAGGTAATCGTTACGCACTTTTCAGAGAAAGGTT
GATTTTGTGGCTAATTCTTGCGATTAAAGGCTAGTTGAGCTCTTTTTAGA
TAGCTAAAGCATTTACCAACCTTTTTTCCATTCATGTAAGCTATCTTTGA
TAAGCCAAAATTCATtaaacaacatttttcaactgcgTAATGATAAGGTG
CCAAATCTGCAATTATTCCGCATTTTTCCCTATCGATTCCTTGAATCGCA
AAACTGTTAAGAAAACCAATTGGCTATTAAActgtgttgaaaagatatta
cttGAAACAATGTATTGGCGACTTTAAGCTTGAATGGTAACTTGAAAAGG
TGCGTAATGATTGGGCTACCCTGTTAAATTTTACGCACCTAATTGATCCG
CGGCTCTTGTTATTTATCACGGAatattcaagaaaaaatatttggtGGGA
TAAAACCTACTTGAATAGGCTGCTTCTTAGCAACAACCATTTGCGCGCTA
TCTTGTACCCAGATCTCCTCAGTTCAAAAGTTACttcatccttctaaaat
atCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTTACTTCAAGGT
TAGAAACCAAGTATATCATGAAATATTGGTGATTCAAAAAGTGCGTAAGA
ATTAGGAGTGCGTAACGATTACCTGAGTTGACtatatgatttcttctttg
ataaactgatggcgaaatgtatagcatggtgcgggctgagagtttgaatt
actcagatcctaataacggttgaaaacatagccaatcaaattttgttatt
cttttactggtcacactttcttagagaaagcgcaactttcgtttttattt
tagtactgtaagtgaggacagcactaaattcgaatttcccactgtaaaaa
atgtgagtccaatattggactcacagctcgaacccgtcttgtgtacatca
aattataaaaaaacacacaacggttctcctgtctagaaagttgtttgctg
caaacaaaaatttctcgaaattttttgtcaataaaaaaaaagactttaat
tctaagggcaaaacaataatttttgcACATTAAGTGCAAAATGTGTCACA
Ggaataataattttttagctttttttgtaaaatcagtccgaaaagcaacc
aaaaaataggtggtctctaTGACAacttgtcccaaaaacttttactacca
gggtagtaaaatatctcccaagagtctgggtggtggtatgtaaaaattct
tttactactcatatatgtctgagattttactaccgacccccctgtCATTG
TAAGTGATTGAGTGAAGctatcatcaaaaaataaaaaacaaacaaacctt
tAACTTTTCAATAatccaaataaacaaaatattttaaatgaattgatgtt
taagtttgaaaacaagCACCATTTCCACCATAcactttttaaagcaaaaa
acatcattttACTGAACTGCTGCTCTTCCCGGGCAAATAATTTCTCAGAA
TGTCAGAGAGTCTGGTGCTGAATATAGTTTAGTGGTTCAAGCTTGTTTTA
GTTCTCTATCTTTAGATAAAGCCTGAAAACCTCATCTGAGACGAGGGTCA
TAAACAATCTTTGTCTATTTTGAAGTTGTACAATCTTTCTATATAATAAC
AAAGatatttaaccaaaatttgtttCATTAAAGTTCTTTTCTTTCAGCAA
AATAGGCCTTTAGTAAATATACCCCtggttttattttgatatttacaATG
TGATTTTATAGCGGGAATTGGGAACCGGCTAGATTgtgtgatttgattgg
ctgaaTGAGCAAACGCGAGACTCTGCCTAGGACTTTTTACCCGCGTTTTA
AATGCGTTTACGGCAATGTTTATTCtttacactttcgttttcaaaatctg
ttGTACATGGATTTTGGCTTGTGACGATAACCTTGCGTAACATCTGTGAT
GTTTgcctctactgatgcaagttacccaatctcacggtaccgtcaactac
tctaacttgggacgattggtcgaaacatgggactgttgatataaCTCTat
atactgttaaatctctttactactttgacaacaaatttgttttgataact
ccaccaagtttgtcaatcatactttctgtcataacatgtcacgataactt
tcactgatagacctttttgcctttccatccgccatattgaattgtatgca
aaaattatggtgaccgaaattgccgtggtgaaattcccttaaaaAGTGGA
AAAGGCGCCTAGAGGCTTTCACATATTTTATTTTACCgtaccagacggta
ctaatcaatAAATTCGATTATCAAAGTAATCCataatgatcgaagtaatc
cataatgatcgaagtaatccATAAGATTGAAGTAATCCataatgatcgaa
gtaatccataatgatcgaagtaatcgacaatgatcgaagtaatcaaacaa
ccaaaaaccattaacaatcgaatttcaagtatcaaaaaaaaattagtatt
cTATCAATTTCTTAACAACACTTCAAAGACTCGATAACCGTTTGAGTACT
TAttctttgattgttattgattactttcgataacttcgataaccaattga
ttacttcaataccgtgagatcgggtaattTGCATCAGTAGAGGCTAAAAT
GCAtaaccctcaaatgaatgacccagccagtcattaaaatacaaagttaa
