TCONS_00067560 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067560
Unique NameTCONS_00067560
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2873

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067560 ID=TCONS_00067560|Name=TCONS_00067560|organism=Clytia hemisphaerica|type=transcript|length=2873bp
GGAACGAATTCAACAGTCAAGTTCTAGAggaatttggaaaatcttttgat
tttgtcAACAAAGATGTGGACGAAGCTTTACGGCAATTCCAGTCTTATTT
CAAATTAACCGGAGAAGCACAAACTGTTGAAAAGTTCTTGCAGGTATTTT
CAGATCGTTACGTGGAGTGCAATCCAGGTCGCGTATCCGACAATCCGGAC
ACTATCCTCCTACTGGCGTTCGCATTGGCCATGCTGAACACGGATTTGCA
CAATCAGAACGTCAAAAGACGGATGAGCCCTGAAGACTTCATGAAGAACT
TAAGAGGAACAGATAACGGAAACGACCTGGATCAAGAAATGTTGAGGAAT
ATGTACATTCGTATTCAAAAGAATGAATTCGCAACGGGTGCTGACCACAC
AACGCAACTTCATCAAATCGAGAACAGTTTCATTGGAAAGACACCTAGTC
TAGCAGTACCACATCGGCAGTTCGTCAAATTGTACACTGTGGAAGAAGTG
CACGAGACCAACCGTAAAGACAAACAACTTCATAACAGACTGGCATTCTT
GTTCAATGATCTACTCATTCTTGCCAAACCACGTGGTAAAGGAGGTAGCC
ATGGAGCAGGTCACATGTTCACGTGTAAAGCTTCTTATCCTCTACTTGGT
AAAAAAGTTGCAGAGTTCAGCAACGAACATTATTCACTGGGTGTACTTCT
TGTGGGGCGGTTTGATAACAAAGTGGTTGCCACTTTCAACATGAAAGATG
AAAAGACGAGGCGTTCTTTCGTCGACGAACTGGATGAATATATAAGAGAG
ACCACTGGTATGGAAAACATTCGTTTAGCACTTAGCAAAGTGAATCAATT
AACGTGGCACAATCGAAGGAAGGACGACGGCCGCACCAAATCTCTTCTCT
TACAAGACTCATCGTCATCATCCAAAATGGAGGCCGGTGGAGCGGAGACG
ACCAGTCTAACAGACCTTCGCATCGGTTCCAACCATTCCAACGAAGGGGA
GAGTAATCAAAATAAGATCATGACGTCAGCTTCCATGGGAGATATCAATG
AAGTTGAATCAGATTCTGAAGACTTTGAAGGAATGCAAAGAACAAACAGC
GCCAATTCACTTGGACCTCCCAGGAACACTAATTTTAGCACCACTAAAGG
CTCGTCTCAAACAACGGGCAATGGTCACTCAATGTCGCGTACCACATCCG
TCAAAACTTTATTCGGCCATTGGGCGCCCAAATTCCGTAAATCGATGACG
TATAATGACAGTAGACGCCGAGGTTCGTCTTCTGTCAACGAAACTGACAC
GCCACTTATAGGGCGCGACCGTCGCCATCATTCACACTTACAAGCTCGAG
ATATCTCGCCCTCTCCGCCCGTTAAAAGGAACCGAACACCCTCGGTGTTA
TCTGAAGGATCGAATGCCGAAAAACGTAAAAGTGCTTTTCTATGATGAAT
TGGTCGATCCGTGCAAGTATCGAGTAAATCGGGTGATGAAGATCTCCAAA
AGTGTGGGGCTTTGAATCTTTCCTGAAACGGTCCATGAATTCAACACCTT
CGCAACTTCCGAGATAAATTTCTTGATGATTTGACTGGTGTTTGATTTCA
AGAATCCTTTTGTTGAACGGGGTAATAAACTCGCAATGAACTTTCAATAA
TAGACAGTAATTAAAATGCAACAGGAAGAACCGGATTCACAAGAGGGCGA
GTATAAATCACTACACCTTACTACACACAACAATTGCATattttaattga
aggtagaAAGTATCTTTTCACAATGTTTGATTTTGGAAACTCTGTTGGGA
TGGACTATGATCACACGGATTGGTCGGGAAACATCCGAACCTTCAGCCtg
atattttcaatgaaatttggtcaaatttgttttGAGCAAATGCAACTGTT
GTGCAATTAGACACAAAACGTTTTATAAAGTAAAATACTGCAAAAAATGG
AATTTCGTAATGATAAAAATGATGTTTTATAGATGAAGGTTTTAGTTTGA
TTCACGTGTAAATAACAGTAGAAGCAATGTAGcaataaatcaaagaaaat
tacAAGACGACACAGCACTGGCTAAGGAGGCTTTCAAAAATGCTTTAGTT
ATCATTACTAAGTTAGAAATTAAAGTTGTTTTATAATATGGATTTAGAcc
aagatttttttcataataatttCAACTTCTCCTTCTTTCAGAACACCTTT
GCATATGAAAATGATAAGAATTTCGTGATCTGGCAAGTACTCGAATCTCC
TCCTATCCCATTTTAAAACCGATAATGTACTCATTTTTATATCAAACGTC
