TCONS_00067503 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067503
Unique NameTCONS_00067503
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4556

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067503 ID=TCONS_00067503|Name=TCONS_00067503|organism=Clytia hemisphaerica|type=transcript|length=4556bp
ATTTCATACGTCTGAGAATTTAAAGTGAATATTTTCACATGGGCACATAA
ACACATTCAGAGAATGGACTTAATCTTCCTAACGagaatcaaaaagtttt
gaaacattttttttttgttctcgTCCAATTGACATAAATCTGCGTGTGAT
GGTTTCTTTCTGAAAAATTCTGTGGTCAATTTTGTTTTATTCAGTTTTGT
TGTTGTTAATTATTGAGCTGTAATGAGTAGAAGACGTATTATTTCAGCAG
TGTGTTAGTAAGAGCTCTTCTTTGTTTATGTGGTGCACTGagcagagaaa
atttttggaattggATATTGTGTTTCTTGATGAAATCGTTACATTATCTT
ACGAGTGATATGAAAAACGTTGCTGCAGGAAGTCACCACGgcaacaaaaa
gaaattaactTTTTACGCATTGCGCGAGAAGCGCTCATTCGATTTATCCA
GTACTTTTCTACCGTTGACTGAATGCTACGTCGATGTCTATTGTCGGTAC
ACGTGCCATGCGAAATGTGTGACTTTGGTTGATCTCGAATGTCCCAAAAA
ACCTACCACAGAAAAGTCAAGAGAAGAACTCACCAAAGAAACTCTGGAAA
TACTCAACGATGTAACGGATGGTGCAGCCACACTAAAGCGTAAAAACAAC
AACTTGCCAAATTATGTGTCCTCCATATCTCAATTGAGCAAATTAATCAA
GGAATATAATAAAGAATCATCATTAATAATGACCCTGCACGAAGATTATA
CATTCGATGGCTTCATACGAGTGCACATGAACTTGAGCAGACCTGTCAAC
GTATCTTCAGATGTCAGCAATTTAACCCTCAAAAAGGCTGTCGCAAAGAA
CAAATCCATGAACCGGAAATCGATATCAGACGTCTTCAACATCGACACCA
ACATCAAACGAAGGACGTCCACTAGTGATGATTCAGGGATTGGTTCCCAG
TCTTCCACTGCTTCGTCTACCATCTTCGCAAACGACCCTGCAACTCTCAT
CCCTACGGGCTCAAGGAAAGGAAGGAGACCGTCTCGCCGTTTAAGTTTCT
ACATGCCGAAAGGAACTTATAAACCGTTACACGTCACAAGCAAAACAACA
GCCCGTGAGGTGATCGAAGCACTTTTAGCAAAATACAACGTTACGGATAA
TCCCAAGAAGTTCGCTCTCTATGAGAAACGGACCAATGAAGCACCTGGAA
GTCGTGAGAAAGAAGTGATGTACCGACGTATACCCGACGAAGAGAATCCT
TTGGTGTTATGTTTATCATGGGGTGCTTCAAAAGATGGATCGCCAACTTT
TGCTCTTAAAGAAAACGAAGATGGGAAAGTACAGTGGGAGTACTTCGAAC
TTCCAGAGTTAAACAATTTCCTGAAGATTCTTCAACTGGAAGAAGACGAA
CTCATTGCAGGgGTCATGCAAAAGTATGAGAATTATCGTGAAGAGTTGTG
CAAAGCTTTAGAATCTAAATCGCCAGAGTCAACGGGGACTTGATAGAGAA
ATTCTCTTTTTCAAATTGAGGTTAGGTGGAGATGAAAGGAGTTTCTTTGA
GTTGGTCATTCAAAATGTGAAAGAGAAGATTGATAAAGAGATATTCCAGT
AGAAATGAAGAGAGGGTTATGACGGCATCCCATCTGCTTCTGTGAGTCGG
TCAACCTTTTTCATAGAACATGACTGAATAATGGAAACCGTCAACTAATT
GAATCAAACCACGGCATAACAACATTTTTATTGAATAGGAGAGCTGAAGT
TTGGTTTTGAAAACCGAAAATGTTTCGTtctgttattttttaaatatttt
tggtgacGAATATTCCCTTGTCTTGTCTTATTTGAAACCCCGAAACAATC
CTAACTCCTAAGAGATGTTCATCTTTTggagaaaaataaaacttttaaag
gtACTGTCTGAGGCTAAGAAAttaattaaaagattttataCCGTATTTCA
ATTCCAAgataatgaaaattgaaaagattCGAAAAGTTTTCTAGACGGAT
TATTTTTCATCCCAAAACTTCAAATTACAAGAGAGGGATATAGTAGACTA