atcaaaacaaaaatggtagagtagagctgcaagcagaGATGCGTAGttca
attgttttcaaattttgctgcattgaacaaataaaaaatgtgactcccca
agagatttaaagtacctgaaaatgggACCGGTCTTTAGACGGTCTTTTAA
GGGTCAGTAAATGACCGGTAAACATTTACCAAAAGGCCTCTACGAGCCTA
GTTAATTGAGGTGTTGCTGCGAATCAATCCAATCGCCCGGTTGACATCCT
TTTACAACAATTTTTGATGTAATCGTTACTAAAAATCACTAGCTAGCGGC
CTGGACCGATCTAACGAGCGGCCACAAGCGGCTAGAAGCGGCCAGGATTG
TTATAGATCACATTTCTAAAGGGTCTGGAGGCcgatttaaaacaaaaatt
tgagcaCTACTAGACCGCTCGTAATACCGGACCAAGGCCGGTCTGAATTT
TTTTGTCTTGCTAAACTTTTTTATgttgtactctcgggtacctaatagcc
gggggattggaataagcgggggttggaaaaatctcaaaacttaacaagtg
ggggggggttggaataaaaatgtcctggatggaaaatttttgaaaagaag
tctaatacagctgaattaggacaaaagagggaactttcaaaaacattttc
ccgaaaattaataagcgagggggggggttggaataagaatatcctgggtg
gaaaatttttgaaaaattaattagcaagGGGGGgacagctattaggtacc
tgagagtaatcttttcttcaggcaaaaaaggttaagaaaaaaactgttgc
CCATTTTGCGTGaaagtggagaccagccttttttcaataagcttccttat
tcaatgaaaatccaattccccttgaagatcaaattagagagcgccaACTG
CATTAGTAGAAGTAAATTTGTTAATAGAATGAAATAATTTGTGTGGCAAT
ATATTGTGTGCCTATTTCCAgttgcattttttttgtaaacacGTATAATG
ATTACAGCATAAcaattattatatacctgtctAGGTGCTTGTCAGGTGTA
AGATCAGGGCCCAATGATACATTTTTTGTCTCACTATGTCATCCAAAAAT
ACATCTTATCAGAATCTCCTTTAAAACAACGCTAAAATGGATCCTTCGAA
ATGtggaggtaaacaaacattTTGAACCCTAAAAAGGAAGCTTAAACCCC
ATCTAGTCGGTTTTAGGTTTCAGTGCCTGTCTGTGTCTACCTTGTTATGG
TATTCCCTAACAGACTTTTGCATCTTTGCTGTATTTCTAACTCGACTCTT
CACTGGATCTGAAGGAAAGTGAAATAAATTAACAATCTAAGATGCTAGCT
GAAGCTATTAGAGAAAGAAAGACAATAACTTTGATGATCCTTCAGCAGTT
TTGGGCGCTTATTTTGCATAAAtctttttggtgtttttcaagGATTTTCG
CTTGAAATTCGCTATTTTGGGAATTGTTTACCTCCACAAAGGTGTTAAGC
AGCTTCACAACTTTTTCTCAACATTCTCAAATTACATCTCTCATGTTGCT
GATTTTCTTGTCATTATTTCATTACATTCAGCAAGTCACTCTAGGgttaa
aaagaagaaggaatgggctttactttaatcgtagaaattttagcgaggcT
AATTTTAGCGACTCACTATTTCAAAAGATTTAGCGTGGATAGATTTTAGA
GAATACTCGCattacattattgattgaatttgtattctagcatttctttg
cactgaaacccttctcATTGattaaaatgtatcaaggcaatttataacca
gaaattttgcgcggataaattttagcgatctggcgaTTTGGCATGTTTTA
gcaagatttattttagcgaaaaaagggaaaactcgctaaaacgctaaaat
tagtctccctaaaatttctccaattaaaataattcaaaaatgttttttct
ataGGCACTCGAtagtgaaataaatagaatcacaaagtgctcgagaaaaa
attcaagcaaaatatcaagaaataaagaactaacttaATTGCTACATGGC
GTTTCATACTGGCGCAATCTTCAGCCAATGTAGTGTATtgcatgaaggta
ataaagatatagatggagagaaaacgtctcggtaatgacctaaatggtcg
ttgaaatcttttataaatctattcaaagtgGCTTTTCTTTGGTGTACCAT
Cattgaaagcaaaaaaatccgaaatataaatttataagaacagaagtgag
aatgttatcctgattgaaataaacatattatgcaaaaagttcttgttcaa
acgtgatacaaaaatatttttctcaaagtaaggttacaatagttctatga
ttccatatcgatgtatttttgggcaaacactgtgctaattttgagagttt
cagcacattttccttgaaaatttcttcactagaaatctttacgtctaaaa
gggagggggctttcaaattctgatggatgattaataaaaggttacctaat
cgtaatatagaattctttttgaaatttatcgataattttatgagagggga
cccttaaaaatataggattttgtgcttgttacggaaagctttttcttttt
ttgatcaacaaagctattatctcacaataaagttgttaaaaatccaacat
