TCONS_00067500 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067500
Unique NameTCONS_00067500
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4121

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067500 ID=TCONS_00067500|Name=TCONS_00067500|organism=Clytia hemisphaerica|type=transcript|length=4121bp
CGGCAGATTTAACATTAAAAGGTTTGTCAGATCTAACTTTAAAGAGTTCT
TCTTGTTTGAGAAGTGATGCAGAAGCTTTTGCAGACCTATGCATGGAAGA
CGTGACCCCGACTTCTACTCCAGAAGCAGAAATTATTGATCTAACAGATC
CTAAAGCATGGCaagaaaggAACGATGTAACGGATGGTGCAGCCACACTA
AAGCGTAAAAACAACAACTTGCCAAATTATGTGTCCTCCATATCTCAATT
GAGCAAATTAATCAAGGAATATAATAAAGAATCATCATTAATAATGACCC
TGCACGAAGATTATACATTCGATGGCTTCATACGAGTGCACATGAACTTG
AGCAGACCTGTCAACGTATCTTCAGATGTCAGCAATTTAACCCTCAAAAA
GGCTGTCGCAAAGAACAAATCCATGAACCGGAAATCGATATCAGACGTCT
TCAACATCGACACCAACATCAAACGAAGGACGTCCACTAGTGATGATTCA
GGGATTGGTTCCCAGTCTTCCACTGCTTCGTCTACCATCTTCGCAAACGA
CCCTGCAACTCTCATCCCTACGGGCTCAAGGAAAGGAAGGAGACCGTCTC
GCCGTTTAAGTTTCTACATGCCGAAAGGAACTTATAAACCGTTACACGTC
ACAAGCAAAACAACAGCCCGTGAGGTGATCGAAGCACTTTTAGCAAAATA
CAACGTTACGGATAATCCCAAGAAGTTCGCTCTCTATGAGAAACGGACCA
ATGAAGCACCTGGAAGTCGTGAGAAAGAAGTGATGTACCGACGTATACCC
GACGAAGAGAATCCTTTGGTGTTATGTTTATCATGGGGTGCTTCAAAAGA
TGGATCGCCAACTTTTGCTCTTAAAGAAAACGAAGATGGGAAAGTACAGT
GGGAGTACTTCGAACTTCCAGAGTTAAACAATTTCCTGAAGATTCTTCAA
CTGGAAGAAGACGAACTCATTGCAGGgGTCATGCAAAAGTATGAGAATTA
TCGTGAAGAGTTGTGCAAAGCTTTAGAATCTAAATCGCCAGAGTCAACGG
GGACTTGATAGAGAAATTCTCTTTTTCAAATTGAGGTTAGGTGGAGATGA
AAGGAGTTTCTTTGAGTTGGTCATTCAAAATGTGAAAGAGAAGATTGATA
AAGAGATATTCCAGTAGAAATGAAGAGAGGGTTATGACGGCATCCCATCT
GCTTCTGTGAGTCGGTCAACCTTTTTCATAGAACATGACTGAATAATGGA
AACCGTCAACTAATTGAATCAAACCACGGCATAACAACATTTTTATTGAA
TAGGAGAGCTGAAGTTTGGTTTTGAAAACCGAAAATGTTTCGTtctgtta
ttttttaaatatttttggtgacGAATATTCCCTTGTCTTGTCTTATTTGA
AACCCCGAAACAATCCTAACTCCTAAGAGATGTTCATCTTTTggagaaaa
ataaaacttttaaaggtACTGTCTGAGGCTAAGAAAttaattaaaagatt
ttataCCGTATTTCAATTCCAAgataatgaaaattgaaaagattCGAAAA
GTTTTCTAGACGGATTATTTTTCATCCCAAAACTTCAAATTACAAGAGAG
GGATATAGTAGACTAGGAATGGGAATAGAAAACCTCGGTTATATACTACA
CATACAATTTCTATACAGTAATAATTTATTCTTATcttttattagcaatt
gttttTGATGTAGACGAAGGTGGATTATTTTTCATATGATATTTTTTGAT
AAGATTCACATTTTTTTTGCGTTGttatttaaaaggaaaatttccCCTTC
TAAATATTAAACTGATACAACAAATATAAGGAGAACGACATTTTGTAAAT
TAAGGAGCTGTAAATATTCTAGTTTTCTGAAAAACAATTTTAACAAGAAA
TATATAGATACTATTTTATCTAAAGATTTACATATAATACGTGCTTAAAA
AATTGTCCTTGAGTAAGCCTATGTAGAAGTTTGAGACCTATTTTTAATCC