GGAATGGGAATAGAAAACCTCGGTTATATACTACACATACAATTTCTATA
CAGTAATAATTTATTCTTATcttttattagcaattgttttTGATGTAGAC
GAAGGTGGATTATTTTTCATATGATATTTTTTGATAAGATTCACATTTTT
TTTGCGTTGttatttaaaaggaaaatttccCCTTCTAAATATTAAACTGA
TACAACAAATATAAGGAGAACGACATTTTGTAAATTAAGGAGCTGTAAAT
ATTCTAGTTTTCTGAAAAACAATTTTAACAAGAAATATATAGATACTATT
TTATCTAAAGATTTACATATAATACGTGCTTAAAAAATTGTCCTTGAGTA
AGCCTATGTAGAAGTTTGAGACCTATTTTTAATCCATGATAAACTTCGCA
TATGTCTAAACTTTTTGGGGAAACATTTTCGTTGTATTTCCTGTCGAAAT
GACTTGGACCTCCATATGTAAACCAAAGGAGCCAACGCACTAGATGAAAA
ACTTATCATTTTGATGGTAAACCTTGCGATCATCAAGTGTTTTTCATCAC
TTCTAGTCAAATAATTTCTTGTCATATTATCAACTAAGTAGAATATGGCC
ATAGGTCCCCAACAAAGCAGGTAGGTGAACATGAAGGCCAACGACAGTCT
TGTTGCTTTCAACTCCATCGCGAATTGAAATGCACTTGTTTTTGAAGCAG
TTTTGGTAAGTTGTTTTCGTCTATATACCAGTGATGTCATCTCATATGAA
TTGTTTGATTCATTCGAATTCGAATCGTGAAAATACTTATCAACCGATCT
GATTTTTTCTCGATCTAATTGATTCTCAGTGAAACTATTGACACTGTCCC
TTAAGCGCCTGTCATGTAACCCTTTACGGAAAGCTATCTTCCATATGACA
TAGTAATTACACACAAGTATAAAGAATGGAATGGTGTTGAAGATAGTAAT
CACTGTCAAACTCCATACATATGTCGGTACATATCCACATCGCTCGTTCG
TTTCAGCTTTCATATAAAATGGCATGATGTCGATGATTGCGACAAAGATC
CAAACAGACAACAAGATGACCAACATATTTCGACGATTGATGACTTTATT
ATACGTCATGGGACGTTTGATGGAATACAAACGATCGAAACTGACCACTA
GTAGATTCAACTTCATCGCATGTCCACTGTAGAAGTAAGCGAACCGATAT
GTTGCGCAAACCCACAGATGATCATCCACAAATTTGGTGTGTAGGTATCG
ATACAGATATAATGGCATCGCAAATAAATCTTGAATGGCTGCTGCAAACA
TAAAGCTAATGATCGGGTAGTTTGGTAATATTCGCAGTTTTTCACTTGAC
AACAACATGGTGATGGTAAACAGATCAAAAGTTACCATGACAATACATAT
CGGAACAATAATACCCAAACTCACTTCTTCACTATGGAAACCAAACAGGG
AATCGCTTGTCACGTTTGAGTTTTCGATCATTCTTTTGTAACTCAAGATA
GCAATCGACCACCCTGGATATAAGTATCGAATTatgttgatttttcaagt
ttttcttttcacaCACCTCTTTTCTCTATTTCACGATGTTGTATACTGGT
CCTTCACACAGCTTTTATATAATGAACACGTAAAGCAATAgtgaagattt
ttttcattaaagtTTTATCAGCTTTTTGCATCTGCTTTAAAAGTTCGTCC
AAtcatttctttctttcattttatgatCTTTTTGCTGGCCTTGGAATAAC
AAAATATAACtttaatgaaaaacaaagaaatgtacgATCGACATTTTGAT
GATAAGAGTATACCCTCAACCTCAAATATAAACTTTGATTTTTATTGGCT
CATCCAAAGCTTAGCACCCTCTACAACTAAACTAGGATTAGGATTTATTT
CTGTAAATCATATCTAGACAGTATTTTTATATCttatcaaaaaaggaaaa
agttaGTCGCCATTTTATACTGAAATGTAAAGTGCAAGCCCCCTTCCTCC
ATCAGATAAGGAGGCCTGGTGGGTGGCGAGGGAATTGCgttagagtgcaa
ggtaccttcTCATACTCCAGTGTCATATCATGGTTTCCCTAACAAAAACT
CATCCTTTATTTGGCCTGGTGGAATAAGCCCCCTTGGTACAAATTGCATT
TATGATGCGATNAAGTGCAAGCCCCCTTCCTCCATCAGATAAGGAGGCCT
GGTGGGTGGCGAGGGAATTGCgttagagtgcaaggtaccttcTCATACTC
CAGTCTCATATCATGGTTTCCCTAACAAAAACTCATCCTTTATTTGGCCT
GGTGGAATAAGCCCCCCTTGGTACAAATTGCATTTATGATGCGATTTGAA
ATTCGATCGGCACTGTGCACAAGAAAACTTCCAAActgaagaaagaaaat
