TCONS_00067492 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067492
Unique NameTCONS_00067492
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1955

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067492 ID=TCONS_00067492|Name=TCONS_00067492|organism=Clytia hemisphaerica|type=transcript|length=1955bp
TTCAGATAATCTAAACAAAAATGAAGCTGATTCTGGTAGGACTTCTTTTT
ATTTCGGTTGTTACAGCAATTAGAAGGGCACCGCTGTTTCCAAAGTTCAA
AGGCAGTAAAGTGGAAAATGATTATCAATACAAGGAAATGTGGTATGCTC
AAACTCTTGATCATTTCAACTTTCTGACAACTGATCGACAATTTTCTCAA
AGGTATTTGGTCAGTGATACATATTATAAACCAGGAGGACCAGTGTTCTT
TTACACCGGAAACGAAGGAGATATTGCTTGGTTCTGCAACAATACGGGTT
TTATGTGGGACATCGCTCCAGAGTTCAATGCACTTCTTGTATTTGCTGAG
CATAGATATTATGGTAAATCATTGCCATTTGGAAAAGACTCTTACAAGGA
TGCCGTTCACTTGGGATATCTGAGCTCTGAGCAAGCTCTTGCTGATTTTG
CGACACTTATTACACACATCAGAAAAACGATGCCATCTGTTGCAAACAGT
CCTTTCATTTCTTTTGGAGGCTCCTACGGAGGAATGCTTGCTGCTTGGTT
CCGAATGAAATATCCTGCTTCAGTAGCTGGAGCAATTTCAGCGTCTGCAC
CCATCTTAGCATTTCCTGAAATGAATGATTGTGAGCTCTTCTACAAGATT
GCAACAGAtgatttcaaattagctggagGAGATGTCTGTGCAGCTCAAAT
ACGTAAATCATGGAACACTATCGTCTCTTTGGGTCAAACAGCTATTGGTA
GAAGTCAACTGCAATCAATGTTCCAGTTGTGCAAACCATTGAAAGATATA
AATGATGTGTACATGTTGAATATTTGGTTGAGCGAAGCATGGGTCAACCT
GGCCATGGTTGATTACCCGTACCCTGCATCATTCTTGGAACCATTACCAA
GCTGGCCCATCAAGGAAGTTTGTAAACACTTGCAAGAAGACGCGACTGGT
GTGACATTGATCAAAAACATTGTTGGTGCAGCAAACGTTTATGCCAACTT
CACTGGTCAAACTAAATGTCTGGATATCAATCAGCAAGCTACTGGAAACC
TCGGTGACCAGGGATGGGACTTCCAAGCCTGTACAGAGATGGCAATGCCA
TTATGTCAAGACGGAATCCGTGATATGTGGTTACCAGCAGAGTGGAACTT
CGACGCGTTTGCAAAGGGTTGTGAAACACAGTGGGGAGTAACAACACGAA
AGTATTGGACACAGTCTGTTTATGGCGGATTCAACATTTCTGCTTCAAGC
AATATCGTATTCAGCAATGGTAAATTGGACCCTTGGTCAGGATACGGTGT
TTTGAAATCTCCATCACCCTCCATCGTCACCGTTTTCATTGAAGATGGAG
CGCATCATTTGGATTTGAGATCTGCTAATGACCTCGACCCTCAATCTGTT
ATCGATGCCAGGAATATCCATAAACAAAATATCGAGAAATGGATCCACGA
ATATCAAAAACAACATTAAAGATTATTGCTATGTTTTTGTTATAATGGGA
AAAGGTAACAGGAAAGGCAAATGTATATAGGTAGGATTATTTTTGATTAC
ATAGGTGCGCACATTTTTGAATCCCTGATGTCTCATAAGCCTACTAGGTT
TTATTTGCCAGCTTGAATATCTAGATTAGCTAAGTGTTTTCTTTAATAGG
GATATGAAACCTTTTACTTTTAACGGATTGGAAATTGAATCTGCTCATTA
AAATCTAGGATTTTTTCCGACTGCCGAGTCTAGTTTAGCTtattccaact
gaattttaaagtATTTTCTATCACTGGTGAAGATCTTTAGGCTCTGGCTA
GGGGAGAAAAATGGGTCATACAGGGGTCTACTTTTAATTCACTGCATATG
ATTTTGTATAGTATGCTTAAACTTCACTGCACTGTGTAATTACGTACaat
ttctttggttttatttatttccaatattttggtcaatattttttttgttt
tcatc
Run BLAST on NCBI

transcript from alignment at scaffold_47:318347..325677-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067492 ID=TCONS_00067492|Name=TCONS_00067492|organism=Clytia hemisphaerica|type=transcript|length=7331bp|location=Sequence derived from alignment at scaffold_47:318347..325677- (Clytia hemisphaerica)