GAGGTTCGAAATCTTGGTTTAGCCAATGTATtgtttagctttttgttcaa
ttttcttttgttacaaacaaaaaacaagttgatcacgttaccaaaatctc
cttttgggattggtctattttctaatcacatgatcaaaaagtttgcaaaa
tagatcgattttggtacgtaagctcatcttttaacaataaaaagagacaa
aaaagccttccagaccagtgatTATGGTTTAGCAAATGCATTAAGGCAAA
TCCGAATTGTAGTACAGAATATTTTGAGACATCCTGTGAGGAATAAATTC
TACCATCCAGTCCTTCTTTTTACACACCTTTAGTTTTTTTTACAATAAGA
TTTACTTTAGTAGAATGTTTGATACGGTTTAACTGATTTGATTTGAAGTa
agattattttattattttttgttacaaTTATACTTTTTTAGCATTATAAA
AGGAAaataattatcaattttttcgTAAACAATAGCAATATGCGACGTTT
TTTAAGAGGATAAATTATTGCGAATGATGATAAAGTACAATCCATTGATA
TAAAGACACAATCAAACTGAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_471:201172..209550+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067560 ID=TCONS_00067560|Name=TCONS_00067560|organism=Clytia hemisphaerica|type=transcript|length=8379bp|location=Sequence derived from alignment at scaffold_471:201172..209550+ (Clytia hemisphaerica)
GGAACGAATTCAACAGTCAAGTTCTAGAGTAAGTCAGCTACCTCTTTGTT
GATTGATAGTGCTACATGAAATCTTCTTCTCTTTCAGTGGTTTTGGGCTG
TGCTCCAGAAAGTTGGACAAAAAATAGTTGCATACTTGAAAACCATGTCT
TTTGTATGCGAGATTTGTTTTGACACCCGGAATTTGCCGCCCAATATTGA
ACTAGTATGAGTGTAAGGGGCCGCCGATTCCGTTTATTCGTGTGAAGTTC
TAACCATGTGactaattttttacttttaacattttcagggaatttggaaa
atcttttgattttgtcAACAAAGATGTGGACGAAGCTTTACGGCAATTCC
AGTCTTATTTCAAATTAACCGTGAGTGTTTGCAATGGtttgttttgcata
tttttcatTATCCTTTTCAGGAGCGTAGTGAGTCGACCAAATTGGGGTAA
TATGGGGAGGCAATTTTAGTAGGTGTTATTAACGTCCCCTatcaatgaaa
ataattttcgtcGTTAACGGTTATCCAAATGATAGCGGGCGGACTATACA
TTGGCCCAGATAACTATTACCATGTTAGGGGGTTGGGTGCCCTACCTTGA
TACAAGAGTGCGGAAAAGTATGCCAGACTTTTCATCTAAGgttgtgatga
cgtcactcacACGAATCAGCACTCGCGAGAGCAATTGTTGACAACGTGTA
TTTATCCCGGGATGGGGTCATCCTTCTTTTCttctattgttttaaaaaat
tccatagAGCTTGTTTTTCTCGGTTTCTAAAATTGTTTCCTTATTCACTT
TCAGGGAGAAGCACAAACTGTTGAAAAGTTCTTGCAGGTTTGTTCATTAT
ATTGAGTGCTAGTTGATTGCTTATCTAACAAACGTCCCCGTTGAAGTGGT
GGATGTAACGTGTTTGAATACTATGCATCAAATAAATTGCTCGCCCGTGC
TCACATCAACCAATATGTAGTGGTACCCACTTTGCGGGATAACTCACTTT
GCATGAATTTCGACGAAAAAGATATACCGATAGAGCTTTTTATAAATTAG
TCTTCaaatgtttataaataaaatcaacttaTATAATGAGATCGTCGCAG
ATCAAATGTCATAtggtaatattttgaaaacaaggtATAGCTGGtacata
atttatgaaaaggtctatcagtGGTTTAGCATCAATTAACTTTTTCGTGG
ACAGGTATTTTCAGATCGTTACGTGGAGTGCAATCCAGGTCGCGTATCCG
ACAATCCGGACACTATCCTCCTACTGGCGTTCGCATTGGCCATGCTGAAC
ACGGATTTGCACAATCAGAACGTCAAAAGACGGATGAGCCCTGAAGACTT
CATGAAGAACTTAAGAGGAACAGATAACGGAAACGACCTGGATCAAGAAA
TGTTGAGGAATATGTACATTCGTATTCAAAAGGTATTGTTCTGGTTTTTG
AACCAGTGAAAATTAGATGGTATTACTAATTATATGTCCAAATTGCTGGT
CCATGGGAAAGAAACTCCATATAATTCAAACTCACTGAAAGGATTTTATC
TGTTACCTGACAGACTTAGGGCGATGGTTAATCAACACATTGAACGTGTT
AACTGCTGGTAATAGAAAATCCTTCCAATCACtccaccgtcctcaaaagt
gcaaatacataaactcactaatTTATACTGCGAACacgaatttttaattt
tcttcttgttttgCTTTGTTCAGAATGAATTCGCAACGGGTGCTGACCAC