ctaaaagatTTCCTTCTTCCTTGTTTAAAGTCAAATAAGAACACGAGATG
AGTTATCAAAATCAACATAAATCTGTAAAAAAGAGCAAACACTTCAACCA
ttcttg
Run BLAST on NCBI

transcript from alignment at scaffold_47:404308..412524-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067503 ID=TCONS_00067503|Name=TCONS_00067503|organism=Clytia hemisphaerica|type=transcript|length=8217bp|location=Sequence derived from alignment at scaffold_47:404308..412524- (Clytia hemisphaerica)
ATTTCATACGTCTGAGAATTTAAAGTGAATATTTTCACATGGGCACATAA
ACACATTCAGAGAATGGACTTAATCTTCCTAACGAGAATCAAAAAGTTTT
GAAACATTTTTTTTTTGTTCTCGTCCAATTGACATAAATCTGCGTGTGAT
GGTTTCTTTCTGAAAAATTCTGTGGTCAATTTTGTTTTATTCAGTTTTGT
TGTTGTTAATTATTGAGCTGTAATGAGTAGAAGACGTATTATTTCAGCAG
TGTGTTAGTAAGAGCTCTTCTTTGTTTATGTGGTGCACTGAGCAGAGAAA
ATTTTTGGAATTGGATATTGTGTTTCTTGATGAAATCGTTACATTATCTT
ACGAGTGATATGAAAAACGTTGCTGCAGGAAGTCACCACGGCAACAAAAA
GAAATTAACTTTTTACGCATTGCGCGAGAAGCGCTCATTCGATTTATCCA
GTACTTTTCTACCGTTGACTGAATGCTACGTCGATGTCTGTAAGTTCCAA
AAGCTAATTTTCATGCCGGTTAAAAATCTCAAGGTCGACTTATGAAAGGA
GGAGTCTAACTAATTCCGTAAATTTAGCCGTCTTCATTATTCACATGCAT
GGATGTTATATGAAGTATGATGTCATTTTCAAATACAGCTCAAAAAAAGA
TGTTGATTCGGTCTATTGAAAGATTTTGAATTCGAATTTCACCGCCGAAA
GTTTTAGCAGCTTTCAAAAGACGCGAAAATTGAATAATTTTGCTTCCCCA
AGAGTAAGTTGAATTTGTAAAATCTAAAATTAGCACGTTCTTTTGGATCA
GAAAATTTAAAACTTTAAAACTCGACGTACCTTTATATCTTTAGATTGTC
GGTACACGTGCCATGCGAAATGTGTGACTTTGGTTGATCTCGAATGTCCC
AAAAAACCTACCACAGAAAAGTCAAGAGAAGAACTCACCAAAGAAACTCT
GGAAATACTCGTGAGAACTTTATTTTCATTTTCATCTCTTCTTTCGTTTA
TTAAAAGATTCTTCTAGAAAGTTCTTAACAAGTCTCAATTTCGTTCACAG
TTTTCAAGGAAGGAAGGATGTTTAGTTACCTGTAGTTCTGCTCACGAGGA
AACTCTTTTGCTAGTGAGATCATGGTTGTACTTCTCCCCCTCCCCCTTTT
TCATCTATTAATTCTTAATGTGAAAAAATCATTCATCGTTTCTGTAAATC
AAATACGCTGGGATTCTTCACAGAAAGAACATGAATCTTTTACAAGCGGG
ACCATTTTCTTCGTATTTTGTTTGATTGATAGATTGATGCATTCATATAC
TGTATATCATGCTCTTCTGAATCAAGTTTCTGGCTGCTCTGTTATCTTTT
TCTCTCTTTATTTGTATAGGATGCATATTTTTTCTCTCAAGTTTTGAACT
GAAGTTTGTGAACACAATTTTTACTCAGTTTTTGAGAAAGCGTGTAGAAT
CAAATATTGCTACTGTTTGCGAGAGAAGGAAAATGTTATGAAATTATCAG
CTCGTTGAACACAATTCGGACCTATTTAAGAATCAAGTTATAACCATGCT
TAAATTTGCAACTAACTTAGCAAAGAAAAGCTCGCGAGATCTGACCTTGA
AACGTTCTCCAGAATTGACATTGAAAAGTTCGCCACCGGCAGATTTAACA
TTAAAAGGTTTGTCAGATCTAACTTTAAAGAGTTCTTCTTGTTTGAGAAG
TGATGCAGAAGCTTTTGCAGACCTATGCATGGAAGACGTGACCCCGACTT
CTACTCCAGAAGCAGAAATTATTGATCTAACAGATCCTAAAGCATGGCAA
GAAAGGGTAATTATATGCTTTATCATTTGTGAATTTTATTCAGTTTTCAG
CTTATTTATTACAGTTCGCTCTAGTTTTATAGGTTTTCCTATTCAAAGCA
ATTTAGTTCATTTCTTAAAAATTTTGATAGTTTAGTTTTGTATTTAAGGT
