TCONS_00067502 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067502
Unique NameTCONS_00067502
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4422

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067502 ID=TCONS_00067502|Name=TCONS_00067502|organism=Clytia hemisphaerica|type=transcript|length=4422bp
TAAATCTGCGTGTGATGGTTTCTTTCTGAAAAATTCTGTGGTCAATTTTG
TTTTATTCAGTTTTGTTGTTGTTAATTATTGAGCTGTAATGAGTAGAAGA
CGTATTATTTCAGCAGTGTGTTAGTAAGAGCTCTTCTTTGTTTATGTGGT
GCACTGagcagagaaaatttttggaattggATATTGTGTTTCTTGATGAA
ATCGTTACATTATCTTACGAGTGATATGAAAAACGTTGCTGCAGGAAGTC
ACCACGgcaacaaaaagaaattaactTTTTACGCATTGCGCGAGAAGCGC
TCATTCGATTTATCCAGTACTTTTCTACCGTTGACTGAATGCTACGTCGA
TGTCTATTGTCGGTACACGTGCCATGCGAAATGTGTGACTTTGGTTGATC
TCGAATGTCCCAAAAAACCTACCACAGAAAAGTCAAGAGAAGAACTCACC
AAAGAAACTCTGGAAATACTCAACGATGTAACGGATGGTGCAGCCACACT
AAAGCGTAAAAACAACAACTTGCCAAATTATGTGTCCTCCATATCTCAAT
TGAGCAAATTAATCAAGGAATATAATAAAGAATCATCATTAATAATGACC
CTGCACGAAGATTATACATTCGATGGCTTCATACGAGTGCACATGAACTT
GAGCAGACCTGTCAACGTATCTTCAGATGTCAGCAATTTAACCCTCAAAA
AGGCTGTCGCAAAGAACAAATCCATGAACCGGAAATCGATATCAGACGTC
TTCAACATCGACACCAACATCAAACGAAGGACGTCCACTAGTGATGATTC
AGGGATTGGTTCCCAGTCTTCCACTGCTTCGTCTACCATCTTCGCAAACG
ACCCTGCAACTCTCATCCCTACGGGCTCAAGGAAAGGAAGGAGACCGTCT
CGCCGTTTAAGTTTCTACATGCCGAAAGGAACTTATAAACCGTTACACGT
CACAAGCAAAACAACAGCCCGTGAGGTGATCGAAGCACTTTTAGCAAAAT
ACAACGTTACGGATAATCCCAAGAAGTTCGCTCTCTATGAGAAACGGACC
AATGAAGCACCTGGAAGTCGTGAGAAAGAAGTGATGTACCGACGTATACC
CGACGAAGAGAATCCTTTGGTGTTATGTTTATCATGGGGTGCTTCAAAAG
ATGGATCGCCAACTTTTGCTCTTAAAGAAAACGAAGATGGGAAAGTACAG
TGGGAGTACTTCGAACTTCCAGAGTTAAACAATTTCCTGAAGATTCTTCA
ACTGGAAGAAGACGAACTCATTGCAGGgGTCATGCAAAAGTATGAGAATT
ATCGTGAAGAGTTGTGCAAAGCTTTAGAATCTAAATCGCCAGAGTCAACG
GGGACTTGATAGAGAAATTCTCTTTTTCAAATTGAGGTTAGGTGGAGATG
AAAGGAGTTTCTTTGAGTTGGTCATTCAAAATGTGAAAGAGAAGATTGAT
AAAGAGATATTCCAGTAGAAATGAAGAGAGGGTTATGACGGCATCCCATC
TGCTTCTGTGAGTCGGTCAACCTTTTTCATAGAACATGACTGAATAATGG
AAACCGTCAACTAATTGAATCAAACCACGGCATAACAACATTTTTATTGA
ATAGGAGAGCTGAAGTTTGGTTTTGAAAACCGAAAATGTTTCGTtctgtt
attttttaaatatttttggtgacGAATATTCCCTTGTCTTGTCTTATTTG
AAACCCCGAAACAATCCTAACTCCTAAGAGATGTTCATCTTTTggagaaa
aataaaacttttaaaggtACTGTCTGAGGCTAAGAAAttaattaaaagat
tttataCCGTATTTCAATTCCAAgataatgaaaattgaaaagattCGAAA
AGTTTTCTAGACGGATTATTTTTCATCCCAAAACTTCAAATTACAAGAGA
GGGATATAGTAGACTAGGAATGGGAATAGAAAACCTCGGTTATATACTAC
ACATACAATTTCTATACAGTAATAATTTATTCTTATcttttattagcaat
tgttttTGATGTAGACGAAGGTGGATTATTTTTCATATGATATTTTTTGA