TTCAGATAATCTAAACAAAAATGAAGCTGATTCTGGTAGGACTTCTTTTT
ATTTCGGTTGTTACAGCAATTAGAAGGGCACCGCTGTTTCCAAAGTTCAA
AGGCAGTAAAGTGGAAAATGATTATCAATACAAGGAAATGTGGTATGCTC
AAACTGTAAGCTATACTTGATGTGTTTGAGTAAAATTTTGAAAATTATTA
AGAATTATAAAGAAAATTACTTCTCAGAGAAAAAAGTGGTAGTAGATTTT
TTTATAGCCCTACTATAATCTTGTTTATTGTTTTAATTCCAGCTTGATCA
TTTCAACTTTCTGACAACTGATCGACAATTTTCTCAAAGGTATTTGGTCA
GTGATACATATTATAAACCAGGAGGACCAGTGTTCTTTTACACCGGAAAC
GAAGGAGATATTGCTTGGTTCTGCAACAATACGGTATGGCAATAAAGCAC
TCTATCTTTCTGCGAATTATTAGAAAATATTTATCAAATAGCCCTTGTCA
TTAATCCCTTACTAAAACGTTCTATATCTATTTTTTTGAATGGTTAACGA
TCTTAAATGATAAAAGTCACACTACTTTGATTCAAACTATCAAAAAAGCT
GTTGCTCGACATTTTTGTTATCTTGTCTTGCAGGGTTTTATGTGGGACAT
CGCTCCAGAGTTCAATGCACTTCTTGTATTTGCTGAGCATAGATATTATG
GTAAATCATTGCCATTTGGAAAAGACTCTTACAAGGTAGATTTGAAGTAT
ATACCAAACTATTATCAGGTTCAAATGAAAAATATCTCATATCCAACCAC
ACGAAATCTCATGCATTTTAAACATTTTACTTAACCTTGACTTAATTATC
TCATACACTTAAGAGAAACTATGGCTTAATATATCATTCCTTATTTGATT
AAAGGATGCCGTTCACTTGGGATATCTGAGCTCTGAGCAAGCTCTTGCTG
ATTTTGCGACACTTATTACACACATCAGAGTAAGCATACACTTTCAAGGC
TTTTTTACCTTTTTCTCGGATTTGCTTTCAAAGCTTGACTAAAAGAAAAT
CGTATCCCATTACCAAATTGTAAATTTATTCTGAATATGACAAAATGCAA
CCTTCCAAAATTGAGTTTTTGAGATCAATAAAACCTTTCAATTTTGATTC
TTTTTCAGAAAACGATGCCATCTGTTGCAAACAGTCCTTTCATTTCTTTT
GGAGGCTCCTACGGAGGTGAAAACTTTTTACATTTCGATTATGTCATAAG
TCAGAATTCTCTTTTTGAACCTACATGATAATCGTCTAATTGTCTAATTT
TCAATGTTAATCTTTTACCTTACATACTTGATGATTTTCACTTTAGGAAT
GCTTGCTGCTTGGTTCCGAATGAAATATCCTGCTTCAGTAGCTGGGTAAG
TATTTTCTGTAATGTATTCTGTAACAATTCTTTAATGGACTTTTCACAAG
CATCATCTTTTTACTTTTTCACTGAATATTGCCGAAGATGGAATGAATGA
AATCATCAGAGCAATTTAACTAGTTGAAATTCAATGATTTTATCTTGTTC
TCACTTTTAGAGCAATTTCAGCGTCTGCACCCATCTTAGCATTTCCTGAA
ATGAATGATTGTGAGGTGGGTGTTAATTTTTTTAAATAAGGCTCTAACTT
TTTAACTCTATTTATTTCTAAAAAAGGAAAATGAGAAACATTGGCCAGCG
TAATGTCGATGGCATTATTCCCATTCTTTATAAAAAATAGTGCATTGCAG
TTATTTTGAAAATCTCTTTTCAATTAAGATGTCTGACTATTATGTTATAC
TGGGAAACTGGATATCCAAGTTGTGAACGTTTATTTTGTTGATGAAGACG
CATTGATTTAGGAAGACCAGGCAGTAAACCATGTCGACAAAAAAAGTTTA
CAGTCTGGATTTCTAGCATTCACTTTTGTTATATGTAGCTCTTCTACAAG
ATTGCAACAGATGATTTCAAATTAGCTGGAGGAGATGTCTGTGCAGCTCA
AATACGTAAATCATGGAACACTATCGTCTCTTTGGGTCAAACAGGTATAT
CGATTCGAACAAAAGAGGTTTTTAACGTTGTCAGCCAAACCTACTATAGG
TGCCTTAACTTTTAGATTTCAAGTCCTACAGGTCGAGTTGCTAGCACTTT
TCCATAACGAGAAAAAAATTTCTTTCTACTGAGCATAAAAAATGTGGAAT
ATTCAACTATTGTCAAGATGCTTAACTTGTAATTTCTTAATACTTATAAG
TTGTAACACACTTCCTGTTTTTCCCCTAGCTATTGGTAGAAGTCAACTGC
AATCAATGTTCCAGTTGTGCAAACCATTGAAAGATATAAATGATGTGTAC
ATGTTGAATATTTGGTTGAGCGAAGCATGGGTCAACCTGGCCATGGGTAA
ATATCAGAACATGTATATCATACAGCTCCTCATTTTTGACGATAATTTAT
GTCAGTTTTGAAATGCTTTGCAACTGTTAACTTTGTAACCTTGTCAACCG