CTTTAAAGATAGTAGGTTTTCTCATTTTAGACAAAGATTTTTATTGGATG
AAATGTTTATTAGATCAAGTGATTGATATGTAGTCTTTCTTAGCCAGGGA
TTTTGGAGGATTTTTCGAGATTTTATAAAGAAACTCAATCAAAAAGACTT
TTTTTCCTTTTTGTANATCAAGTGATTGATATGTAGTCTTTCTTAGCCAG
GGATTTTGGAGGATTTTTCGAGATTTTATAAAGAAACTCAATCAAAAAGA
CTTTTTTTTCCTTTTTGTTAAACCAATATTGTGATCCTTCTGCGTTATCT
ACTATCAACTTCTTTTAGGGTATAATAACAGATGGGTTGTCCAAAAGTCT
GTGTCTGTCTGGATTTGGGATATTATTAAATTTCTTATTTTGATGTTTAT
AGAACGATGTAACGGATGGTGCAGCCACACTAAAGCGTAAAAACAACAAC
TTGCCAAATTATGTGTCCTCCATATCTCAATTGAGCAAATTAATCAAGGA
ATATAATAAAGAATCATCATTAATAATGACCCTGGTACGTTTATTTCCCA
TCAAAGCGCAATCAATTTCTTGATATTGGTCATGTACTTTGCCATTTAAT
ATATAATTTTCAATGTTTTTTATGCGTAATTTTGAAACAATTTGATAGTT
TCTATTTTGATATATGCAGTTTGAAAATAGACTCTCTTTGATTGGTCAAG
TGGGTTAATTAGCGTCTAAGCAACTAAACCTGTTATGGTTCCTGGCATGT
TGGGCACCCTGATCAAGCAGTTGTTTGAGGAAAGTTTTGATATGTTACTT
CAAACATGATGTAGTCATTGCGTTCAAAAGAAGTCTGAACTTGATAATCC
TTTTAATCTTTGATTGAAACTTTCCAACGTCTCTAAAGCTGCAACTCATT
CCATTTTTCTGATGAAACTCATATTTAGGTTGTACCAGAATTATCCCTCA
TGAAAGAAATCTTGCTTTTCTTCATTTTAGCACGAAGATTATACATTCGA
TGGCTTCATACGAGTGCACATGAACTTGAGCAGACCTGTCAACGTATCTT
CAGATGTCAGCAATTTAACCCTCAAAAAGGCTGTCGCAAAGAACAAATCC
ATGAACCGGAAATCGATATCAGACGTCTTCAACATCGACACCAACATCAA
ACGAAGGACGTCCACTAGTGATGATTCAGGGATTGGTTCCCAGTCTTCCA
CTGCTTCGTCTACCATCTTCGCAAACGACCCTGCAACTCTCATCCCTACG
GGCTCAAGGAAAGGAAGGGTAAATATTTGACTTTTAGAACCTTCACCTTC
CTCTACTCAATACAAGTTACTTACAAATCAATATGCTTTTCTCAAGTAAC
CTCGCATAACGAAATCATTTTTAAACTGTGGCAAGATTTTGAACACGCTG
TTGACGTCCTTATTCTCTTTACTTGTTCTTTTTTTACATATCAGAGACCG
TCTCGCCGTTTAAGTTTCTACATGCCGAAAGGAACTTATAAACCGTTACA
CGTCACAAGCAAAACAACAGCCCGTGAGGTAATTTCAGCTTTTTCACACA
TTTCCGCATTTTAATATTTCTTTCTTCCTCGTTGGTGACTTATTCTTGAT
ATGCGCAAGTCAAGATTACATCATTTTTTTCATATTGGAAACATCCGAAA
AAACAGGAATTTGACCCATGTGTTGCTAGTTTTGGTAACTCACTCACCAC
ATTCTGGTGTTGTTTCGGGTGTTTCCGATAGGGAAAATCACGTAATCTTG
CCTTATGCATATCAAGANACACGCTGTTGACGTCCTTATTCTCTTTACTT
GTTCTTTTTTTACATATCAGAGACCGTCTCGCCGTTTAAGTTTCTACATG
CCGAAAGGAACTTATAAACCGTTACACGTCACAAGCAAAACAACAGCCCG
TGAGGTAATTTCAGCTTTTTCACACATTTCCGCATTTTAATATTTCTTTC
TTCCTCGTTGGTGACTTATTCTTGATATGCGCAAGTCAAGATTACATCAT
TTTTTTCATATTGGAAACATCCGAAAAAACAGGAATTTGACCCATGTGTT
GCTAGTTTTGGTAACTCACTCACCACATTCTGGTGTTGTTTCGGGTGTTT
CCGATAGGGAAAATCACGTAATCTTGCCTTATGCATATCAAGAATTCTAA
AGTTTACAACAGCCCCTGTGTCACAGGCCTGGTGGACCCCCCCCCCACCA
ACTGAAAAACTGAACTGAACTCTTTGCCACTTCGGCGATGATATTTAGAT
AGAGAATTACTGTTTTCAAAATTGAAGATGAAATAATCCGCTTTGACAAA
GTTTGACATTCATTTTTATTATTATAGGTGATCGAAGCACTTTTAGCAAA