ATGATAAACTTCGCATATGTCTAAACTTTTTGGGGAAACATTTTCGTTGT
ATTTCCTGTCGAAATGACTTGGACCTCCATATGTAAACCAAAGGAGCCAA
CGCACTAGATGAAAAACTTATCATTTTGATGGTAAACCTTGCGATCATCA
AGTGTTTTTCATCACTTCTAGTCAAATAATTTCTTGTCATATTATCAACT
AAGTAGAATATGGCCATAGGTCCCCAACAAAGCAGGTAGGTGAACATGAA
GGCCAACGACAGTCTTGTTGCTTTCAACTCCATCGCGAATTGAAATGCAC
TTGTTTTTGAAGCAGTTTTGGTAAGTTGTTTTCGTCTATATACCAGTGAT
GTCATCTCATATGAATTGTTTGATTCATTCGAATTCGAATCGTGAAAATA
CTTATCAACCGATCTGATTTTTTCTCGATCTAATTGATTCTCAGTGAAAC
TATTGACACTGTCCCTTAAGCGCCTGTCATGTAACCCTTTACGGAAAGCT
ATCTTCCATATGACATAGTAATTACACACAAGTATAAAGAATGGAATGGT
GTTGAAGATAGTAATCACTGTCAAACTCCATACATATGTCGGTACATATC
CACATCGCTCGTTCGTTTCAGCTTTCATATAAAATGGCATGATGTCGATG
ATTGCGACAAAGATCCAAACAGACAACAAGATGACCAACATATTTCGACG
ATTGATGACTTTATTATACGTCATGGGACGTTTGATGGAATACAAACGAT
CGAAACTGACCACTAGTAGATTCAACTTCATCGCATGTCCACTGTAGAAG
TAAGCGAACCGATATGTTGCGCAAACCCACAGATGATCATCCACAAATTT
GGTGTGTAGGTATCGATACAGATATAATGGCATCGCAAATAAATCTTGAA
TGGCTGCTGCAAACATAAAGCTAATGATCGGGTAGTTTGGTAATATTCGC
AGTTTTTCACTTGACAACAACATGGTGATGGTAAACAGATCAAAAGTTAC
CATGACAATACATATCGGAACAATAATACCCAAACTCACTTCTTCACTAT
GGAAACCAAACAGGGAATCGCTTGTCACGTTTGAGTTTTCGATCATTCTT
TTGTAACTCAAGATAGCAATCGACCACCCTGGATATAAGTATCGAATTat
gttgatttttcaagtttttcttttcacaCACCTCTTTTCTCTATTTCACG
ATGTTGTATACTGGTCCTTCACACAGCTTTTATATAATGAACACGTAAAG
CAATAgtgaagatttttttcattaaagtTTTATCAGCTTTTTGCATCTGC
TTTAAAAGTTCGTCCAAtcatttctttctttcattttatgatCTTTTTGC
TGGCCTTGGAATAACAAAATATAACtttaatgaaaaacaaagaaatgtac
gATCGACATTTTGATGATAAGAGTATACCCTCAACCTCAAATATAAACTT
TGATTTTTATTGGCTCATCCAAAGCTTAGCACCCTCTACAACTAAACTAG
GATTAGGATTTATTTCTGTAAATCATATCTAGACAGTATTTTTATATCtt
atcaaaaaaggaaaaagttaGTCGCCATTTTATACTGAAATGTAAAGTGC
AAGCCCCCTTCCTCCATCAGATAAGGAGGCCTGGTGGGTGGCGAGGGAAT
TGCgttagagtgcaaggtaccttcTCATACTCCAGTGTCATATCATGGTT
TCCCTAACAAAAACTCATCCTTTATTTGGCCTGGTGGAATAAGCCCCCTT
GGTACAAATTGCATTTATGATGCGATNAAGTGCAAGCCCCCTTCCTCCAT
CAGATAAGGAGGCCTGGTGGGTGGCGAGGGAATTGCgttagagtgcaagg
taccttcTCATACTCCAGTCTCATATCATGGTTTCCCTAACAAAAACTCA
TCCTTTATTTGGCCTGGTGGAATAAGCCCCCCTTGGTACAAATTGCATTT
ATGATGCGATTTGAAATTCGATCGGCACTGTGCACAAGAAAACTTCCAAA
ctgaagaaagaaaatctaaaagatTTCCTTCTTCCTTGTTTAAAGTCAAA
TAAGAACACGAGATGAGTTATCAAAATCAACATAAATCTGTAAAAAAGAG
CAAACACTTCAACCAttcttg
Run BLAST on NCBI

transcript from alignment at scaffold_47:404308..410888-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067500 ID=TCONS_00067500|Name=TCONS_00067500|organism=Clytia hemisphaerica|type=transcript|length=6581bp|location=Sequence derived from alignment at scaffold_47:404308..410888- (Clytia hemisphaerica)