TTACATTTTAGTTGATTACCCGTACCCTGCATCATTCTTGGAACCATTAC
CAAGCTGGCCCATCAAGGTTTGTGATTTAACTGTCTTACAGTATTATATT
AGGTTTGCACCATTTCTCTTTCATATGATAACTTTTTGTCAACCCATACC
ATGTGAAGGGTACCATAACTGTGATACAAGAGTGTGAGTGATATACCGAA
CTGTGCGGTGTTGGGTGACACTCATCCCGTCCTACGCTCGTGACAAGCAC
TATGCTCTCCTGCGTAGTTCGAGTGTCATCACTATGCACCATGTTAACGA
TGTGACTACCTTTTTAAAAATACTTCATTTATTCCAGAAAATAATTTGAG
TTCATTGTTTTTGATGCTGAACTGAAATTTTTATTTTGTTACTTATGACA
ACCTTTTCTCGCAGACCCACCGGGAAGGGTCCCACTGGAAAAAATTTGCC
AAAATATAAAGAAATATTGTGCTATTTTTTCCATTCCCACTGAATTTTCT
GACGCGAAAACAATTGAATTAAAATCCCCAGCCATAAAAAAATATGGAGT
GACAATCCCCATCGAGTTTTCGTCCGGTATTTTTGCCCCTAATGACTGAA
AAAATCCTACCGGGTCTGTAAGAAGGGGGGCGGGGTGTGAATTTGAATTT
TACGCGTCTGGAAAATCTACTTTACTGATGCGAAAAACCTGTTACGTGAT
TTTTGCATGATTATGAAATAATTCTTAAATGCCAATATTGTAACCCTTTT
CAGGAAGTTTGTAAACACTTGCAAGAAGACGCGACTGGTGTGACATTGAT
CAAAAACATTGTTGGTGCAGCAAACGTTTATGCCAACTTCACTGGTCAAA
CTAAATGTCTGGATATCAATCAGCAAGCTACTGGAAACCTCGGTGACCAG
GGATGGGACTTCCAAGTATGTTTTCTGGACTTTATTTTAATGTTTCTCTT
TCAGTACATTGATATTACTCCAATGACAGAAGGTTTTCAGGCACACAAAG
CTTAATAATCAGCGCTGTCAAGTTGGAATACCCATGATGCTCTTTATCAA
GCAATTCACGTTTTTAATGTGAACTTTGTGTTCAAACTGCTCTTAACGTT
TCTCTCCTTATGTTTCAAAATTGAGCAAAATTGAGAAAACTCGTCTTCAC
ATGTGTATCGCAACTACCCTTTTATAGGCCTGTACAGAGATGGCAATGCC
ATTATGTCAAGACGGAATCCGTGATATGTGGTTACCAGCAGAGGTTTGTC
ACTAATTTTTTATTTTGTTGTCATGCAACCTTGACTCTTAAGGACCTGGT
TGACAAGGGGCAGCGGTTAGATATAGCGAAAAATGGAAATCCTCATTGTT
TGGGGTTAGAATTACTCCCTTTTATACACATTAGCTAAATTTAACTGAAT
CTAATACACCTAACATGAGGTTTTTTTGTTCTTGGATTGTACAAAGTTTT
TCCATAGTAATTTTTCGGAGAAAAGGACTGATTTGAAATTTTGAAAAGTG
ACAATTCTTCCCCGAGGTGATGGTTGTGATCGTATTTCTTTTTCAGTGGA
ACTTCGACGCGTTTGCAAAGGGTTGTGAAACACAGTGGGGAGTAACAACA
CGAAAGTATTGGACACAGTCTGTTTATGGCGGATTCAACATTTCTGCTTC
AAGCAATATCGTATTCAGGTAACATCTTATTTACTCTTTATTGCTTAAGC
AAAAAGAATAAAATCAGGGTCCAGCTAAGAAAACCACCTCACCCAGACCC
ACCAGATCGTCCATAAAATATCGCTTTTGAAAATTTTGTTTACAAGGGGG
CACTCAAGAAGTAGAGGGCAAGTCTGAATATAGCACAACGAGGGTTAATA
TAGTTTGTGTCTAGCAGGCTCTGTCCCGTACAACTGTCTACTTTCAACCG
TTCATTTTTCTTCTCTTCTTTAGCAATGGTAAATTGGACCCTTGGTCAGG
ATACGGTGTTTTGAAATCTCCATCACCCTCCATCGTCACCGTTTTCATTG
AAGATGGAGCGCATCATTTGGATTTGAGATCTGCTAATGACCTCGACCCT
CAATCTGTTATCGATGCCAGGAATATCCATAAACAAAATATCGAGAAATG
GATCCACGAATATCAAAAACAACATTAAAGATTATTGCTATGTTTTTGTT
ATAATGGGAAAAGGTAACAGGAAAGGCAAATGTATATAGGTAGGATTATT
TTTGATTACATAGGTGCGCACATTTTTGAATCCCTGATGTCTCATAAGCC
TACTAGGTTTTATTTGCCAGCTTGAATATCTAGATTAGCTAAGTGTTTTC
TTTAATAGGGATATGAAACCTTTTACTTTTAACGGATTGGAAATTGAATC
TGCTCATTAAAATCTAGGATTTTTTCCGACTGCCGAGTCTAGTTTAGCTT
ATTCCAACTGAATTTTAAAGTATTTTCTATCACTGGTGAAGATCTTTAGG
CTCTGGCTAGGGGAGAAAAATGGGTCATACAGGGGTCTACTTTTAATTCA