ATACAACGTTACGGATAATCCCAAGAAGTTCGCTCTCTATGAGAAACGGA
CCAATGAAGCACCTGGAAGTCGTGAGAAAGAAGGTACTAAATTTTCAATG
GGTCGACTAATGGATAAAATCAAAATGATAATCAATACATAACATTATTA
AAGTCCACAACGATATCGTAGTGGCTTGAGTATAAAAAGGTCTCTCAAAC
TATTCATGATACAGATGTAGTTTTAGACGTCCCTTCATTCTTACCAAGTT
CAATTTAGATTTCTTTAACCATAATATAATCAATTTCTACTTCAGTGATG
TACCGACGTATACCCGACGAAGAGAATCCTTTGGTGTTATGTTTATCATG
GGGTGCTTCAAAAGATGGATCGCCAACTTTTGCTCTTAAAGAAAACGAAG
ATGGGAAAGTACAGGTACGTCACGTCATTTTTGATGAGTATGAGGCAGGG
TTTTGTTTATATCTTGCTCTGTTATTGTTGGTGTTTCTTTTTGGCTTTAT
TTACTTTTACTCTGTTTAATCAATTCTACGTCATTTTTGGTTTCAGTGGG
AGTACTTCGAACTTCCAGAGTTAAACAATTTCCTGAAGATTCTTCAACTG
GAAGAAGACGAACTCATTGCAGGGGTAAATAATTTTTGTTGTTCTTTATT
ATACTTTAGGCCTTTCATTCTACCTGTCACATACAATGTCTTTGATTATC
AAAAATATTTGAATCAAAATATTCATAGTTTTGGTTATTTTCAGGTCTTT
GACCATCCTTGTTCATTTTTCAGGTCATGCAAAAGTATGAGAATTATCGT
GAAGAGTTGTGCAAAGCTTTAGAATCTAAATCGCCAGAGTCAACGGGGAC
TTGATAGAGAAATTCTCTTTTTCAAATTGAGGTTAGGTGGAGATGAAAGG
AGTTTCTTTGAGTTGGTCATTCAAAATGTGAAAGAGAAGATTGATAAAGA
GATATTCCAGTAGAAATGAAGAGAGGGTTATGACGGCATCCCATCTGCTT
CTGTGAGTCGGTCAACCTTTTTCATAGAACATGACTGAATAATGGAAACC
GTCAACTAATTGAATCAAACCACGGCATAACAACATTTTTATTGAATAGG
AGAGCTGAAGTTTGGTTTTGAAAACCGAAAATGTTTCGTTCTGTTATTTT
TTAAATATTTTTGGTGACGAATATTCCCTTGTCTTGTCTTATTTGAAACC
CCGAAACAATCCTAACTCCTAAGAGATGTTCATCTTTTGGAGAAAAATAA
AACTTTTAAAGGTACTGTCTGAGGCTAAGAAATTAATTAAAAGATTTTAT
ACCGTATTTCAATTCCAAGATAATGAAAATTGAAAAGATTCGAAAAGTTT
TCTAGACGGATTATTTTTCATCCCAAAACTTCAAATTACAAGAGAGGGAT
ATAGTAGACTAGGAATGGGAATAGAAAACCTCGGTTATATACTACACATA
CAATTTCTATACAGTAATAATTTATTCTTATCTTTTATTAGCAATTGTTT
TTGATGTAGACGAAGGTGGATTATTTTTCATATGATATTTTTTGATAAGA
TTCACATTTTTTTTGCGTTGTTATTTAAAAGGAAAATTTCCCCTTCTAAA
TATTAAACTGATACAACAAATATAAGGAGAACGACATTTTGTAAATTAAG
GAGCTGTAAATATTCTAGTTTTCTGAAAAACAATTTTAACAAGAAATATA
TAGATACTATTTTATCTAAAGATTTACATATAATACGTGCTTAAAAAATT
GTCCTTGAGTAAGCCTATGTAGAAGTTTGAGACCTATTTTTAATCCATGA
TAAACTTCGCATATGTCTAAACTTTTTGGGGAAACATTTTCGTTGTATTT
CCTGTCGAAATGACTTGGACCTCCATATGTAAACCAAAGGAGCCAACGCA
CTAGATGAAAAACTTATCATTTTGATGGTAAACCTTGCGATCATCAAGTG
TTTTTCATCACTTCTAGTCAAATAATTTCTTGTCATATTATCAACTAAGT
AGAATATGGCCATAGGTCCCCAACAAAGCAGGTAGGTGAACATGAAGGCC
AACGACAGTCTTGTTGCTTTCAACTCCATCGCGAATTGAAATGCACTTGT
TTTTGAAGCAGTTTTGGTAAGTTGTTTTCGTCTATATACCAGTGATGTCA
TCTCATATGAATTGTTTGATTCATTCGAATTCGAATCGTGAAAATACTTA
TCAACCGATCTGATTTTTTCTCGATCTAATTGATTCTCAGTGAAACTATT
GACACTGTCCCTTAAGCGCCTGTCATGTAACCCTTTACGGAAAGCTATCT
TCCATATGACATAGTAATTACACACAAGTATAAAGAATGGAATGGTGTTG
AAGATAGTAATCACTGTCAAACTCCATACATATGTCGGTACATATCCACA