CGGCAGATTTAACATTAAAAGGTTTGTCAGATCTAACTTTAAAGAGTTCT
TCTTGTTTGAGAAGTGATGCAGAAGCTTTTGCAGACCTATGCATGGAAGA
CGTGACCCCGACTTCTACTCCAGAAGCAGAAATTATTGATCTAACAGATC
CTAAAGCATGGCAAGAAAGGGTAATTATATGCTTTATCATTTGTGAATTT
TATTCAGTTTTCAGCTTATTTATTACAGTTCGCTCTAGTTTTATAGGTTT
TCCTATTCAAAGCAATTTAGTTCATTTCTTAAAAATTTTGATAGTTTAGT
TTTGTATTTAAGGTCTTTAAAGATAGTAGGTTTTCTCATTTTAGACAAAG
ATTTTTATTGGATGAAATGTTTATTAGATCAAGTGATTGATATGTAGTCT
TTCTTAGCCAGGGATTTTGGAGGATTTTTCGAGATTTTATAAAGAAACTC
AATCAAAAAGACTTTTTTTCCTTTTTGTANATCAAGTGATTGATATGTAG
TCTTTCTTAGCCAGGGATTTTGGAGGATTTTTCGAGATTTTATAAAGAAA
CTCAATCAAAAAGACTTTTTTTTCCTTTTTGTTAAACCAATATTGTGATC
CTTCTGCGTTATCTACTATCAACTTCTTTTAGGGTATAATAACAGATGGG
TTGTCCAAAAGTCTGTGTCTGTCTGGATTTGGGATATTATTAAATTTCTT
ATTTTGATGTTTATAGAACGATGTAACGGATGGTGCAGCCACACTAAAGC
GTAAAAACAACAACTTGCCAAATTATGTGTCCTCCATATCTCAATTGAGC
AAATTAATCAAGGAATATAATAAAGAATCATCATTAATAATGACCCTGGT
ACGTTTATTTCCCATCAAAGCGCAATCAATTTCTTGATATTGGTCATGTA
CTTTGCCATTTAATATATAATTTTCAATGTTTTTTATGCGTAATTTTGAA
ACAATTTGATAGTTTCTATTTTGATATATGCAGTTTGAAAATAGACTCTC
TTTGATTGGTCAAGTGGGTTAATTAGCGTCTAAGCAACTAAACCTGTTAT
GGTTCCTGGCATGTTGGGCACCCTGATCAAGCAGTTGTTTGAGGAAAGTT
TTGATATGTTACTTCAAACATGATGTAGTCATTGCGTTCAAAAGAAGTCT
GAACTTGATAATCCTTTTAATCTTTGATTGAAACTTTCCAACGTCTCTAA
AGCTGCAACTCATTCCATTTTTCTGATGAAACTCATATTTAGGTTGTACC
AGAATTATCCCTCATGAAAGAAATCTTGCTTTTCTTCATTTTAGCACGAA
GATTATACATTCGATGGCTTCATACGAGTGCACATGAACTTGAGCAGACC
TGTCAACGTATCTTCAGATGTCAGCAATTTAACCCTCAAAAAGGCTGTCG
CAAAGAACAAATCCATGAACCGGAAATCGATATCAGACGTCTTCAACATC
GACACCAACATCAAACGAAGGACGTCCACTAGTGATGATTCAGGGATTGG
TTCCCAGTCTTCCACTGCTTCGTCTACCATCTTCGCAAACGACCCTGCAA
CTCTCATCCCTACGGGCTCAAGGAAAGGAAGGGTAAATATTTGACTTTTA
GAACCTTCACCTTCCTCTACTCAATACAAGTTACTTACAAATCAATATGC
TTTTCTCAAGTAACCTCGCATAACGAAATCATTTTTAAACTGTGGCAAGA
TTTTGAACACGCTGTTGACGTCCTTATTCTCTTTACTTGTTCTTTTTTTA
CATATCAGAGACCGTCTCGCCGTTTAAGTTTCTACATGCCGAAAGGAACT
TATAAACCGTTACACGTCACAAGCAAAACAACAGCCCGTGAGGTAATTTC
AGCTTTTTCACACATTTCCGCATTTTAATATTTCTTTCTTCCTCGTTGGT
GACTTATTCTTGATATGCGCAAGTCAAGATTACATCATTTTTTTCATATT
GGAAACATCCGAAAAAACAGGAATTTGACCCATGTGTTGCTAGTTTTGGT
AACTCACTCACCACATTCTGGTGTTGTTTCGGGTGTTTCCGATAGGGAAA
ATCACGTAATCTTGCCTTATGCATATCAAGANACACGCTGTTGACGTCCT
TATTCTCTTTACTTGTTCTTTTTTTACATATCAGAGACCGTCTCGCCGTT
TAAGTTTCTACATGCCGAAAGGAACTTATAAACCGTTACACGTCACAAGC
