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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067496 ID=TCONS_00067496|Name=TCONS_00067496|organism=Clytia hemisphaerica|type=transcript|length=1705bp
GCTATGCGGTGGCAAGATATGGTAATTAATTACATGATTTGGATGCTGGA
GgaataaaaaagtcattaaagtGGTGGATTATCAGCAGTATAAAAGCAAC
AGAAGGGCGGAGAGTGAATGAAATGCTGTCGCATGGCAACGGCCACCTTC
TCAATGGCACTTCCCCGTTGATGACATCGAGCAGTAAACCAGTTGTTTAT
AAGCTTGGTATTTATGGTTGGCGGAAGAGATGTTTGTTCTTTCTCATCTT
CTTGATTGCAATCGTCTCCATTATCAACTTGGCCTTGATTGTATGGATTA
TGAGAGTTCAACAGTTCGGACTGaACGGTATGGGCAAACTTGAAATAACG
AACAAAGGTTTACGAATGGATGGAGTTGCTGAGTTTACTGAAGTTTTGCG
TGCCAACAAGATCACGAGTCGAGATAACTCACCTCTTCGCATCAGTTCAC
GGCGAAATTTATCACTATCAGCTCTGGACGAACACGGCAATGTGGTTGGT
CAAATCAATATCGATAACAACCAAatcattttgaagaacaaaCAACTTCA
TATTCAAGATCGTAAAGGAAGAACCTTGTTGTATGCCGATGAGAAGAAAG
TCAAACTTGATCTTCAGAACATGGAGATTTCAGTTCCTGGAGGATTAAAG
CTCAACGAATCTGTACAAACACCGCTCGTTCAAGCACCGGAGAATGGCAA
CTTGAAGTTGGAATCACTTTCTAAAGGATTGCATATGAACGCACCGCATG
ACATCGTGGTGGATTCGTACGGTGGGAACCTGAAGATGAGCAGCCTCTCT
GATATCATGTTCACATCTAAGAGCGGAAAGATTTTGTTGGATACAAGCAA
GGTCGAGTTGAAGAACATTCCTCTCTCTTCCATTCCTGGCAAGCTGGATG
GGAAAGTGTACGCTGACGTATCGGAAGTTTGTGTTTGCAAAGATGGCACC
ATCTTCTTGGCACCCGCAGACTCTAAACTACCATGTAAAGTTACTGCTGG
CGTGTGTCCTCCTTGAATGGAATGTGTTCACATTTGGGTAAAGAGAGAAA
GGTGCTATGTGTAATAAATAGTAGATTCCGAGAGACACTTTACAAGAGGA
TCCGAGTAAGCGATTGAATATTATGCTACCGATGTCAAGACATCTCCTCA
CCTAATATTGCATGGATGCCAGAGAAACGGCTACACAAGCTTAGGAGCAT
ATTATATTTGANATTTCCTCACCTAATATTGCATTGATGCCAGAGAAACG
GCTACACAAGCTTAGGAGCATATTATATTTGAAGATCTAAGAAGGGAAGA
TTTTGACGAGCTTTATCCCACACTTCTAACAGCAATATTCACGTCATATC
TGGTCAAAAACACTTGGAACTCTGTAAGGAAATGCAAGATTATTTTAACG
TAACTTAATtaacaaacaaaaattcaattttggtTTTACAAGAAGGAAGA
CAAGATGTAATTTTAAAATGACTAACGACCGTTGTTCAATGGTTTTATCT
ACGACCGTAAAAGTTATTATCGAATTGCCGACAATCATTTGGTAATCGTT
ATATTATAAGTATATTATATTGTGTGAATAGTGTAAGATaatatgttatt
tttttatgaattgatTTCTACATTACTTGTAGAGCgaatgtaaatatcat
atttatttCCCAAAGAAATGGAGAAAAACATCAAGACAATAAACAGTATG
AAGAC Run BLAST on NCBI transcript from alignment at scaffold_47:351882..362642- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067496 ID=TCONS_00067496|Name=TCONS_00067496|organism=Clytia hemisphaerica|type=transcript|length=10761bp|location=Sequence derived from alignment at scaffold_47:351882..362642- (Clytia hemisphaerica)