TAAGATTCACATTTTTTTTGCGTTGttatttaaaaggaaaatttccCCTT
CTAAATATTAAACTGATACAACAAATATAAGGAGAACGACATTTTGTAAA
TTAAGGAGCTGTAAATATTCTAGTTTTCTGAAAAACAATTTTAACAAGAA
ATATATAGATACTATTTTATCTAAAGATTTACATATAATACGTGCTTAAA
AAATTGTCCTTGAGTAAGCCTATGTAGAAGTTTGAGACCTATTTTTAATC
CATGATAAACTTCGCATATGTCTAAACTTTTTGGGGAAACATTTTCGTTG
TATTTCCTGTCGAAATGACTTGGACCTCCATATGTAAACCAAAGGAGCCA
ACGCACTAGATGAAAAACTTATCATTTTGATGGTAAACCTTGCGATCATC
AAGTGTTTTTCATCACTTCTAGTCAAATAATTTCTTGTCATATTATCAAC
TAAGTAGAATATGGCCATAGGTCCCCAACAAAGCAGGTAGGTGAACATGA
AGGCCAACGACAGTCTTGTTGCTTTCAACTCCATCGCGAATTGAAATGCA
CTTGTTTTTGAAGCAGTTTTGGTAAGTTGTTTTCGTCTATATACCAGTGA
TGTCATCTCATATGAATTGTTTGATTCATTCGAATTCGAATCGTGAAAAT
ACTTATCAACCGATCTGATTTTTTCTCGATCTAATTGATTCTCAGTGAAA
CTATTGACACTGTCCCTTAAGCGCCTGTCATGTAACCCTTTACGGAAAGC
TATCTTCCATATGACATAGTAATTACACACAAGTATAAAGAATGGAATGG
TGTTGAAGATAGTAATCACTGTCAAACTCCATACATATGTCGGTACATAT
CCACATCGCTCGTTCGTTTCAGCTTTCATATAAAATGGCATGATGTCGAT
GATTGCGACAAAGATCCAAACAGACAACAAGATGACCAACATATTTCGAC
GATTGATGACTTTATTATACGTCATGGGACGTTTGATGGAATACAAACGA
TCGAAACTGACCACTAGTAGATTCAACTTCATCGCATGTCCACTGTAGAA
GTAAGCGAACCGATATGTTGCGCAAACCCACAGATGATCATCCACAAATT
TGGTGTGTAGGTATCGATACAGATATAATGGCATCGCAAATAAATCTTGA
ATGGCTGCTGCAAACATAAAGCTAATGATCGGGTAGTTTGGTAATATTCG
CAGTTTTTCACTTGACAACAACATGGTGATGGTAAACAGATCAAAAGTTA
CCATGACAATACATATCGGAACAATAATACCCAAACTCACTTCTTCACTA
TGGAAACCAAACAGGGAATCGCTTGTCACGTTTGAGTTTTCGATCATTCT
TTTGTAACTCAAGATAGCAATCGACCACCCTGGATATAAGTATCGAATTa
tgttgatttttcaagtttttcttttcacaCACCTCTTTTCTCTATTTCAC
GATGTTGTATACTGGTCCTTCACACAGCTTTTATATAATGAACACGTAAA
GCAATAgtgaagatttttttcattaaagtTTTATCAGCTTTTTGCATCTG
CTTTAAAAGTTCGTCCAAtcatttctttctttcattttatgatCTTTTTG
CTGGCCTTGGAATAACAAAATATAACtttaatgaaaaacaaagaaatgta
cgATCGACATTTTGATGATAAGAGTATACCCTCAACCTCAAATATAAACT
TTGATTTTTATTGGCTCATCCAAAGCTTAGCACCCTCTACAACTAAACTA
GGATTAGGATTTATTTCTGTAAATCATATCTAGACAGTATTTTTATATCt
tatcaaaaaaggaaaaagttaGTCGCCATTTTATACTGAAATGTAAAGTG
CAAGCCCCCTTCCTCCATCAGATAAGGAGGCCTGGTGGGTGGCGAGGGAA
TTGCgttagagtgcaaggtaccttcTCATACTCCAGTGTCATATCATGGT
TTCCCTAACAAAAACTCATCCTTTATTTGGCCTGGTGGAATAAGCCCCCT
TGGTACAAATTGCATTTATGATGCGATNAAGTGCAAGCCCCCTTCCTCCA
TCAGATAAGGAGGCCTGGTGGGTGGCGAGGGAATTGCgttagagtgcaag
gtaccttcTCATACTCCAGTCTCATATCATGGTTTCCCTAACAAAAACTC
ATCCTTTATTTGGCCTGGTGGAATAAGCCCCCCTTGGTACAAATTGCATT
TATGATGCGATTTGAAATTCGATCGGCACTGTGCACAAGAAAACTTCCAA
ActgaagaaagaaaatctaaaagatTTCCTTCTTCCTTGTTTAAAGTCAA
ATAAGAACACGAGATGAGTTATCAAAATCAACATAAATCTGTAAAAAAGA