ctttttattcagttttttatgaacttaaatattcccatgagtgcacacaa
aattaatcactttttcccattgcaactaaggagccgtttgcttccgatga
ttagGTACAATGAAACAAAAGGAGTTaattctccatctatttcttattac
ctTCATGTGTATTGTAGATTTTATTTCGATGAGTAAGCACTTGGTTATCA
TTATAttctgactctttttaaaacttttccaaAACTTCGGACATTTCAAT
TAATCTTGTTAGGATCACCGGGGTGacacaaaataataaaaaaacaatat
tgaTCCTGGCCTTGGTTTGAATATCATTCAACTGCATTCGATTGTTGTTG
AACTGCTTTCAGTTGTTCTTTAAATTACTGACCCTTTGTTATGAAAAAGG
TTACACAACCCTGTACAACCACTCGTTTCCATGGAAATAACACCAAAGAA
GAATGAATGGGTGTTTCTTGAGCAAGGAGTAATTATTTTTATAGCCTCCA
TGTAAGCAGACCTTTCTGGTCTGAATAGAATAAAATGAAAGACATGCTGT
GACTTCCACTAGAAAGTTGGTTCATTGGTAGCTATGAAATTATTGATAAT
CgatttatcaaaaattgatatttctgGTGAAATGTCTAAGCTTCGCAACC
TCAATTTGATTTTAGTCAATACTTTTCTGGCTGAAGAGTTGAAGAAAGAT
ATTCTTAAAACAagaaattattactttgcttaaTTACTCCTTTACGTTAA
CTACttacaatatcaaaagaaaagtaataaCTTTTAAGATTATCAGGTAT
ATTCAAGGTGAATTGTAAACTTAACTTAAATAATATGACGTATGTAACCG
GGAGCTATTGAATTTACCAGCAAGAAtgcttgaaaaatgaaaatcttgtt
TTCAAGTTTAATATTGTAATTGTGTAATTTTCTTTACCTTAATAGTGCAT
ATCAAAAGCGCATTCAGCTGGAGACCGCAAAATCATGACAGTAGACCCAA
ACATCACATCATATGCCAGTTTGTATCTTCTTCTCAAAAAGGCATTCAGC
TTGGAGCAGTAAGTACCTTTTTTTAGTCACCAGTATTTTCATGATTCACT
GGAAGTTTGCTCCTAATTTAGCCCTCAAATTCTTGTTACTGTTTAGAATA
CCTTTTTCGTTCTTTCAAGCTCGCCACAAATGTGACTtcccaagcgattt
aaagtacctgaaaatcagGCCGGTCTTGGTCCGGTATTACGAGCGATCTA
GTAGcagtcaaatttttgttttagatcgGCCTCCAGACCTTCTAGAAATG
TGATCTCAAACGGTCCTGGCCGCTTCTAGACGCTTTTGGCCGCTCGTTAG
ACCGGTCCAGGCCGCTAGTTAGTGATTTTTAAGAACGATTACctcaaaaa
attcttttaaaaggaTGTCGACCGGGCCGGTCTAGGACCGGACGCTTCGC
AGCGGCAGCTAAATTAATTAGACTCGTAGCGGccttttggcaaattttca
cCGGTCATTTACCGGCCCTTAAAAGACCGTCTGAAGACCGGTCCCATTTT
CAGGCACTTTAAATCACTTGGGGGGTCACAAATGTGCTCTCCTCGTCTGA
ATTTTATGCATATGTCTACAAGTATTTGGATACAAAAACTAAAGTTAAAC
GGGGGGTATTTATGTTCCACTTTTTCTNTTTGGATAAAAAAACTTAAGTT
AAACCGTGGTATTTATGCTCCACTTTTTCGAAACTCTAATCCTATACCTA
TACGAGGATTTAAGAAATGCTTTGGTTTGTCTTTGGTTACTAAAGTATAC
TGAGATATCTTAAATGGGGAGAAAACTCAATAGCATAATCTTTCGTTACA
TTACAGAGACTTTGATATAGTGTACCAACTACCCCGGAATGCAAAAAGTG
ATCGTCCTGATGTTTTCCTTTCCTTGACCTCTGACTGGGATCTTGATGCT
GCATTCCATACTGCCACCCGACCCTTCCTTCAGTTAAAAGTACAACCTTT
TGAAAAAGATGGTAAGATACttaattcaaaataaatgtGATTTCAATAAA
TGTTgtgaaaattctttaaaaaattatgcaaatgtTATAAAAAAGAAGAT
ACTTTGTTGAACTTATccctttgttttgaattttgatttgatagtaattc
aaaaataaaattgactttaaagtatttcttttttagtGATCGACGGTTGG
GATATAGTTCAGCCTATTCACACACCACAAGTTAAAGATATTAAGTCACG
GCAAGCCCACATTCCACTGGCGGTCACTTTGAAGTATGACATCACCAAAA
CAATCGGaaaagtttttgatgtttttgcaaCAGAAAAACCATCCCTCTTC
ACCAACACTGAATGGATGGCTTTCTTTGATGCAACTGGTCGTATGTCTTC
CATGAAGGATTTGAAGACCtctatttttgtcaaaaatctgGAACCTGATG
TCAGAGCTGATGCCTGGCCACATCTATTAGGTGTCTTCCCTGTGGATTTA
ACTTTTGAAGAACGAACACGGTTTCTCTTTATGAAGACACAGGTTTACAA
GCATTTGAAGGAAAACTGGATGGCAAAAAACCCACGGGAAATAAAGGGTT
TAACACATATGATACAGAAAGACNGGCCAAAAATCCACGTGAAATAAAGG
GTTTAACACACATGATACAAAAAGATGTTTTGAGGACTGACCGCACGCAC