ACAACGCAACTTCATCAAATCGAGAACAGTTTCATTGGAAAGACACCTGT
AAGTCAAGTCTTGGTTTGAAACACTAAACTATTTCTCGGTTAATCTTGCA
GTGTTTCCACAATGATGAATTTAATATTTTAAAGTCCGGACACGGCAAAG
CCCTTCGAACAACTACAACTGCGTAAATTGAACTAAATAATCGAAGGAGA
GATCAAGGGAACTGGGGAAACTCTAGTttgggaggggggggggtctgaCC
TTTCAACAATTAACCATGTAATCCTTGTATCTTATTAACATAACATTTTG
TCAATGCAATGCAAAGGTTTGTACAAATGACATTCATTCTTTCCTATAGA
GTCTAGCAGTACCACATCGGCAGTTCGTCAAATTGTACACTGTGGAAGAA
GTGCACGAGACCAACCGTAAAGACAAACAACTTCATAACAGACTGGCATT
CTTGTTCAATGATCTACTCATTGTAAGAAATTAGCATCAATATTCTTTTT
ACACCACCAAAGCCTGGGTAAAGAGATTTTCTTGGAGTAAAAGTACaacc
tttaaaaaaactttttttgaagacATTGATTGTTTTATACTTGATTGAAA
CGGGGAAGATTTACTTATTCCTCATTAAATTCCCTTTTTCAATACCTGTT
TTATCTGTTCCTTAAGACTTCCGATTCATTAGATTCGGGTTATTCCCAAT
TCCCATGTAATCTTAAGTATTTGAACATGATTTTTCTTACAGCTTGCCAA
ACCACGTGGTAAAGGAGGTAGCCATGGAGCAGGTCACATGTTCACGTGTA
AAGCTTCTTATCCTCTACTTGGTAAAAAAGTTGCAGAGTTCAGCAACGAA
CGTAAGTAGTCCCCCTTTATCTAATCTAACCTCCAGTNCTACTTGGTAAA
AAGGTTGCAGAGTTCAGCAACGAACGTAAGTAGTCCCCCTTTATCTAATC
TAACCTCCAGTGTCCAAATCCGTATTTTGTAATGCCTAATTATTACATTA
ACCATCGACTTATCCTTTATTTCAAGCTGTTCAACAGTTACTTTTGACTT
ATTGAGAAGAGATCGCAATACACCTTAGCACTGTCGGCTTTTTAGGAGAC
TCGTAATGAATTTGCAttacaaagaaaattagttctcgaCACACGCCATT
TTCGATTGACTCTAAGAAACCAAGCAAATTCCCGCAAAAACATGCCATAC
GAAAGAGACATTTCCCTGGACCTCTAGGGTCTCCACTTATCTCCACTGca
tgtagtctagcaagctagacgactaatttatacatagtaaaaataaagca
aaaagtaatgaatggaacaattttagtcgtctagaaacctttgtgcactt
aCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcatttgagttgatttcgt
tttgagagtttgttgttgcttgataaattgttttctcgctacgcaagttt
ctgcgtagctagcccctgtatctataaggcagGAACACCGGATtattcca
gtcgtttatacaaactaaatcccgtattactattattattattattggta
ttattagtattacacgcattataaacgactccagtctacactGCATGCTA
TTTTCAGCATTCGAATAGTTCAACTAAATTGATATTCCTTTTATCACTTT
AATGCAAAGGGGATCTTACACTTTTCCAAAGAGCGCTCCTACACTTATGT
TTTCGATACTGTTGCCCAAAAGAACTTCCTTTTACCAGTCTCCTAAAAGG
CTGACAGCGCTGCTAAAGATTGATAGGTGTGTTCAAAAGAGACACCAGGC
AAAGAGGCTTTCAGCAAATTTTATATATTCAAGGTTGCCTTTTTAAAGCT
TCTAAGTCTCTTTAAAGAGTACATAGTCGTAAGTGGCAAAAAGTCGAGAT
AAGGCCTTATTTCGACTTTGAAAGTATAACCCACACACATTATCCATGAT
TCCACAGCTTTAACATAACCAAGAAATTATACATTCTTTTTTTCCTCCTT
CAGATTATTCACTGGGTGTACTTCTTGTGGGGCGGTTTGATAACAAAGTG
GTTGCCACTTTCAACATGAAAGATGAAAAGACGAGGCGTTCTTTCGTCGA
CGAACTGGATGAATATATAAGAGAGGTAGTTCTTTCTCACAAAAAGTCTA
ATGTCTACAGAAACTAGCTGAGAATTTGAGTGTTGTCTTGCCTTTTAAAT
TTAATCTACTCTTGATAGATTGGAATGTATATATTTGAAGAAATTCCAGG
AAATTCTAAAGAGTACACCAAACCAATTCATTAATCTACatcatttcaat
tttgtttcGTTTTAGACCACTGGTATGGAAAACATTCGTTTAGGTACGTG
AAAAGCTCTTCTTAAGCATCTTTTCTTGATCCAAAACATctgaaaaggca
ttaaaaattatACATCAAATTATTTAGGTCTTGAAGAGGCAGTTTTTTTT
ACAAACTCGTGATATTTGTAACACCTTAAACATTTGAGACAATACAACAA
GTTGTAAACTCAAGTGTTTTAAGATGAACAGCCACGTGCCGTTGATTCAT
GTTACCATGTCCTAAATCATTGGTCCTTTTTATCATTCGACAGCACTTAG