CTGCATATGATTTTGTATAGTATGCTTAAACTTCACTGCACTGTGTAATT
ACGTACAATTTCTTTGGTTTTATTTATTTCCAATATTTTGGTCAATATTT
TTTTTGTTTTCATCATTTTATGCACTTCTTCTCGTTTGATACTTACTAAT
ATTGTTGAAAATTGTTTAAAAAAATTTTGTAAAAATTTTATAAGTATATA
TCATTTTTTGTACGAAATAATAAATTAAATTGCATTTGAAACTTTGACCT
GGTTTTACATTTTGATTCACTTATGTACCAACATCAGGAGATGTCGCACA
TAGTATTTTAAAGCAACAAGTTTACTAGCATATTCCTTTTATAATGTTCA
TGCTTTTATAGACCATAAAGAATTTCCTCCTTTTAATTTCAATATTTTGA
TAGCAATGTGAAACATGTTTTCAAACAATTGTTCACCAAACCATTCCAAT
AAACACAGCGTTTTAAATTTCCTTTAAAAAAAAGATTCTCAAAATGTGTT
CACAACAACATTAATTTTTCGAACGTTTTCTTTTGAGTAAACAAAAATAA
TTAACGAAAAGAAAGTAAATTTGAAATCGAATTTATTAATTTCTTTTATT
GTAATGAGACAATGAATTCCATTTGTTTGTTTTGTGGATTACTTCTTATA
GCATGTTGTTGGTCATCACCAGTTGAAGCCAGAGGAAGAAATTACAGGAG
GAATTTTGAAGTTGGAGACCAAGGAGTGTTTATCGATTATGACTATCCGC
AGAGTCCGTTGTCGCATATCTCACCAATAGCTCCGGTAAATGGTTTTATC
TGCTGGGTACTCTTAGATGCCTAACTTAGGGGAAGGAGCAATTTACAAAA
GTTTTGTTAAACGTTAGGGCCTAATTGCAAGGGACTTTTACTCCTAAAGA
GTACCAAGATAGTTAATTAAGGGTTATTTGGTAAATAGTTTCTAAAAGCT
TGAAATTCTTTCAAAACTCAGTGTTCCTTGACAGGTTAAATTCATACCAA
GGATATATTTCAATCTCTCATACAATGGCTGCGGATATAAATACGTTTAT
TTTTCCTGTCTTTTAAATCCTTCCCATTTTCAGTTATTTTATGGTTCAAT
AATTAGTAATTTGACCTTTTCCACCTTATTTTTACCAGGGCGATCCACAC
TACCATGGATTTCTTCCACCGCATCACCCACACCATGATTACGACTATGA
TGACGACGATGATGACGATGAAGACGGTGATGACGACGACGATGACGATG
ATTATGAGGACAGTGATGGCGACGAGGGGGAATATCACCACATTCTACAC
CATCACAATCGTCATGTCCTTGAACAACAAAATGGGTTGTTGAATGNGGA
TTCAACATTTCTGCTTCAAGCAATATCGTATTCAGGTAACATCTTATTTA
CTCTTTATTGCTTAAGCAAAAAGAATAAAATCAGGGTCCAGCTAAGAAAA
CCACCTCATCCAGACCCACCAGATCGTCCATAAAATATCGCTTTTGAAAA
TTTTGTTTACAAGGCGGCACTCAAGAAGTAGAGGGCAAGTCTGAATATAG
CACAACGAGGGTTAATATAGTTTGTGTCTAGCAGGCTCTGTCCCGTACAA
CTGTCTACTTTCAACCGTTCATTTTTCTTCTCTTCTTTAGCAATGGTAAA
TTGGACCCTTGGTCAGGATACGGTGTTTTGAAATCTCCATCACCCTCCAT
CGTCACCGTTTTCATTGAAGATGGAGCGCATCATTTGGATTTGAGATCTG
CTAATGACCTCGACCCTCAATCTGTTATCGATGCCAGGAATATCCATAAA
CAAAATATCGAGAAATGGATCCACGAATATCAAAAACAACATTAAAGATT
ATTGCTATGTTTTTGTTATAATGGGAAAAGGTAACAGGAAAGGCAAATGT
ATATAGGTAGGATTATTTTTGATTACATAGGTGCGCACATTTTTGAATCC
CTGATGTCTCATAAGCCTACTAGGTTTTATTTGCCAGCTTGAATATCTAG
ATTAGCTAAGTGTTTTCTTTAATAGGGATATGAAACCTTTTACTTTTAAC
GGATTGGAAATTGAATCTGCTCATTAAAATCTAGGATTTTTTCCGACTGC
CGAGTCTAGTTTAGCTTATTCCAACTGAATTTTAAAGTATTTTCTATCAC
TGGTGAAGATCTTTAGGCTCTGGCTAGGGGAGAAAAATGGGTCATACAGG
GGTCTACTTTTAATTCACTGCATATGATTTTGTATAGTATGCTTAAACTT
CACTGCACTGTGTAATTACGTACAATTTCTTTGGTTTTATTTATTTCCAA