CCTTTTTTTAATGTCAAAGAAGACCACCCTAACTTGGTGTCTCTGTTTAA
TATTCTGATCACGTTTGCATTCAATAATCCAGATATATCTTATTGCCAGG
GGATGAGTGACCTTGTTGCCCCACTACTAGTTGTATTGAACGATGAGATT
CTAGCTTATTTATGTTTTTGCAAAGTAATGGAAAgacttaaaaataactt
tttgttaaaAGGAACCGCATTAATGGAGAAGTTCACACAACTGTCAGAGT
TATTGAAGAAAGCAGATAAACCTTTGCACGATCATATCCAGACATTAGAT
GGAGgtcacttttatttttgttatcgtATGTTGTTGTTAGAATTGaagag
ggaattcccctttgaAGATGCCATTCATGTGATGGAGAGCATTTGGAGTT
CAACGCCACACCATACTGAAGATGAGGATTGTGAAATGTCTTTTTATGAA
GAACTCTTACAAAATCATCTCAATCACGGAAACACGTCTATAGATGAATC
TATCAAGTTCTCAGGCTTACCACCACCAAAAGACTTANCTCTTACAAAAT
CATCTCAATCACGGAAACACGTCTATAGATGAATCTATCAAGTTCTCAGG
CTTACCGCCACCAAAAGACTTGAATGATGGTTCACCGTTCCCGTTGTTTC
TATGTCTGGCTATATTCATTTTAAACAGAGAACATTTATTGCAGTTAGAC
GAATACACGATGCTTGCGATGCATTTTGATAAGTTGTCACGGAAATTGGA
TGCAACCCATGTTAAGGAGAAAGCGAAATcgttgttttttaaatatctga
AAGATAGTATTGAAGAAAACCGAGCAAGCTCCTTACTGAAagaatgtttg
gaaaacacgcATGGCACATCATCCACCGCAGCTCAATGTTGAAAAATTCT
TACTCAGCATAAGAAATGATTTGTTTTTTAAGTCTGTTTGCTATACAttt
ttatttgtcttttttaaataatttatatatatatttggATTTATAATTAT
TTGGTGTAAATTTTTGGTAATCACATTAAGAATTGTAGTCATCTTACAAA
GGGTATTGTATATCCGTAGAAAATATATCTACTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042199XLOC_042199Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067573-exon-scaffold_471-1491911889:385317..385658TCONS_00067573-exon-scaffold_471-1491911889:385317..385658Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1510915933:385317..385658TCONS_00067573-exon-scaffold_471-1510915933:385317..385658Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1575043694:385317..385658TCONS_00067573-exon-scaffold_471-1575043694:385317..385658Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1491911889:394662..394774TCONS_00067573-exon-scaffold_471-1491911889:394662..394774Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1510915933:394662..394774TCONS_00067573-exon-scaffold_471-1510915933:394662..394774Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1575043694:394662..394774TCONS_00067573-exon-scaffold_471-1575043694:394662..394774Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1491911889:395573..395727TCONS_00067573-exon-scaffold_471-1491911889:395573..395727Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1510915933:395573..395727TCONS_00067573-exon-scaffold_471-1510915933:395573..395727Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1575043694:395573..395727TCONS_00067573-exon-scaffold_471-1575043694:395573..395727Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1491911889:395903..396288TCONS_00067573-exon-scaffold_471-1491911889:395903..396288Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1510915933:395903..396288TCONS_00067573-exon-scaffold_471-1510915933:395903..396288Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1575043694:395903..396288TCONS_00067573-exon-scaffold_471-1575043694:395903..396288Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1491911889:396342..397501TCONS_00067573-exon-scaffold_471-1491911889:396342..397501Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1510915933:396342..397501TCONS_00067573-exon-scaffold_471-1510915933:396342..397501Clytia hemisphaericaexon