CAAAGTGAATCAATTAACGTGGCACAATCGAAGGAAGGACGACGGCCGCA
CCAAATCTCTTCTCTTACAAGACTCATCGTCATCATCCAAAATGGAGGCC
GGTGGAGCGGAGACGACCAGTCTAACAGACCTTCGCATCGGTTCCAACCA
TTCCAACGAAGGGGAGAGTAATCAAAATAAGATCATGACGTCAGCTTCCA
TGGGAGATATCAATGAAGTTGAATCAGGTTGGTATTTCTGAAAGCCTAGT
CTACCCTCTTTTGAATTACGTCTCGTGCAAACTTAGAAGTATACTTCATC
AGCAAatgcttttcaatttttttaaaaagtcgTATACATACCGCCACGTA
GCTCCTTCTTGGGAGGGGTTATTACagcggagtctccataactcgaacat
gcaCGGGAATTGAAAATTGTCGGAGTTATGGGAatttcgaattaaggaga
ctgatttataaggcattgtatACTGAAGGGACAAATAAACTtattcgaat
taaggagacattcgaataAAAAAGGTTCGAGCTctggagactcaactgta
tttATGTTTGTAGTTATTGTTTATATATCACGAAAGGGAAAATAATGACA
CCTTGTTGTGTCTAATGGACTATCTGAATATTAAAATATGGATATCTTCT
CTCTTTACTGTAGATTCTGAAGACTTTGAAGGAATGCAAAGAACAAACAG
CGCCAATTCACTTGGACCTCCCAGGAACACTGTAAGTATCGCTTGAAATG
ATTAGGTTCGTCATTGCACTTTGCATGCTAATGCACAATGAAAGAATATA
AATACAGAACATGATTTATTGTTGAAATCTTTTTACAGATATATGTATGA
TAAAAGAACACACTTTTGGAGCACCATTTGCATTTGCACAAAATTTGCAC
AATATTAGCATGTATAAAACACATTGTCGCATTTGCAATACCTTTTTCTA
GCCACAGTCGCCTACAAAACCTTCGAAAACTGGATTTCTTTACACCATTA
AAGAAGTGGTCCATTCGCCGAGTTTGCGCCGAAAACACTCGTCCTTTTTA
CGAAACGATCGGTCGGCACCGAAAGAACACCGACGTAGCATGCCTGTGAT
CTCTTCAAAAACGAGTAAGGCGTTGTTTGGATGCATGGTTTTTAGAATAT
AACCAACATGCTAACAAACAATGCTAACAAACAATCCTTCTTTACTTATG
AACATGACtgacaaaaaagttttatgttACTCGTGACGTAATATTTTATG
CGCGGACTTCTCTTTACGCCTCTCTGGAAAAACAGGCGCTACAGGCAATT
GTACAGTCTAAAAAAGAATTTAACTTTAAATTAAACACAGCTATCACTGT
GTCTCACTCACTAACATTCTGCTGATTGGTAGTGCGAAGGTTCAATCACA
GGCCTGCACCGCANAACATTCTGctgattggtagtgtgaaggttcaATCA
CAGGCCTGCACCGCAGTGGaatgtgttcgaatcccaagaaCTAGGGAAAT
ATGGAGATCTCTACCTTTACTCCGAATTTAACTCATTTTGTTCTTTAGCC
ATTTTTCTAACTTACGACACGGAAACTAATAGACCTTTACAAATAATGAT
TGCGACATGAGTACCATGAGTTGAAGTGTGCACTAATGtaaaatgataca
aaatatATAAGATCACAATACGCAACTAAAGAAGTTCAAATCCTCAAATG
GGCTCAACTAATTCAAATCTTTGCATGGTGAACTAATAACTCGGTTCAAA
CTAATTTATCTAACATTTTTTTACCTGAGAAAGTGACAGGGAGGGGCATC
ATCTTGATTTTTTAATCCTGAAAGCTGACTCCTAATACAATTGCACCCCT
TAAAAGTCCCCTAAAAGCTGGGTTAGTGTTTGCAGTTTGATATCTAGAAA
TTTTTTCTATGGATCTAACCTGTCATTAACTTTCGTAATTGTCAAAACGT
TTTCTTTTCTGAAAGCTTCATTATGAAATTATCTTCAGagatgtttttgt
ttcttcatCGAGACTTTTCTTTGATATAGTTTAGTGTTTTCAAAGCGTGA
CTTACAAAGCCTGATTCTCTCTTTTCTTCTTCATAGAATTTTAGCACCAC
TAAAGGCTCGTCTCAAACAACGGGCAATGGTCACTCAATGTCGCGTACCA
CATCCGTCAAAACTTTATTCGGCCATTGGGCGCCCAAATTCCGTAAATCG
ATGACGTATAATGACAGTAGACGCCGAGGTTCGTCTTCTGTCAACGAAAC
TGACACGCCACTTATAGGGCGCGACCGTCGCCATCATTCACACTTACAAG
CTCGAGATATCTCGCCCTCTCCGCCCGTTAAAAGGAACCGAACACCCTCG
GTGTTATCTGAAGGATCGAATGCCGAAAAACGTAAAAGTGCTTTTCTATG
ATGAATTGGTCGATCCGTGCAAGTATCGAGTAAATCGGGTGATGAAGATC
TCCAAAAGTGTGGGGCTTTGAATCTTTCCTGAAACGGTCCATGAATTCAA
CACCTTCGCAACTTCCGAGATAAATTTCTTGATGATTTGACTGGTGTTTG
ATTTCAAGAATCCTTTTGTTGAACGGGGTAATAAACTCGCAATGAACTTT