GCTATGCGGTGGCAAGATATGGTAAGACAAATGTCTTATACATGACCATA
ATGAAGAAATTTTTCATTTTCTGTATCTATTTACGAGAAATAATAATAGA
TTTGTTGTTAAAAAAGTCTTGTTCATCAATTTTCTAGACAAATCTTTCTT
GGGAAACTTGAATCGTGTTCATCGATCACTACCTTGAATGTCATATTCAA
TTTTTAGTCTTTTTGATTCATTTTGTGTGTCTAATCTCATTTGGTTTTGT
GAATGCTCTGAATAAAATTGCTTAACAAGATCACTTACCTACCTCTGCGA
GTTTTGAAGCTCATTTGTCTCTCACTGCACTCATCATTTGTAAACAATGT
ATGTGACTTTGATAGGCTGTGTTATGGAGTTTTCTTGAGACCTCAGGTGG
GAAGTTGATTACTGACAAAATACATAAAGGCTGACTGGACTTTGTTACAA
TACTGATGGTAATTATTCGAAGGCGTTTTGGTTGAAATCAAATCTAAAAA
CTTTCAACATCTGCTGACTCGGACTCGTTTTTAGGTACGATAAAGTCTTT
AGATTGTTTTACCCTTTCTATATTCTGAATTTCAGCTCAACGTTGCCGTT
AGTGTAGAATCTATGGGGCGATATTTTCGTGAAGAGAGCTGATGAAATTC
AAATGAATATAATACCAATATTTCCATAGAGACTATGTTTGATTTTAACA
CCAAGGGATGAAAATTTACTAACTAATAGTTTAAGCAAACTGTTTGTTAA
TTTTACAAGTTTATTTCTATACTTTTGGCAAGTTTAAAACAAAATCCCAG
CTGATAATCTGTTTTCGTGTTTGGGTTGTAGTGTTTTGAATTGTTGATTG
AGCTTGTTTGGATTTTATGAGTTTTCATGAAATTGGAGTCTGTTTTTTAT
AGCGAGAATCGGAACTCCTATCGTGTCCGTTTTGAATGGGCGTACTTTTC
CGTTTGGATTTATATTTGTTTAAAGGGGCTTATGTTATTTTCGGGATTGG
AAATTTCTCATGATGATATTGGTTGTTTTTTTCTGAATGAAATTGAGGTT
TTGCAAAACACTTGAACTGTTATCAGTTCATCTCATTTCGTTTTCATTCT
TTTTCTTGATGAACTTAAAGGATTTTGGTATTTTCGTTAAGATGCGGTCC
CTTTTGAACCTTCTTTAAAGCATACTTCATATTAATCACATTAATAGCAT
CAAGGGGCTCATAATGTAAACTAGCCCTTCAAATACATACTGAAAAATTA
GTTAAGGGTGCNTTAATCACATTAATAGCATCAAGGGGCTCATGATGTAA
ACTAGCCCTTCAAATACATACTAAAAATTTAGTTAAGGGTGTAGTTTCAT
TAGACCCCTCTGTTTCACTGAACTATTTACTTTATAAACATCCAGTTTTC
AAACTTGTTGCTAAAAACTTTGTATTTGTTTAGCGTTCTGTTTCGAAAAA
GTCTACTTGAAAAGAATTAAAGATTTAATCTTTTCCTTGACATTTTTCAT
CTGCAGAAAGAGGGTTTTCCTTCCATTTCACATGCTGAAGCTTGAAAAGA
TCCATATGAAATATATTGTGTTACAGAAAGACGCTTGTTAGAGCTGGGTG
TAGACTCGTTAGTTTGTCTGTTTGAGATTTGGATCTTTTTTTTTCAATTT
TTCCTTATTTGCTTTGATATGTTCGTGATGCTTTCACGTGGTTCGCCTAT
TCTTATTCACGTACGTAAAGATTCCACGAGTTACTCATTTCAGACCCGTC
GTTCTTTACAAATGGTTGGTATAGTATGATGCTTGTTGAATGTAGCTTTT
AAGAAAAGACGGGATGATAGCTAAGGAAGATGTTGCTAGTTTCTGTTTTA
TTTACAGAAAAAGTGTACTGTAGCTAAGTTCTGGAATATTGGTGCTCTCG
TTTTATACTTTACCATGCTTTCTTTAATTTTGAAGTCTTAACGATCGGCA
ACTTTCCAAACTTTCCATTCACAATATGAAACAAAGCTCTGTACTATTGA
TAGGGAATCGCCTGATAGTCCACAAAGAAGGAGAAAAGAACAAAAAGAAT
TCCTTCTAATGTTTCATGAGGAAAGGGGGTGACGACAAACCGATATCCTT
CCTCTATCTCCGTTAATCCATAACAAGAAGTTAAACAAATACAGACAACG