TCONS_00067573-exon-scaffold_471-1575043694:396342..397501TCONS_00067573-exon-scaffold_471-1575043694:396342..397501Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_471supercontigscaffold_471:385317..397501 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.19842	4.23616	1.29942	0.87238	8.655	6.66668	8.61861	8.37064	4.42662	6.44875	6.10669	4.73175	2.84559	2.42503	1.157	0.795989	3.6215	2.36764	0	0.918767	1.82999	0	6.01338	5.74607	8.42793	8.99796	1.02842	1.77474	2.46393	4.674
Blast
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BLAST of TCONS_00067573 vs. Swiss-Prot (Human)
Match: TBC25 (TBC1 domain family member 25 OS=Homo sapiens GN=TBC1D25 PE=1 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 6.511e-76
Identity = 148/398 (37.19%), Postives = 231/398 (58.04%), Query Frame = 1 
Query:  376 KIMTVDPNITSYASLYLLLKKAFSL--EQDFDIVYQLPRNAKSDRPDVFLSLTSDWDLDAAFHTATRPFLQLKV--QPFEKD-VIDGWDIVQP--IHTPQVKDIKSRQ----AHIPLAVTLKYDITKTIGKVFDVFATE--------KPSLFTNTEWMAFFDATGRMSSMKDLKTSIFVKNLEPDVRADAWPHLLGVFPVDLTFEERTRFLFMKTQVYKHLKENWMAK-NPREIKGLTHMIQKDVLRTDRTHPFFNVKEDHPNLVSLFNILITFAFNNPDISYCQGMSDLVAPLLVVLNDEILAYLCFCKVMERLKNNFLLKGTALMEKFTQLSELLKKADKPLHDHIQTLDGGHFYFCYRMLLLELKREFPFEDAIHVMESIWSSTPHHTEDEDCEM 1509
            +   VDP ITS   L  +L +AF L  +++F I Y L R+      +V+LSL SDWDL  AF TA++P+LQL+V  +P E   +++ WDI+ P  +    V   + R     A +P   ++   + +T+ KV  V +          KP L ++ E+  + +  G++S  ++L+  I+   +EP +R   W +LL V+P  LT  ER  ++  K++ Y+ LK  W  + NP +++ +   + KDVLRTDR HP++   ED P+L +L ++L T+A  +P +SYCQGMSDL +P+L V++ E  A++CFC +M+RL  NF   G A+  KF  L  LL+ AD   + ++Q       +FCYR LLLELKREF F+DA+ ++E  WSS P    + + E+
Sbjct:   52 RSFAVDPQITSLDVLQHILIRAFDLSGKKNFGISY-LGRDRLGQ--EVYLSLLSDWDLSTAFATASKPYLQLRVDIRPSEDSPLLEDWDIISPKDVIGSDVLLAEKRSSLTTAALPFTQSILTQVGRTLSKVQQVLSWSYGEDVKPFKPPL-SDAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRKSREYEQLKSEWAQRANPEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHLRALHDLLTTYAVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLLRHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPEHEVEL 445
The following BLAST results are available for this feature:
BLAST of TCONS_00067573 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBC256.511e-7637.19TBC1 domain family member 25 OS=Homo sapiens GN=TB... [more]
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