GCAAACACTTCAACCAttcttg
Run BLAST on NCBI

transcript from alignment at scaffold_47:404308..412390-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067502 ID=TCONS_00067502|Name=TCONS_00067502|organism=Clytia hemisphaerica|type=transcript|length=8083bp|location=Sequence derived from alignment at scaffold_47:404308..412390- (Clytia hemisphaerica)
TAAATCTGCGTGTGATGGTTTCTTTCTGAAAAATTCTGTGGTCAATTTTG
TTTTATTCAGTTTTGTTGTTGTTAATTATTGAGCTGTAATGAGTAGAAGA
CGTATTATTTCAGCAGTGTGTTAGTAAGAGCTCTTCTTTGTTTATGTGGT
GCACTGAGCAGAGAAAATTTTTGGAATTGGATATTGTGTTTCTTGATGAA
ATCGTTACATTATCTTACGAGTGATATGAAAAACGTTGCTGCAGGAAGTC
ACCACGGCAACAAAAAGAAATTAACTTTTTACGCATTGCGCGAGAAGCGC
TCATTCGATTTATCCAGTACTTTTCTACCGTTGACTGAATGCTACGTCGA
TGTCTGTAAGTTCCAAAAGCTAATTTTCATGCCGGTTAAAAATCTCAAGG
TCGACTTATGAAAGGAGGAGTCTAACTAATTCCGTAAATTTAGCCGTCTT
CATTATTCACATGCATGGATGTTATATGAAGTATGATGTCATTTTCAAAT
ACAGCTCAAAAAAAGATGTTGATTCGGTCTATTGAAAGATTTTGAATTCG
AATTTCACCGCCGAAAGTTTTAGCAGCTTTCAAAAGACGCGAAAATTGAA
TAATTTTGCTTCCCCAAGAGTAAGTTGAATTTGTAAAATCTAAAATTAGC
ACGTTCTTTTGGATCAGAAAATTTAAAACTTTAAAACTCGACGTACCTTT
ATATCTTTAGATTGTCGGTACACGTGCCATGCGAAATGTGTGACTTTGGT
TGATCTCGAATGTCCCAAAAAACCTACCACAGAAAAGTCAAGAGAAGAAC
TCACCAAAGAAACTCTGGAAATACTCGTGAGAACTTTATTTTCATTTTCA
TCTCTTCTTTCGTTTATTAAAAGATTCTTCTAGAAAGTTCTTAACAAGTC
TCAATTTCGTTCACAGTTTTCAAGGAAGGAAGGATGTTTAGTTACCTGTA
GTTCTGCTCACGAGGAAACTCTTTTGCTAGTGAGATCATGGTTGTACTTC
TCCCCCTCCCCCTTTTTCATCTATTAATTCTTAATGTGAAAAAATCATTC
ATCGTTTCTGTAAATCAAATACGCTGGGATTCTTCACAGAAAGAACATGA
ATCTTTTACAAGCGGGACCATTTTCTTCGTATTTTGTTTGATTGATAGAT
TGATGCATTCATATACTGTATATCATGCTCTTCTGAATCAAGTTTCTGGC
TGCTCTGTTATCTTTTTCTCTCTTTATTTGTATAGGATGCATATTTTTTC
TCTCAAGTTTTGAACTGAAGTTTGTGAACACAATTTTTACTCAGTTTTTG
AGAAAGCGTGTAGAATCAAATATTGCTACTGTTTGCGAGAGAAGGAAAAT
GTTATGAAATTATCAGCTCGTTGAACACAATTCGGACCTATTTAAGAATC
AAGTTATAACCATGCTTAAATTTGCAACTAACTTAGCAAAGAAAAGCTCG
CGAGATCTGACCTTGAAACGTTCTCCAGAATTGACATTGAAAAGTTCGCC
ACCGGCAGATTTAACATTAAAAGGTTTGTCAGATCTAACTTTAAAGAGTT
CTTCTTGTTTGAGAAGTGATGCAGAAGCTTTTGCAGACCTATGCATGGAA
GACGTGACCCCGACTTCTACTCCAGAAGCAGAAATTATTGATCTAACAGA
TCCTAAAGCATGGCAAGAAAGGGTAATTATATGCTTTATCATTTGTGAAT
TTTATTCAGTTTTCAGCTTATTTATTACAGTTCGCTCTAGTTTTATAGGT
TTTCCTATTCAAAGCAATTTAGTTCATTTCTTAAAAATTTTGATAGTTTA
GTTTTGTATTTAAGGTCTTTAAAGATAGTAGGTTTTCTCATTTTAGACAA
AGATTTTTATTGGATGAAATGTTTATTAGATCAAGTGATTGATATGTAGT
CTTTCTTAGCCAGGGATTTTGGAGGATTTTTCGAGATTTTATAAAGAAAC
TCAATCAAAAAGACTTTTTTTCCTTTTTGTANATCAAGTGATTGATATGT