AAAACAACAGCCCGTGAGGTAATTTCAGCTTTTTCACACATTTCCGCATT
TTAATATTTCTTTCTTCCTCGTTGGTGACTTATTCTTGATATGCGCAAGT
CAAGATTACATCATTTTTTTCATATTGGAAACATCCGAAAAAACAGGAAT
TTGACCCATGTGTTGCTAGTTTTGGTAACTCACTCACCACATTCTGGTGT
TGTTTCGGGTGTTTCCGATAGGGAAAATCACGTAATCTTGCCTTATGCAT
ATCAAGAATTCTAAAGTTTACAACAGCCCCTGTGTCACAGGCCTGGTGGA
CCCCCCCCCCACCAACTGAAAAACTGAACTGAACTCTTTGCCACTTCGGC
GATGATATTTAGATAGAGAATTACTGTTTTCAAAATTGAAGATGAAATAA
TCCGCTTTGACAAAGTTTGACATTCATTTTTATTATTATAGGTGATCGAA
GCACTTTTAGCAAAATACAACGTTACGGATAATCCCAAGAAGTTCGCTCT
CTATGAGAAACGGACCAATGAAGCACCTGGAAGTCGTGAGAAAGAAGGTA
CTAAATTTTCAATGGGTCGACTAATGGATAAAATCAAAATGATAATCAAT
ACATAACATTATTAAAGTCCACAACGATATCGTAGTGGCTTGAGTATAAA
AAGGTCTCTCAAACTATTCATGATACAGATGTAGTTTTAGACGTCCCTTC
ATTCTTACCAAGTTCAATTTAGATTTCTTTAACCATAATATAATCAATTT
CTACTTCAGTGATGTACCGACGTATACCCGACGAAGAGAATCCTTTGGTG
TTATGTTTATCATGGGGTGCTTCAAAAGATGGATCGCCAACTTTTGCTCT
TAAAGAAAACGAAGATGGGAAAGTACAGGTACGTCACGTCATTTTTGATG
AGTATGAGGCAGGGTTTTGTTTATATCTTGCTCTGTTATTGTTGGTGTTT
CTTTTTGGCTTTATTTACTTTTACTCTGTTTAATCAATTCTACGTCATTT
TTGGTTTCAGTGGGAGTACTTCGAACTTCCAGAGTTAAACAATTTCCTGA
AGATTCTTCAACTGGAAGAAGACGAACTCATTGCAGGGGTAAATAATTTT
TGTTGTTCTTTATTATACTTTAGGCCTTTCATTCTACCTGTCACATACAA
TGTCTTTGATTATCAAAAATATTTGAATCAAAATATTCATAGTTTTGGTT
ATTTTCAGGTCTTTGACCATCCTTGTTCATTTTTCAGGTCATGCAAAAGT
ATGAGAATTATCGTGAAGAGTTGTGCAAAGCTTTAGAATCTAAATCGCCA
GAGTCAACGGGGACTTGATAGAGAAATTCTCTTTTTCAAATTGAGGTTAG
GTGGAGATGAAAGGAGTTTCTTTGAGTTGGTCATTCAAAATGTGAAAGAG
AAGATTGATAAAGAGATATTCCAGTAGAAATGAAGAGAGGGTTATGACGG
CATCCCATCTGCTTCTGTGAGTCGGTCAACCTTTTTCATAGAACATGACT
GAATAATGGAAACCGTCAACTAATTGAATCAAACCACGGCATAACAACAT
TTTTATTGAATAGGAGAGCTGAAGTTTGGTTTTGAAAACCGAAAATGTTT
CGTTCTGTTATTTTTTAAATATTTTTGGTGACGAATATTCCCTTGTCTTG
TCTTATTTGAAACCCCGAAACAATCCTAACTCCTAAGAGATGTTCATCTT
TTGGAGAAAAATAAAACTTTTAAAGGTACTGTCTGAGGCTAAGAAATTAA
TTAAAAGATTTTATACCGTATTTCAATTCCAAGATAATGAAAATTGAAAA
GATTCGAAAAGTTTTCTAGACGGATTATTTTTCATCCCAAAACTTCAAAT
TACAAGAGAGGGATATAGTAGACTAGGAATGGGAATAGAAAACCTCGGTT
ATATACTACACATACAATTTCTATACAGTAATAATTTATTCTTATCTTTT
ATTAGCAATTGTTTTTGATGTAGACGAAGGTGGATTATTTTTCATATGAT
ATTTTTTGATAAGATTCACATTTTTTTTGCGTTGTTATTTAAAAGGAAAA
TTTCCCCTTCTAAATATTAAACTGATACAACAAATATAAGGAGAACGACA
TTTTGTAAATTAAGGAGCTGTAAATATTCTAGTTTTCTGAAAAACAATTT
TAACAAGAAATATATAGATACTATTTTATCTAAAGATTTACATATAATAC
GTGCTTAAAAAATTGTCCTTGAGTAAGCCTATGTAGAAGTTTGAGACCTA
TTTTTAATCCATGATAAACTTCGCATATGTCTAAACTTTTTGGGGAAACA