AGGAGCCTACTCCATTCTTCCACTTCCATAAGCTTCTAAGAGTCTACTAC
TTGTTTTTGTGTCTTTTCTCTTTGAATAAAAATTGGAAGGACCTTCGCTA
TTGACAGTTGGATATAAACGAGTGCTCTGTATGAAGACGAAGTCGAGGAA
TAGTGCGAAAAATTAAATTTGCTTTTCACCTTAACATTATTGCATGGACA
TACTTTATATCATAACATTTCTTACATCAATTGCACTATTTTGTGGTTAT
GTCACTGTTGCATTGACACGAGGTTTGCAATTTTGGTATTGGTATCAAAA
TAAGCTCGTTAACTTTCTCATTAAATGAAGGCTAGTTGCTAATGAGAATA
TGGAAAGGAAATTGTTTGTCTTTCCTTTTTCCATGTATTTTTATCATCAT
CAACCTCGTTCCTGTATATAGTCTCTTGTGATGTGATATCGGAACCTTAA
GACTATAAATAATACATTTACCAGGTAGCCAGGTAAAGGTGAAACTGGCG
AAAATCATACAATCAAAGTTCGTAGACTTTGAAGTGTATAATGAAATCAT
CATGTGGTTGTGTCACTGTTGTGTCATCATTCCAGTGCCAAAATGTTTGT
AGTTGTAGTAACCTACTCAACGAATGAAACAGCACATACAAATGGCATCA
TTAGAAGATCTTAATATATCATTTATAGAATTAATGTCATTTTAGTGTCA
AAATGAGGCTTTATTTATCAAAGCGACAGTTTTGTACGTAGCACATTGGC
ATCGTCTTTATAATGCGTATACACTCAGATAGTAGACTGGGAATCCAGTC
GTTTATAACGTTTTTGTTGAAAGCGGGAAATTTTTATGTCGGTATATGGT
TAAAATAAACGACTGGGCTAAGGTGGTTTCCGTAGCTTACGGGAGTTCCA
GCAGGGCCCGCAGATTTCTGCGGGGTGAGAAAACAATCATATACAACAAA
ATATATAAACAAATAAAAATTTCAACCAATGAGAATTTCTAAGTGAAAGA
AAAAAAAACCAAACCAAAACAAACCAACAAGACCCCTGAAAATGTTATCC
AAAAACATGAANTTTATAGAATTAATGTCATTTTAGAGTCAAAATGAGGC
TTTATTTATCAAAGCGACAGTTTCGTACGTAGCACATTGACATCGTCTTT
AATGCGTATACACATAGATAGAAAAGAGCTGTCTTTTTATTTCGATAGAA
AGCGAGGGAAAGAGTTGAAAAGGACGCATTACGGAAGCATATAAACGTCA
TAAGAACAATACACAAGGAGATGTCACCAATGACTTTAATAGTTTCCTAT
TTAAAGAAAAGAAAAACATTTAATGCGCTGCTACCTGATCCTTTAATAAT
GATGGATGTGAAGGAAAGGGAGAGATGTATTTTTGGTTGATTGTATTATA
TCGTGTAGTAAAGAAAGCAGTTTGGTAATATGTGGTTGATTAGCTATTAT
CATTTCGTTGTCTCGCACTATATTGATTGGAATTGTCAGTGTTTTCTTCA
AGTCCATGAGTTACAGGTAGTTTAGAATATTGGAATAGTGTTGACTTTTG
TACTATTAGTAATAGTATTACTTATCTATTAGTGGACAAGGCAGATGTTT
TATTTAGATGTGCAATTTTTTAGCCTAATCGTGGTAGCGACATCTTTGCA
ACCTTAAGGCTCAATTTTAATCCTCTCATATTTAAGTTTATGATCGAAAT
GATATGATATATTGTGTTACATTCGTGTTTGCCGAGCCTGCGGTAGCTTG
CATGACCGAAAAATATCTTTTGTTATTAATACGAAAGTCTTACACCGCAT
TGTTACAAAGCCTTTTCGTATGTCTGTGTTTAAGATTTCGTGAAATGGCG
GTCTTTAAGCACCGTAAAACCATGCTAAAACCATGCTAAAACCATTTCAA
GAATGGTGTAAAGGCTTTCAAAATATTGGTTATAATTTCTATAGTAGACG
GTCTTTTGCGAATAAACTTTCCTTGATACTTACCAGTTTTGTTGTATGTT
TTTTCATGGTTACAAGTCAACAACAGAGCGACTGCATTTGATTGATTGCA
ATATGTAAAGGATAAAATCCATTTGCATGCTCAAATCTTACTATTAGTTT
TATAGTTGGAGGACAAGAAGTGGTGTTTGGAGCTTGGAGATGGATTTCTC
TCACTTTTTCTGCCCAGTCAACAGATAAGGATTCCCTTCTAGCTCTACCC