CAATAATAGACAGTAATTAAAATGCAACAGGAAGAACCGGATTCACAAGA
GGGCGAGTATAAATCACTACACCTTACTACACACAACAATTGCATatttt
aattgaaggtagaAAGTATCTTTTCACAATGTTTGATTTTGGAAACTCTG
TTGGGATGGACTATGATCACACGGATTGGTCGGGAAACATCCGAACCTTC
AGCCtgatattttcaatgaaatttggtcaaatttgttttGAGCAAATGCA
ACTGTTGTGCAATTAGACACAAAACGTTTTATAAAGTAAAATACTGCAAA
AAATGGAATTTCGTAATGATAAAAATGATGTTTTATAGATGAAGGTTTTA
GTTTGATTCACGTGTAAATAACAGTAGAAGCAATGTAGcaataaatcaaa
gaaaattacAAGACGACACAGCACTGGCTAAGGAGGCTTTCAAAAATGCT
TTAGTTATCATTACTAAGTTAGAAATTAAAGTTGTTTTATAATATGGATT
TAGAccaagatttttttcataataatttCAACTTCTCCTTCTTTCAGAAC
ACCTTTGCATATGAAAATGATAAGAATTTCGTGATCTGGCAAGTACTCGA
ATCTCCTCCTATCCCATTTTAAAACCGATAATGTACTCATTTTTATATCA
AACGTCGAGGTTCGAAATCTTGGTTTAGCCAATGTATtgtttagcttttt
gttcaattttcttttgttacaaacaaaaaacaagttgatcacgttaccaa
aatctccttttgggattggtctattttctaatcacatgatcaaaaagttt
gcaaaatagatcgattttggtacgtaagctcatcttttaacaataaaaag
agacaaaaaagccttccagaccagtgatTATGGTTTAGCAAATGCATTAA
GGCAAATCCGAATTGTAGTACAGAATATTTTGAGACATCCTGTGAGGAAT
AAATTCTACCATCCAGTCCTTCTTTTTACACACCTTTAGTTTTTTTTACA
ATAAGATTTACTTTAGTAGAATGTTTGATACGGTTTAACTGATTTGATTT
GAAGTaagattattttattattttttgttacaaTTATACTTTTTTAGCAT
TATAAAAGGAAaataattatcaattttttcgTAAACAATAGCAATATGCG
ACGTTTTTTAAGAGGATAAATTATTGCGAATGATGATAAAGTACAATCCA
TTGATATAAAGACACAATCAAACTGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042190XLOC_042190Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067560-exon-scaffold_471-1491911889:201172..201199TCONS_00067560-exon-scaffold_471-1491911889:201172..201199Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:201172..201199TCONS_00067560-exon-scaffold_471-1510915933:201172..201199Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:201172..201199TCONS_00067560-exon-scaffold_471-1575043694:201172..201199Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:201460..201541TCONS_00067560-exon-scaffold_471-1491911889:201460..201541Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:201460..201541TCONS_00067560-exon-scaffold_471-1510915933:201460..201541Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:201460..201541TCONS_00067560-exon-scaffold_471-1575043694:201460..201541Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:201976..202008TCONS_00067560-exon-scaffold_471-1491911889:201976..202008Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:201976..202008TCONS_00067560-exon-scaffold_471-1510915933:201976..202008Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:201976..202008TCONS_00067560-exon-scaffold_471-1575043694:201976..202008Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:202376..202603TCONS_00067560-exon-scaffold_471-1491911889:202376..202603Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:202376..202603TCONS_00067560-exon-scaffold_471-1510915933:202376..202603Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:202376..202603TCONS_00067560-exon-scaffold_471-1575043694:202376..202603Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:202895..202969TCONS_00067560-exon-scaffold_471-1491911889:202895..202969Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:202895..202969TCONS_00067560-exon-scaffold_471-1510915933:202895..202969Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:202895..202969TCONS_00067560-exon-scaffold_471-1575043694:202895..202969Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:203271..203393TCONS_00067560-exon-scaffold_471-1491911889:203271..203393Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:203271..203393TCONS_00067560-exon-scaffold_471-1510915933:203271..203393Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:203271..203393TCONS_00067560-exon-scaffold_471-1575043694:203271..203393Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:203664..203750TCONS_00067560-exon-scaffold_471-1491911889:203664..203750Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:203664..203750TCONS_00067560-exon-scaffold_471-1510915933:203664..203750Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:203664..203750TCONS_00067560-exon-scaffold_471-1575043694:203664..203750Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:203825..203846TCONS_00067560-exon-scaffold_471-1491911889:203825..203846Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:203825..203846TCONS_00067560-exon-scaffold_471-1510915933:203825..203846Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:203825..203846TCONS_00067560-exon-scaffold_471-1575043694:203825..203846Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:205125..205246TCONS_00067560-exon-scaffold_471-1491911889:205125..205246Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:205125..205246TCONS_00067560-exon-scaffold_471-1510915933:205125..205246Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:205125..205246TCONS_00067560-exon-scaffold_471-1575043694:205125..205246Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:205437..205464TCONS_00067560-exon-scaffold_471-1491911889:205437..205464Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:205437..205464TCONS_00067560-exon-scaffold_471-1510915933:205437..205464Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:205437..205464TCONS_00067560-exon-scaffold_471-1575043694:205437..205464Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:205715..205948TCONS_00067560-exon-scaffold_471-1491911889:205715..205948Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:205715..205948TCONS_00067560-exon-scaffold_471