TTTTCGTTGTATTTCCTGTCGAAATGACTTGGACCTCCATATGTAAACCA
AAGGAGCCAACGCACTAGATGAAAAACTTATCATTTTGATGGTAAACCTT
GCGATCATCAAGTGTTTTTCATCACTTCTAGTCAAATAATTTCTTGTCAT
ATTATCAACTAAGTAGAATATGGCCATAGGTCCCCAACAAAGCAGGTAGG
TGAACATGAAGGCCAACGACAGTCTTGTTGCTTTCAACTCCATCGCGAAT
TGAAATGCACTTGTTTTTGAAGCAGTTTTGGTAAGTTGTTTTCGTCTATA
TACCAGTGATGTCATCTCATATGAATTGTTTGATTCATTCGAATTCGAAT
CGTGAAAATACTTATCAACCGATCTGATTTTTTCTCGATCTAATTGATTC
TCAGTGAAACTATTGACACTGTCCCTTAAGCGCCTGTCATGTAACCCTTT
ACGGAAAGCTATCTTCCATATGACATAGTAATTACACACAAGTATAAAGA
ATGGAATGGTGTTGAAGATAGTAATCACTGTCAAACTCCATACATATGTC
GGTACATATCCACATCGCTCGTTCGTTTCAGCTTTCATATAAAATGGCAT
GATGTCGATGATTGCGACAAAGATCCAAACAGACAACAAGATGACCAACA
TATTTCGACGATTGATGACTTTATTATACGTCATGGGACGTTTGATGGAA
TACAAACGATCGAAACTGACCACTAGTAGATTCAACTTCATCGCATGTCC
ACTGTAGAAGTAAGCGAACCGATATGTTGCGCAAACCCACAGATGATCAT
CCACAAATTTGGTGTGTAGGTATCGATACAGATATAATGGCATCGCAAAT
AAATCTTGAATGGCTGCTGCAAACATAAAGCTAATGATCGGGTAGTTTGG
TAATATTCGCAGTTTTTCACTTGACAACAACATGGTGATGGTAAACAGAT
CAAAAGTTACCATGACAATACATATCGGAACAATAATACCCAAACTCACT
TCTTCACTATGGAAACCAAACAGGGAATCGCTTGTCACGTTTGAGTTTTC
GATCATTCTTTTGTAACTCAAGATAGCAATCGACCACCCTGGATATAAGT
ATCGAATTATGTTGATTTTTCAAGTTTTTCTTTTCACACACCTCTTTTCT
CTATTTCACGATGTTGTATACTGGTCCTTCACACAGCTTTTATATAATGA
ACACGTAAAGCAATAGTGAAGATTTTTTTCATTAAAGTTTTATCAGCTTT
TTGCATCTGCTTTAAAAGTTCGTCCAATCATTTCTTTCTTTCATTTTATG
ATCTTTTTGCTGGCCTTGGAATAACAAAATATAACTTTAATGAAAAACAA
AGAAATGTACGATCGACATTTTGATGATAAGAGTATACCCTCAACCTCAA
ATATAAACTTTGATTTTTATTGGCTCATCCAAAGCTTAGCACCCTCTACA
ACTAAACTAGGATTAGGATTTATTTCTGTAAATCATATCTAGACAGTATT
TTTATATCTTATCAAAAAAGGAAAAAGTTAGTCGCCATTTTATACTGAAA
TGTAAAGTGCAAGCCCCCTTCCTCCATCAGATAAGGAGGCCTGGTGGGTG
GCGAGGGAATTGCGTTAGAGTGCAAGGTACCTTCTCATACTCCAGTGTCA
TATCATGGTTTCCCTAACAAAAACTCATCCTTTATTTGGCCTGGTGGAAT
AAGCCCCCTTGGTACAAATTGCATTTATGATGCGATNAAGTGCAAGCCCC
CTTCCTCCATCAGATAAGGAGGCCTGGTGGGTGGCGAGGGAATTGCGTTA
GAGTGCAAGGTACCTTCTCATACTCCAGTCTCATATCATGGTTTCCCTAA
CAAAAACTCATCCTTTATTTGGCCTGGTGGAATAAGCCCCCCTTGGTACA
AATTGCATTTATGATGCGATTTGAAATTCGATCGGCACTGTGCACAAGAA
AACTTCCAAACTGAAGAAAGAAAATCTAAAAGATTTCCTTCTTCCTTGTT
TAAAGTCAAATAAGAACACGAGATGAGTTATCAAAATCAACATAAATCTG