AGTCTTTCTTAGCCAGGGATTTTGGAGGATTTTTCGAGATTTTATAAAGA
AACTCAATCAAAAAGACTTTTTTTTCCTTTTTGTTAAACCAATATTGTGA
TCCTTCTGCGTTATCTACTATCAACTTCTTTTAGGGTATAATAACAGATG
GGTTGTCCAAAAGTCTGTGTCTGTCTGGATTTGGGATATTATTAAATTTC
TTATTTTGATGTTTATAGAACGATGTAACGGATGGTGCAGCCACACTAAA
GCGTAAAAACAACAACTTGCCAAATTATGTGTCCTCCATATCTCAATTGA
GCAAATTAATCAAGGAATATAATAAAGAATCATCATTAATAATGACCCTG
GTACGTTTATTTCCCATCAAAGCGCAATCAATTTCTTGATATTGGTCATG
TACTTTGCCATTTAATATATAATTTTCAATGTTTTTTATGCGTAATTTTG
AAACAATTTGATAGTTTCTATTTTGATATATGCAGTTTGAAAATAGACTC
TCTTTGATTGGTCAAGTGGGTTAATTAGCGTCTAAGCAACTAAACCTGTT
ATGGTTCCTGGCATGTTGGGCACCCTGATCAAGCAGTTGTTTGAGGAAAG
TTTTGATATGTTACTTCAAACATGATGTAGTCATTGCGTTCAAAAGAAGT
CTGAACTTGATAATCCTTTTAATCTTTGATTGAAACTTTCCAACGTCTCT
AAAGCTGCAACTCATTCCATTTTTCTGATGAAACTCATATTTAGGTTGTA
CCAGAATTATCCCTCATGAAAGAAATCTTGCTTTTCTTCATTTTAGCACG
AAGATTATACATTCGATGGCTTCATACGAGTGCACATGAACTTGAGCAGA
CCTGTCAACGTATCTTCAGATGTCAGCAATTTAACCCTCAAAAAGGCTGT
CGCAAAGAACAAATCCATGAACCGGAAATCGATATCAGACGTCTTCAACA
TCGACACCAACATCAAACGAAGGACGTCCACTAGTGATGATTCAGGGATT
GGTTCCCAGTCTTCCACTGCTTCGTCTACCATCTTCGCAAACGACCCTGC
AACTCTCATCCCTACGGGCTCAAGGAAAGGAAGGGTAAATATTTGACTTT
TAGAACCTTCACCTTCCTCTACTCAATACAAGTTACTTACAAATCAATAT
GCTTTTCTCAAGTAACCTCGCATAACGAAATCATTTTTAAACTGTGGCAA
GATTTTGAACACGCTGTTGACGTCCTTATTCTCTTTACTTGTTCTTTTTT
TACATATCAGAGACCGTCTCGCCGTTTAAGTTTCTACATGCCGAAAGGAA
CTTATAAACCGTTACACGTCACAAGCAAAACAACAGCCCGTGAGGTAATT
TCAGCTTTTTCACACATTTCCGCATTTTAATATTTCTTTCTTCCTCGTTG
GTGACTTATTCTTGATATGCGCAAGTCAAGATTACATCATTTTTTTCATA
TTGGAAACATCCGAAAAAACAGGAATTTGACCCATGTGTTGCTAGTTTTG
GTAACTCACTCACCACATTCTGGTGTTGTTTCGGGTGTTTCCGATAGGGA
AAATCACGTAATCTTGCCTTATGCATATCAAGANACACGCTGTTGACGTC
CTTATTCTCTTTACTTGTTCTTTTTTTACATATCAGAGACCGTCTCGCCG
TTTAAGTTTCTACATGCCGAAAGGAACTTATAAACCGTTACACGTCACAA
GCAAAACAACAGCCCGTGAGGTAATTTCAGCTTTTTCACACATTTCCGCA
TTTTAATATTTCTTTCTTCCTCGTTGGTGACTTATTCTTGATATGCGCAA
GTCAAGATTACATCATTTTTTTCATATTGGAAACATCCGAAAAAACAGGA
ATTTGACCCATGTGTTGCTAGTTTTGGTAACTCACTCACCACATTCTGGT
GTTGTTTCGGGTGTTTCCGATAGGGAAAATCACGTAATCTTGCCTTATGC
ATATCAAGAATTCTAAAGTTTACAACAGCCCCTGTGTCACAGGCCTGGTG
GACCCCCCCCCCACCAACTGAAAAACTGAACTGAACTCTTTGCCACTTCG
GCGATGATATTTAGATAGAGAATTACTGTTTTCAAAATTGAAGATGAAAT
AATCCGCTTTGACAAAGTTTGACATTCATTTTTATTATTATAGGTGATCG
AAGCACTTTTAGCAAAATACAACGTTACGGATAATCCCAAGAAGTTCGCT
CTCTATGAGAAACGGACCAATGAAGCACCTGGAAGTCGTGAGAAAGAAGG
TACTAAATTTTCAATGGGTCGACTAATGGATAAAATCAAAATGATAATCA