AGCAGTACTTAATACTTCTTGACCTCCTTACCGACCTGTAGTTTTAAGGT
AGTTAAATACAAAGGTCAAATAGTATCTTCTGAGTTTGAGATGCCCATCA
ATTGATTTTAGAACAATTTCATTGTTGAACCTTAAATGTTGGTCTTCTCT
GAGACGAGTTCAGTTTTTCCCTCTCACTCTCTCACTGACATGTTTTGGTC
ATCATTTCTCAGACATCATTAAATTCGTTTATGGTTAAAAAAGAAACGCG
CAATCTCTTATCGAAATCTTATTTGAAATGTTATCTTACGTTCGCATGTC
AAAAAGACCTTCTTTTGCAAGTCAGCTTATCTCAGTGATAAGTCAAGTTT
GATCATTTAAGTACTTGACAGTACTATTTCACTGAAACATCATCTTGACG
TTTGAAGTGTTTATGCGTAGTGTGGCTTTTTTTACATTGTAACCTTCTAA
TGAAATTGCGTTTGTTTGTTTGTTTTGAGAGAGAAACCACCTCTGGTTGG
AAAAGCTAATAGTCTGGTAAGATCTACCCAAAACAATCATTGGCATAATT
CTTAATTCTCACTAATCAGGAATTACAATTGATGTTTGAAATTGCATGTT
TAATCTCTAAAGATGGATCTTTGGATGGTTTGATTTCAGTGAAAAAAAAC
TTTGTTTTGATTGCATCAAAAGTGCATTGTAACGCAGTCAACAAATTCAT
GCTTTTCAACACGAGAAAAAGCTACAGTTTATACAAATTGGGTGTAAAAT
AGTATGGATGAAATGATATGGCTCTATTGAACAACTTGCGATATTTCTCG
CATTACTGGAAGACAAATTTCTTTTTATAAGAGGTGACAACGAGGTGAAT
TGTGTCTTTTAACATGTTTTTCTTGTCGCCAACTCCTTGCGTGTGACAAA
TGAGCCTCACCATTCTTGTAGCAAGACATGTCCTGTGATTACGTACGTAG
TACACACGTCAGTAGTCAGTCAGTCTTTGGATGTTTATGATGTTATTTCT
TCTTGCCAAGTTACATGTAGCAACACTTGGCATCAGACACCATCTCGGTG
ATCGAACAGTTAGAATTCAGTATACTTGTATCATTGACGTTTAATTACTT
AAAATATGATGACAAATGTTTTCAAGCAAGGATGTTCTCAGCTTTATACA
TCATCCAGGAAAAATTCAACAAAATATACTGTGACTTTTTGGTTGAACTC
ATTGTAAAAAATTGCAATCTGTTAAAACTTTTAGCATATCGAACTAAATT
ACTAAAATTGCGGTTTTTTGCCTCTCTTTTGATGGTAATTTGTGCACCGT
AACTTTGCGGTTGAATTATCTCCTCCTTTGTCTGTGTAGTTAAAGAAGTA
ACGCCTTTCCTTAATCTCTTATCCCCTCCCCATTTCTTTTGCTTTCCACA
GGTAATTAATTACATGATTTGGATGCTGGAGGAATAAAAAAGTCATTAAA
GTGGTGGATTATCAGCAGTATAAAAGCAACAGAAGGGCGGAGAGTGAATG
AAATGCTGTCGCATGGCAACGGCCACCTTCTCAATGGCACTTCCCCGTTG
ATGACATCGAGCAGTAAACCAGTTGTTTATAAGCTTGGTATTTATGGTTG
GCGGAAGAGATGTTTGTTCTTTCTCATCTTCTTGATTGCAATCGTCTCCA
TTATCAACTTGGCCTTGATTGTATGGATTATGAGAGTTCAACAGTTCGGA
CTGGTGAGTTCTTCGTTTGTTTCATTCTTCCCTTTTTCATTAACGACCCT
GCATTTTGGAGACTCGGTGAGAGTTGAAATACTCAGTGTCGAAGATCTTA
GGACCCAGGGGCCATTCAATCCTGAATGGAAACGTCATCTTTCTAAGCAG
CTTTCACCTTTTTTATGTGATAATCCGCCCCACTACTGATTGTATTCATT
TATCAAATTGTACACAACCCCAATTACTACACAAAAATATATCCATATAG
TATTGTTTATTCAAAAACTTTACACAACCAATTTAGCCAATCAATTTGTT
TTTTAATAGAACGGTATGGGCAAACTTGAAATAACGAACAAAGGTTTACG
AATGGATGGAGTTGCTGAGTTTACTGAAGTTTTGCGTGCCAACAAGATCA
CGAGTCGAGATGTAAGTCACTCATTGTGTTTATTATAAGAAAAATTCCGC
ATCAAAAAGCACTAATGCTGAGAATTTCTCTCACTAACGTCCTCACAGAA