TCGCTCGTTCGTTTCAGCTTTCATATAAAATGGCATGATGTCGATGATTG
CGACAAAGATCCAAACAGACAACAAGATGACCAACATATTTCGACGATTG
ATGACTTTATTATACGTCATGGGACGTTTGATGGAATACAAACGATCGAA
ACTGACCACTAGTAGATTCAACTTCATCGCATGTCCACTGTAGAAGTAAG
CGAACCGATATGTTGCGCAAACCCACAGATGATCATCCACAAATTTGGTG
TGTAGGTATCGATACAGATATAATGGCATCGCAAATAAATCTTGAATGGC
TGCTGCAAACATAAAGCTAATGATCGGGTAGTTTGGTAATATTCGCAGTT
TTTCACTTGACAACAACATGGTGATGGTAAACAGATCAAAAGTTACCATG
ACAATACATATCGGAACAATAATACCCAAACTCACTTCTTCACTATGGAA
ACCAAACAGGGAATCGCTTGTCACGTTTGAGTTTTCGATCATTCTTTTGT
AACTCAAGATAGCAATCGACCACCCTGGATATAAGTATCGAATTATGTTG
ATTTTTCAAGTTTTTCTTTTCACACACCTCTTTTCTCTATTTCACGATGT
TGTATACTGGTCCTTCACACAGCTTTTATATAATGAACACGTAAAGCAAT
AGTGAAGATTTTTTTCATTAAAGTTTTATCAGCTTTTTGCATCTGCTTTA
AAAGTTCGTCCAATCATTTCTTTCTTTCATTTTATGATCTTTTTGCTGGC
CTTGGAATAACAAAATATAACTTTAATGAAAAACAAAGAAATGTACGATC
GACATTTTGATGATAAGAGTATACCCTCAACCTCAAATATAAACTTTGAT
TTTTATTGGCTCATCCAAAGCTTAGCACCCTCTACAACTAAACTAGGATT
AGGATTTATTTCTGTAAATCATATCTAGACAGTATTTTTATATCTTATCA
AAAAAGGAAAAAGTTAGTCGCCATTTTATACTGAAATGTAAAGTGCAAGC
CCCCTTCCTCCATCAGATAAGGAGGCCTGGTGGGTGGCGAGGGAATTGCG
TTAGAGTGCAAGGTACCTTCTCATACTCCAGTGTCATATCATGGTTTCCC
TAACAAAAACTCATCCTTTATTTGGCCTGGTGGAATAAGCCCCCTTGGTA
CAAATTGCATTTATGATGCGATNAAGTGCAAGCCCCCTTCCTCCATCAGA
TAAGGAGGCCTGGTGGGTGGCGAGGGAATTGCGTTAGAGTGCAAGGTACC
TTCTCATACTCCAGTCTCATATCATGGTTTCCCTAACAAAAACTCATCCT
TTATTTGGCCTGGTGGAATAAGCCCCCCTTGGTACAAATTGCATTTATGA
TGCGATTTGAAATTCGATCGGCACTGTGCACAAGAAAACTTCCAAACTGA
AGAAAGAAAATCTAAAAGATTTCCTTCTTCCTTGTTTAAAGTCAAATAAG
AACACGAGATGAGTTATCAAAATCAACATAAATCTGTAAAAAAGAGCAAA
CACTTCAACCATTCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042152XLOC_042152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067503-exon-scaffold_47-1575043694:412036..412524TCONS_00067503-exon-scaffold_47-1575043694:412036..412524Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1575043694:411565..411680TCONS_00067503-exon-scaffold_47-1575043694:411565..411680Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1575043694:410041..410172TCONS_00067503-exon-scaffold_47-1575043694:410041..410172Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1575043694:409307..409594TCONS_00067503-exon-scaffold_47-1575043694:409307..409594Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1575043694:408671..408754TCONS_00067503-exon-scaffold_47-1575043694:408671..408754Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1575043694:408142..408247TCONS_00067