TAAAAAAGAGCAAACACTTCAACCATTCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042152XLOC_042152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067500-exon-scaffold_47-1575043694:410719..410888TCONS_00067500-exon-scaffold_47-1575043694:410719..410888Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1575043694:410041..410172TCONS_00067500-exon-scaffold_47-1575043694:410041..410172Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1575043694:409307..409594TCONS_00067500-exon-scaffold_47-1575043694:409307..409594Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1575043694:408671..408754TCONS_00067500-exon-scaffold_47-1575043694:408671..408754Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1575043694:408142..408247TCONS_00067500-exon-scaffold_47-1575043694:408142..408247Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1575043694:407811..407929TCONS_00067500-exon-scaffold_47-1575043694:407811..407929Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1575043694:407601..407678TCONS_00067500-exon-scaffold_47-1575043694:407601..407678Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1575043694:404308..407451TCONS_00067500-exon-scaffold_47-1575043694:404308..407451Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1510915933:410719..410888TCONS_00067500-exon-scaffold_47-1510915933:410719..410888Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1510915933:410041..410172TCONS_00067500-exon-scaffold_47-1510915933:410041..410172Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1510915933:409307..409594TCONS_00067500-exon-scaffold_47-1510915933:409307..409594Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1510915933:408671..408754TCONS_00067500-exon-scaffold_47-1510915933:408671..408754Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1510915933:408142..408247TCONS_00067500-exon-scaffold_47-1510915933:408142..408247Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1510915933:407811..407929TCONS_00067500-exon-scaffold_47-1510915933:407811..407929Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1510915933:407601..407678TCONS_00067500-exon-scaffold_47-1510915933:407601..407678Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1510915933:404308..407451TCONS_00067500-exon-scaffold_47-1510915933:404308..407451Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1491911889:410719..410888TCONS_00067500-exon-scaffold_47-1491911889:410719..410888Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1491911889:410041..410172TCONS_00067500-exon-scaffold_47-1491911889:410041..410172Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1491911889