ATACATAACATTATTAAAGTCCACAACGATATCGTAGTGGCTTGAGTATA
AAAAGGTCTCTCAAACTATTCATGATACAGATGTAGTTTTAGACGTCCCT
TCATTCTTACCAAGTTCAATTTAGATTTCTTTAACCATAATATAATCAAT
TTCTACTTCAGTGATGTACCGACGTATACCCGACGAAGAGAATCCTTTGG
TGTTATGTTTATCATGGGGTGCTTCAAAAGATGGATCGCCAACTTTTGCT
CTTAAAGAAAACGAAGATGGGAAAGTACAGGTACGTCACGTCATTTTTGA
TGAGTATGAGGCAGGGTTTTGTTTATATCTTGCTCTGTTATTGTTGGTGT
TTCTTTTTGGCTTTATTTACTTTTACTCTGTTTAATCAATTCTACGTCAT
TTTTGGTTTCAGTGGGAGTACTTCGAACTTCCAGAGTTAAACAATTTCCT
GAAGATTCTTCAACTGGAAGAAGACGAACTCATTGCAGGGGTAAATAATT
TTTGTTGTTCTTTATTATACTTTAGGCCTTTCATTCTACCTGTCACATAC
AATGTCTTTGATTATCAAAAATATTTGAATCAAAATATTCATAGTTTTGG
TTATTTTCAGGTCTTTGACCATCCTTGTTCATTTTTCAGGTCATGCAAAA
GTATGAGAATTATCGTGAAGAGTTGTGCAAAGCTTTAGAATCTAAATCGC
CAGAGTCAACGGGGACTTGATAGAGAAATTCTCTTTTTCAAATTGAGGTT
AGGTGGAGATGAAAGGAGTTTCTTTGAGTTGGTCATTCAAAATGTGAAAG
AGAAGATTGATAAAGAGATATTCCAGTAGAAATGAAGAGAGGGTTATGAC
GGCATCCCATCTGCTTCTGTGAGTCGGTCAACCTTTTTCATAGAACATGA
CTGAATAATGGAAACCGTCAACTAATTGAATCAAACCACGGCATAACAAC
ATTTTTATTGAATAGGAGAGCTGAAGTTTGGTTTTGAAAACCGAAAATGT
TTCGTTCTGTTATTTTTTAAATATTTTTGGTGACGAATATTCCCTTGTCT
TGTCTTATTTGAAACCCCGAAACAATCCTAACTCCTAAGAGATGTTCATC
TTTTGGAGAAAAATAAAACTTTTAAAGGTACTGTCTGAGGCTAAGAAATT
AATTAAAAGATTTTATACCGTATTTCAATTCCAAGATAATGAAAATTGAA
AAGATTCGAAAAGTTTTCTAGACGGATTATTTTTCATCCCAAAACTTCAA
ATTACAAGAGAGGGATATAGTAGACTAGGAATGGGAATAGAAAACCTCGG
TTATATACTACACATACAATTTCTATACAGTAATAATTTATTCTTATCTT
TTATTAGCAATTGTTTTTGATGTAGACGAAGGTGGATTATTTTTCATATG
ATATTTTTTGATAAGATTCACATTTTTTTTGCGTTGTTATTTAAAAGGAA
AATTTCCCCTTCTAAATATTAAACTGATACAACAAATATAAGGAGAACGA
CATTTTGTAAATTAAGGAGCTGTAAATATTCTAGTTTTCTGAAAAACAAT
TTTAACAAGAAATATATAGATACTATTTTATCTAAAGATTTACATATAAT
ACGTGCTTAAAAAATTGTCCTTGAGTAAGCCTATGTAGAAGTTTGAGACC
TATTTTTAATCCATGATAAACTTCGCATATGTCTAAACTTTTTGGGGAAA
CATTTTCGTTGTATTTCCTGTCGAAATGACTTGGACCTCCATATGTAAAC
CAAAGGAGCCAACGCACTAGATGAAAAACTTATCATTTTGATGGTAAACC
TTGCGATCATCAAGTGTTTTTCATCACTTCTAGTCAAATAATTTCTTGTC
ATATTATCAACTAAGTAGAATATGGCCATAGGTCCCCAACAAAGCAGGTA
GGTGAACATGAAGGCCAACGACAGTCTTGTTGCTTTCAACTCCATCGCGA
ATTGAAATGCACTTGTTTTTGAAGCAGTTTTGGTAAGTTGTTTTCGTCTA
TATACCAGTGATGTCATCTCATATGAATTGTTTGATTCATTCGAATTCGA
ATCGTGAAAATACTTATCAACCGATCTGATTTTTTCTCGATCTAATTGAT
TCTCAGTGAAACTATTGACACTGTCCCTTAAGCGCCTGTCATGTAACCCT
TTACGGAAAGCTATCTTCCATATGACATAGTAATTACACACAAGTATAAA
GAATGGAATGGTGTTGAAGATAGTAATCACTGTCAAACTCCATACATATG
TCGGTACATATCCACATCGCTCGTTCGTTTCAGCTTTCATATAAAATGGC
ATGATGTCGATGATTGCGACAAAGATCCAAACAGACAACAAGATGACCAA