503-exon-scaffold_47-1575043694:408142..408247Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1575043694:407811..407929TCONS_00067503-exon-scaffold_47-1575043694:407811..407929Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1575043694:407601..407678TCONS_00067503-exon-scaffold_47-1575043694:407601..407678Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1575043694:404308..407451TCONS_00067503-exon-scaffold_47-1575043694:404308..407451Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1510915933:412036..412524TCONS_00067503-exon-scaffold_47-1510915933:412036..412524Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1510915933:411565..411680TCONS_00067503-exon-scaffold_47-1510915933:411565..411680Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1510915933:410041..410172TCONS_00067503-exon-scaffold_47-1510915933:410041..410172Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1510915933:409307..409594TCONS_00067503-exon-scaffold_47-1510915933:409307..409594Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1510915933:408671..408754TCONS_00067503-exon-scaffold_47-1510915933:408671..408754Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1510915933:408142..408247TCONS_00067503-exon-scaffold_47-1510915933:408142..408247Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1510915933:407811..407929TCONS_00067503-exon-scaffold_47-1510915933:407811..407929Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1510915933:407601..407678TCONS_00067503-exon-scaffold_47-1510915933:407601..407678Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1510915933:404308..407451TCONS_00067503-exon-scaffold_47-1510915933:404308..407451Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1491911889:412036..412524TCONS_00067503-exon-scaffold_47-1491911889:412036..412524Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1491911889:411565..411680TCONS_00067503-exon-scaffold_47-1491911889:411565..411680Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1491911889:410041..410172TCONS_00067503-exon-scaffold_47-1491911889:410041..410172Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1491911889:409307..409594TCONS_00067503-exon-scaffold_47-1491911889:409307..409594Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1491911889:408671..408754TCONS_00067503-exon-scaffold_47-1491911889:408671..408754Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1491911889:408142..408247TCONS_00067503-exon-scaffold_47-1491911889:408142..408247Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1491911889:407811..407929TCONS_00067503-exon-scaffold_47-1491911889:407811..407929Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1491911889:407601..407678TCONS_00067503-exon-scaffold_47-1491911889:407601..407678Clytia hemisphaericaexon