-1510915933:205715..205948Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:205715..205948TCONS_00067560-exon-scaffold_471-1575043694:205715..205948Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:206385..206452TCONS_00067560-exon-scaffold_471-1491911889:206385..206452Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:206385..206452TCONS_00067560-exon-scaffold_471-1510915933:206385..206452Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:206385..206452TCONS_00067560-exon-scaffold_471-1575043694:206385..206452Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1491911889:207808..209550TCONS_00067560-exon-scaffold_471-1491911889:207808..209550Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1510915933:207808..209550TCONS_00067560-exon-scaffold_471-1510915933:207808..209550Clytia hemisphaericaexon
TCONS_00067560-exon-scaffold_471-1575043694:207808..209550TCONS_00067560-exon-scaffold_471-1575043694:207808..209550Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_471supercontigscaffold_471:201172..209550 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.244635	0.683248	0	0.480115	0	0	0	0	0	0	0	0	0	2.49079e-06	0	0	0	0	2.38231e-10	0	0	0	0.784986	0	0	0	0	5.46798e-09	0.00888733	0
Blast
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BLAST of TCONS_00067560 vs. Swiss-Prot (Human)
Match: IQEC1 (IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens GN=IQSEC1 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.294e-57
Identity = 119/292 (40.75%), Postives = 172/292 (58.90%), Query Frame = 3 
Query:    6 EFNSQVLEEFGKSFDFVNKDVDEALRQFQSYFKLTGEAQTVEKFLQVFSDRYVECNPGRVSD--NPDTILLLAFALAMLNTDLHNQNVK--RRMSPEDFMKNLRGTDNGNDLDQEMLRNMYIRIQKNEFATGADHTTQLHQIENSFIGKTP----------SLAVPHRQFVKLYTVEEVHETNRKDK-QLHNRLAFLFNDLLILAKPRGKGGSHGAGHMFTCKASYPLLGKKVAEFSNEHYSLGVLL---VGRFDNKVVATFNMKDEKTRRSFVDELDEYIRETTGMENIRL 827
            +FN  VL+      DF   ++DEALR+FQ++ ++ GEAQ VE+ ++ FS RY  CNPG V    NPDTI +LAFA+ +LNTD+++ NVK  R+M  EDF+KNLRG D+G D+ +EML  +Y RI+K E  T  DH +Q+ ++E   +GK P           L++PHR+ V    + EV + N+  K  LH R  FLFNDLL++ K   K  +      ++ + S+ L G +V  F N++Y  G+ L   V   D KV+  FN  + + R+ F D+L E I E   ME  R+
Sbjct:  584 QFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLMGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHPGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKN---SVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRI 872
The following BLAST results are available for this feature:
BLAST of TCONS_00067560 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IQEC12.294e-5740.75IQ motif and SEC7 domain-containing protein 1 OS=H... [more]
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