CATATTTCGACGATTGATGACTTTATTATACGTCATGGGACGTTTGATGG
AATACAAACGATCGAAACTGACCACTAGTAGATTCAACTTCATCGCATGT
CCACTGTAGAAGTAAGCGAACCGATATGTTGCGCAAACCCACAGATGATC
ATCCACAAATTTGGTGTGTAGGTATCGATACAGATATAATGGCATCGCAA
ATAAATCTTGAATGGCTGCTGCAAACATAAAGCTAATGATCGGGTAGTTT
GGTAATATTCGCAGTTTTTCACTTGACAACAACATGGTGATGGTAAACAG
ATCAAAAGTTACCATGACAATACATATCGGAACAATAATACCCAAACTCA
CTTCTTCACTATGGAAACCAAACAGGGAATCGCTTGTCACGTTTGAGTTT
TCGATCATTCTTTTGTAACTCAAGATAGCAATCGACCACCCTGGATATAA
GTATCGAATTATGTTGATTTTTCAAGTTTTTCTTTTCACACACCTCTTTT
CTCTATTTCACGATGTTGTATACTGGTCCTTCACACAGCTTTTATATAAT
GAACACGTAAAGCAATAGTGAAGATTTTTTTCATTAAAGTTTTATCAGCT
TTTTGCATCTGCTTTAAAAGTTCGTCCAATCATTTCTTTCTTTCATTTTA
TGATCTTTTTGCTGGCCTTGGAATAACAAAATATAACTTTAATGAAAAAC
AAAGAAATGTACGATCGACATTTTGATGATAAGAGTATACCCTCAACCTC
AAATATAAACTTTGATTTTTATTGGCTCATCCAAAGCTTAGCACCCTCTA
CAACTAAACTAGGATTAGGATTTATTTCTGTAAATCATATCTAGACAGTA
TTTTTATATCTTATCAAAAAAGGAAAAAGTTAGTCGCCATTTTATACTGA
AATGTAAAGTGCAAGCCCCCTTCCTCCATCAGATAAGGAGGCCTGGTGGG
TGGCGAGGGAATTGCGTTAGAGTGCAAGGTACCTTCTCATACTCCAGTGT
CATATCATGGTTTCCCTAACAAAAACTCATCCTTTATTTGGCCTGGTGGA
ATAAGCCCCCTTGGTACAAATTGCATTTATGATGCGATNAAGTGCAAGCC
CCCTTCCTCCATCAGATAAGGAGGCCTGGTGGGTGGCGAGGGAATTGCGT
TAGAGTGCAAGGTACCTTCTCATACTCCAGTCTCATATCATGGTTTCCCT
AACAAAAACTCATCCTTTATTTGGCCTGGTGGAATAAGCCCCCCTTGGTA
CAAATTGCATTTATGATGCGATTTGAAATTCGATCGGCACTGTGCACAAG
AAAACTTCCAAACTGAAGAAAGAAAATCTAAAAGATTTCCTTCTTCCTTG
TTTAAAGTCAAATAAGAACACGAGATGAGTTATCAAAATCAACATAAATC
TGTAAAAAAGAGCAAACACTTCAACCATTCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042152XLOC_042152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067502-exon-scaffold_47-1575043694:412036..412390TCONS_00067502-exon-scaffold_47-1575043694:412036..412390Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1575043694:411565..411680TCONS_00067502-exon-scaffold_47-1575043694:411565..411680Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1575043694:410041..410172TCONS_00067502-exon-scaffold_47-1575043694:410041..410172Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1575043694:409307..409594TCONS_00067502-exon-scaffold_47-1575043694:409307..409594Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1575043694:409047..409130TCONS_00067502-exon-scaffold_47-1575043694:409047..409130Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1575043694:408142..408247TCONS_00067502-exon-scaffold_47-1575043694:408142..408247Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