TCONS_00067503-exon-scaffold_47-1491911889:404308..407451TCONS_00067503-exon-scaffold_47-1491911889:404308..407451Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:404308..412524 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.283904	0.208344	1.12124	0.7919	0	0	0.674602	0.636921	4.13566	2.21084	0.536473	3.23749	0	0	0.45096	0	0.198754	0.407432	0	0	0.581131	0.401771	0.293022	0.275987	0	0	0	0	0.315589	0.279331
Blast
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BLAST of TCONS_00067503 vs. Swiss-Prot (Human)
Match: RASF1 (Ras association domain-containing protein 1 OS=Homo sapiens GN=RASSF1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 8.278e-38
Identity = 109/329 (33.13%), Postives = 161/329 (48.94%), Query Frame = 3 
Query:  492 CRYTCHAKCVTLVDLEC--PKKPTTEKSREELTKETLEILNDVTDGAATLKRKNNNLPNYVSSISQLSKLIKEYNKE--SSLIMTLHEDYTFDGFIRVHMNLSRPVNVSSDVSNLTLKKAVAKNKSMNRKSISDVFNIDTNIKRRTSTSDDXXXXXXXXXXXXXXFANDPATLIPTGSRKGRRPSRRLSFYMPKGTYKPLHVTSKTTAREVIEALLAKYNVTDNPKKFALYEKRTNEAPGSREKEVMYRRIPDEENPLVLCLSWGASKDGSPTFALKENEDGKVQWEYFELPELNNFLKILQLEEDELIAGVMQKYENYREELCKALES 1466
            C++TCH +C  LV L+C  P+    E + E  T     +  +  D                 S +++ + IKEYN +  S+L M+L++D ++ GFI+V                L L + V+   S    S+ D         RR                               G  +G    RR SFY+PK   K LHV S+T AREVIEALL K+ V D+P+KFAL+E+        R  +V  R++ D+E PL L L  G S D + +F LKEN+ G+V W+ F +PEL+NFL+ILQ EE+E +  ++QKY   R+++ +AL +
Sbjct:   89 CKFTCHYRCRALVCLDCCGPRDLGWEPAVERDTNVDEPVEWETPD----------------LSQAEIEQKIKEYNAQINSNLFMSLNKDGSYTGFIKV---------------QLKLVRPVSVPSSKKPPSLQDA--------RR-------------------------------GPGRGTSVRRRTSFYLPKDAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFER------AERHGQVYLRKLLDDEQPLRLRLLAGPS-DKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQEALHA 340
The following BLAST results are available for this feature:
BLAST of TCONS_00067503 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RASF18.278e-3833.13Ras association domain-containing protein 1 OS=Hom... [more]
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