GTATAGGTACCCTTGCACAGAGTGCATTATCGCTGTATCACATTTATATT
ACATCTTGACGACCATAATTAGATGTTATTTTTATAACACGTCTACTATA
AATATCTTTTTACGATAACAATAATTTCTCAACAATGTTGATGTGGTGAA
CCGACACACGAGCGTCATCAAGTACCCATATGGTATTACTTTCACTACCA
AATATAAGCATTTGAGATATCTTCGGGAGGATAATCACGTGTCTTAAAAT
CCAATCTTTCCCTTTTATCAACCATACCGGAACTAATGACACAATTGAAT
TTTCATTCAATATTGCAATTTTTTGACGGTGATTTTATCATAAGGCCCTT
TGTAACACAATTTGTTGCATCGACACTGTTGCCATTTTCACTTGGACATT
CTACTTTTATGCAATGTTATTGCTGAAATTTCTCTCCTTTCAGTTTAAAT
GTTTTAAGGTGTTTTAATAGAAGACAAGAAGCCCAAGGGCATGAAGGCCC
AGCATTAAAAGTTTTGTTTCTAAATAAGAGTGTATAATTTACAAGCTTTT
TTATATTGAATTGGCACGAATGTGGAGCAAGATTGGTCAGAAAGAGGAAG
AGAAAAACATTTTTTTGCTTATATTAGCACAATATAACAAACTGATATGA
AACATGTGTCTAACATGAAACGGGAAAACTTATTTATGTAAAAATAAAAC
TTTTGAAAAATCTTTAACAAACATGATTGTGTTTAAAAGCTCTAACTAAA
GGGAGCAAAAACAAATGATAAAAAGTAAAATTAAAAAGAAACTAGCCTCG
AAAAAATTTTCCCGCAACCACAGCGGCTGCAACCTCAACAGCAGCACTCA
AAAAATGCAAAATTTGTATATAAAAAGGTCCATAAAAACTGAACAATTTG
GAGTTATTGGCTGAAATTTTGTACAGTGACTCACTTTCAGATGCAGATCA
TAATTTAATAAGTGTTTTTCCCAAAATGAGGCTATTTCAAGATGGTTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGAGAGGACAGAAAAACAG
AACACGGCACGGACTGCGGACAGACAGGACAGGACAGACACACGGAAAGT
TCCTCTTGAAAGGCCCCTTCGCTAGCGCTGGGCCAACAACCATAGAGGCT
ATGGAAGAGAGCTGTTTCTTTTATAGATTCTTTTCAAATGTAATAATGAA
ATAAAAGATACGAATTTCTAATTTCAGAACTCACCTCTTCGCATCAGTTC
ACGGCGAAATTTATCACTATCAGCTCTGGACGAACACGGCAATGTGGTTG
GTCAAATCAATATCGATAACAACCAAATCATTTTGAAGAACAAACAACTT
CATATTCAAGATCGTAAAGGAAGAACCTTGTTGTATGCCGATGAGAAGAA
AGTCAAACTTGATCTTCAGAACATGGAGATTTCAGGTGAATTGCACAAAC
TCGTTTCTACACGTTTTTTTTTATAAGAACAAGCTAAGAACATTTTAAGG
CTTTGCAGACTCTAAAACACCTAGTTTCTTAGGAAAATTTACGAAAATGC
TCAAAAAAGGTGAAAATTGACATGTTAAGAACTCTTTTAGGCTTGAAACT
CAAAAAGTTAAGAACATCCGAGGGCTTCAATAATTATGGATGCTCTTATA
AAAAATCTCTTATCTCTCTCCTAGAACTTTACTGCAAAGCACGACACACA
ATAGTTAGTTCAATCAGAAACTAAAATACATACTGCTGCATTAGAACGGA
AAGCACTTGATAGACGTCTAGGTCCTATTCACAAGGTCAATTTCTTAATG
TCTGCATTTTAGTTCCTGGAGGATTAAAGCTCAACGAATCTGTACAAACA
CCGCTCGTTCAAGCACCGGAGAATGGCAACTTGAAGTTGGAATCACTTTC
TAAAGGATTGCATATGAACGCACCGCATGACATCGTGGTGGATTCGTACG
GTGGGAACCTGAAGATGAGCAGCCTCTCTGATATCATGTTCACATCTAAG
AGCGGAAAGGTGAGACGAATTTATGACGTTAAGTTCTCTCATAAGTGAGC
CTCAAAAATAAACAAGTACACAGTGGTAGAGGGTCGAGAGCGGAGGGACC
ATTGTTTTTACATTAACTTTCTCTGGTCGTTTCAGTTAATCAAGCCTTTT
CTGCATCAAGGAATCATTTTCTCTTTCTTTCCTTAGATTTTGTTGGATAC