1575043694:407811..407929TCONS_00067502-exon-scaffold_47-1575043694:407811..407929Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1575043694:407601..407678TCONS_00067502-exon-scaffold_47-1575043694:407601..407678Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1575043694:404308..407451TCONS_00067502-exon-scaffold_47-1575043694:404308..407451Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1510915933:412036..412390TCONS_00067502-exon-scaffold_47-1510915933:412036..412390Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1510915933:411565..411680TCONS_00067502-exon-scaffold_47-1510915933:411565..411680Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1510915933:410041..410172TCONS_00067502-exon-scaffold_47-1510915933:410041..410172Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1510915933:409307..409594TCONS_00067502-exon-scaffold_47-1510915933:409307..409594Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1510915933:409047..409130TCONS_00067502-exon-scaffold_47-1510915933:409047..409130Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1510915933:408142..408247TCONS_00067502-exon-scaffold_47-1510915933:408142..408247Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1510915933:407811..407929TCONS_00067502-exon-scaffold_47-1510915933:407811..407929Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1510915933:407601..407678TCONS_00067502-exon-scaffold_47-1510915933:407601..407678Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1510915933:404308..407451TCONS_00067502-exon-scaffold_47-1510915933:404308..407451Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1491911889:412036..412390TCONS_00067502-exon-scaffold_47-1491911889:412036..412390Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1491911889:411565..411680TCONS_00067502-exon-scaffold_47-1491911889:411565..411680Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1491911889:410041..410172TCONS_00067502-exon-scaffold_47-1491911889:410041..410172Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1491911889:409307..409594TCONS_00067502-exon-scaffold_47-1491911889:409307..409594Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1491911889:409047..409130TCONS_00067502-exon-scaffold_47-1491911889:409047..409130Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1491911889:408142..408247TCONS_00067502-exon-scaffold_47-1491911889:408142..408247Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1491911889:407811..407929TCONS_00067502-exon-scaffold_47-1491911889:407811..407929Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1491911889:407601..407678TCONS_00067502-exon-scaffold_47-1491911889:407601..407678Clytia hemisphaericaexon