:409307..409594TCONS_00067500-exon-scaffold_47-1491911889:409307..409594Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1491911889:408671..408754TCONS_00067500-exon-scaffold_47-1491911889:408671..408754Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1491911889:408142..408247TCONS_00067500-exon-scaffold_47-1491911889:408142..408247Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1491911889:407811..407929TCONS_00067500-exon-scaffold_47-1491911889:407811..407929Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1491911889:407601..407678TCONS_00067500-exon-scaffold_47-1491911889:407601..407678Clytia hemisphaericaexon
TCONS_00067500-exon-scaffold_47-1491911889:404308..407451TCONS_00067500-exon-scaffold_47-1491911889:404308..407451Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:404308..410888 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0.167491	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.37383	0	0	2.74127e-05
Blast
[Close]
BLAST of TCONS_00067500 vs. Swiss-Prot (Human)
Match: RASF1 (Ras association domain-containing protein 1 OS=Homo sapiens GN=RASSF1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.324e-35
Identity = 95/267 (35.58%), Postives = 139/267 (52.06%), Query Frame = 3 
Query:  237 SISQLSKLIKEYNKE--SSLIMTLHEDYTFDGFIRVHMNLSRPVNVSSDVSNLTLKKAVAKNKSMNRKSISDVFNIDTNIKRRTSTSDDXXXXXXXXXXXXXXFANDPATLIPTGSRKGRRPSRRLSFYMPKGTYKPLHVTSKTTAREVIEALLAKYNVTDNPKKFALYEKRTNEAPGSREKEVMYRRIPDEENPLVLCLSWGASKDGSPTFALKENEDGKVQWEYFELPELNNFLKILQLEEDELIAGVMQKYENYREELCKALES 1031
            S +++ + IKEYN +  S+L M+L++D ++ GFI+V                L L + V+   S    S+ D         RR                               G  +G    RR SFY+PK   K LHV S+T AREVIEALL K+ V D+P+KFAL+E+        R  +V  R++ D+E PL L L  G S D + +F LKEN+ G+V W+ F +PEL+NFL+ILQ EE+E +  ++QKY   R+++ +AL +
Sbjct:  135 SQAEIEQKIKEYNAQINSNLFMSLNKDGSYTGFIKV---------------QLKLVRPVSVPSSKKPPSLQDA--------RR-------------------------------GPGRGTSVRRRTSFYLPKDAVKHLHVLSRTRAREVIEALLRKFLVVDDPRKFALFER------AERHGQVYLRKLLDDEQPLRLRLLAGPS-DKALSFVLKENDSGEVNWDAFSMPELHNFLRILQREEEEHLRQILQKYSYCRQKIQEALHA 340
The following BLAST results are available for this feature:
BLAST of TCONS_00067500 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RASF17.324e-3535.58Ras association domain-containing protein 1 OS=Hom... [more]
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