AAGCAAGGTCGAGTTGAAGAACATTCCTCTCTCTTCCATTCCTGGCAAGC
TGGATGGGAAAGTGTACGCTGACGTATCGGAAGTTTGTGTTTGCAAAGAT
GGCACCATCTTCTTGGCACCCGCAGACTCTAAACTACCATGTAAAGTTAC
TGCTGGCGTGTGTCCTCCTTGAATGGAATGTGTTCACATTTGGGTAAAGA
GAGAAAGGTGCTATGTGTAATAAATAGTAGATTCCGAGAGACACTTTACA
AGAGGATCCGAGTAAGCGATTGAATATTATGCTACCGATGTCAAGACATC
TCCTCACCTAATATTGCATGGATGCCAGAGAAACGGCTACACAAGCTTAG
GAGCATATTATATTTGANATTTCCTCACCTAATATTGCATTGATGCCAGA
GAAACGGCTACACAAGCTTAGGAGCATATTATATTTGAAGATCTAAGAAG
GGAAGATTTTGACGAGCTTTATCCCACACTTCTAACAGCAATATTCACGT
CATATCTGGTCAAAAACACTTGGAACTCTGTAAGGAAATGCAAGATTATT
TTAACGTAACTTAATTAACAAACAAAAATTCAATTTTGGTTTTACAAGAA
GGAAGACAAGATGTAATTTTAAAATGACTAACGACCGTTGTTCAATGGTT
TTATCTACGACCGTAAAAGTTATTATCGAATTGCCGACAATCATTTGGTA
ATCGTTATATTATAAGTATATTATATTGTGTGAATAGTGTAAGATAATAT
GTTATTTTTTTATGAATTGATTTCTACATTACTTGTAGAGCGAATGTAAA
TATCATATTTATTTCCCAAAGAAATGGAGAAAAACATCAAGACAATAAAC
AGTATGAAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067496-exon-scaffold_47-1575043694:362622..362642 | TCONS_00067496-exon-scaffold_47-1575043694:362622..362642 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1575043694:356590..356891 | TCONS_00067496-exon-scaffold_47-1575043694:356590..356891 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1575043694:356182..356283 | TCONS_00067496-exon-scaffold_47-1575043694:356182..356283 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1575043694:353508..353715 | TCONS_00067496-exon-scaffold_47-1575043694:353508..353715 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1575043694:352934..353130 | TCONS_00067496-exon-scaffold_47-1575043694:352934..353130 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1575043694:351882..352756 | TCONS_00067496-exon-scaffold_47-1575043694:351882..352756 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1510915933:362622..362642 | TCONS_00067496-exon-scaffold_47-1510915933:362622..362642 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1510915933:356590..356891 | TCONS_00067496-exon-scaffold_47-1510915933:356590..356891 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1510915933:356182..356283 | TCONS_00067496-exon-scaffold_47-1510915933:356182..356283 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1510915933:353508..353715 | TCONS_00067496-exon-scaffold_47-1510915933:353508..353715 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1510915933:352934..353130 | TCONS_00067496-exon-scaffold_47-1510915933:352934..353130 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1510915933:351882..352756 | TCONS_00067496-exon-scaffold_47-1510915933:351882..352756 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1491911889:362622..362642 | TCONS_00067496-exon-scaffold_47-1491911889:362622..362642 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1491911889:356590..356891 | TCONS_00067496-exon-scaffold_47-1491911889:356590..356891 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1491911889:356182..356283 | TCONS_00067496-exon-scaffold_47-1491911889:356182..356283 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1491911889:353508..353715 | TCONS_00067496-exon-scaffold_47-1491911889:353508..353715 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1491911889:352934..353130 | TCONS_00067496-exon-scaffold_47-1491911889:352934..353130 | Clytia hemisphaerica | exon |
| TCONS_00067496-exon-scaffold_47-1491911889:351882..352756 | TCONS_00067496-exon-scaffold_47-1491911889:351882..352756 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:351882..362642 - |
Blast
BLAST of TCONS_00067496 vs. Swiss-Prot (Human)
Match: SGCD (Delta-sarcoglycan OS=Homo sapiens GN=SGCD PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 2.009e-45 Identity = 96/280 (34.29%), Postives = 163/280 (58.21%), Query Frame = 3
Query: 171 MTSSSKPVVYKLGIYGWRKRCLFFLIFLIAIVSIINLALIVWIMRVQQFGLNGMGKLEITNKGLRMDGVAEFTEVLRANKITSRDNXXXXXXXXXXXXXXALDEHGNVVGQINIDNNQIILKNKQLHIQDRKGRTLLYADEKKVKLDLQNMEISVPGGLKLNESVQTPLVQAPENGNLKLESLSKGLHMNAPHDIVVDSYGGNLKMSSLSDIMFTSKSGKILLDTSKVELKNIPLSS-IPGKLDGKVYADVSEVCVCKDGTIFLAPADSKLPCKVTAGVC 1007
M S P VYK+GIYGWRKRCL+F + L+ I+ ++NLA+ +WI++V F ++GMG L IT KGL+++G +EF + L A +I SR + L S RN++++ L++ V+ Q+ + K+ ++ G+ L AD +V + + + + G +S++TP V+A L+LES ++ L M AP + +++ GN++ + +++ SK G+I LD +K+ L +P S P KV+ E+CVC +G +FL+ A + C++ VC
Sbjct: 13 MPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKIRLPRLPHGSYTPTGTRQKVF----EICVCANGRLFLSQAGAGSTCQINTSVC 288
The following BLAST results are available for this feature:
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