TCONS_00067502-exon-scaffold_47-1491911889:404308..407451TCONS_00067502-exon-scaffold_47-1491911889:404308..407451Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:404308..412390 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	1.1856e-09	0	0	0.052956	0.113624	3.54111e-07	3.4683	0.529272	0.00641833	0.586452	1.72969	0.0987786	0.759938	2.19954	1.11252	0.234352	0.075098	0	0	0.00514574	0.454355	0	0.159958	0.0782195	0.0838584	0	0.00192152
Blast
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BLAST of TCONS_00067502 vs. Swiss-Prot (Human)
Match: RASF1 (Ras association domain-containing protein 1 OS=Homo sapiens GN=RASSF1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 7.843e-38
Identity = 109/329 (33.13%), Postives = 161/329 (48.94%), Query Frame = 1 
Query:  358 CRYTCHAKCVTLVDLEC--PKKPTTEKSREELTKETLEILNDVTDGAATLKRKNNNLPNYVSSISQLSKLIKEYNKE--SSLIMTLHEDYTFDGFIRVHMNLSRPVNVSSDVSNLTLKKAVAKNKSMNRKSISDVFNIDTNIKRRTSTSDDXXXXXXXXXXXXXXFANDPATLIPTGSRKGRRPSRRLSFYMPKGTYKPLHVTSKTTAREVIEALLAKYNVTDNPKKFALYEKRTNEAPGSREKEVMYRRIPDEENPLVLCLSWGASKDGSPTFALKENEDGKVQWEYFELPELNNFLKILQLEEDELIAGVMQKYENYREELCKALES 1332
            C++TCH +C  LV L+C  P+    E + E  T     +  +  D                 S +++ + IKEYN +  S+L M+L++D ++ GFI+V                L L + V+   S    S+ D         RR                               G  +G    RR SFY+PK   K LHV S+T AREVIEALL K+ V D+P+KFAL+E+        R  +V  R++ D+E PL L L  G S D + +F LKEN+ G+V W+ F +PEL+NFL+ILQ EE+E +  ++QKY   R+++ +AL +
Sbjct:   89 CKFTCHYRCRALVCLDCCGPRDLGWEPAVERDTNVDEPVEWETPD----------------LSQAEIEQKIKEYNAQINSNLFMSLNKDGSYTGFIKV---------------QLKLVRPVSVPSSKKPPSLQDA--------RR-------------------------------GPGRGTSVRRRTSFYLPKDAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFER------AERHGQVYLRKLLDDEQPLRLRLLAGPS-DKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQEALHA 340
The following BLAST results are available for this feature:
BLAST of TCONS_00067502 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RASF17.843e-3833.13Ras association domain-containing protein 1 OS=Hom... [more]
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