TATTTTGGTCAATATTTTTTTTGTTTTCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042149XLOC_042149Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067492-exon-scaffold_47-1575043694:325523..325677TCONS_00067492-exon-scaffold_47-1575043694:325523..325677Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:325245..325385TCONS_00067492-exon-scaffold_47-1575043694:325245..325385Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:324943..325044TCONS_00067492-exon-scaffold_47-1575043694:324943..325044Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:324699..324773TCONS_00067492-exon-scaffold_47-1575043694:324699..324773Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:324462..324519TCONS_00067492-exon-scaffold_47-1575043694:324462..324519Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:324283..324331TCONS_00067492-exon-scaffold_47-1575043694:324283..324331Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:324063..324117TCONS_00067492-exon-scaffold_47-1575043694:324063..324117Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:323634..323739TCONS_00067492-exon-scaffold_47-1575043694:323634..323739Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:323282..323398TCONS_00067492-exon-scaffold_47-1575043694:323282..323398Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:323111..323166TCONS_00067492-exon-scaffold_47-1575043694:323111..323166Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:322263..322424TCONS_00067492-exon-scaffold_47-1575043694:322263..322424Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:321935..322000TCONS_00067492-exon-scaffold_47-1575043694:321935..322000Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:321539..321631TCONS_00067492-exon-scaffold_47-1575043694:321539..321631Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:319293..319321TCONS_00067492-exon-scaffold_47-1575043694:319293..319321Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1575043694:318347..319037TCONS_00067492-exon-scaffold_47-1575043694:318347..319037Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:325523..325677TCONS_00067492-exon-scaffold_47-1510915933:325523..325677Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:325245..325385TCONS_00067492-exon-scaffold_47-1510915933:325245..325385Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:324943..325044TCONS_00067492-exon-scaffold_47-1510915933:324943..325044Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:324699..324773TCONS_00067492-exon-scaffold_47-1510915933:324699..324773Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:324462..324519TCONS_00067492-exon-scaffold_47-1510915933:324462..324519Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:324283..324331TCONS_00067492-exon-scaffold_47-1510915933:324283..324331Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:324063..324117TCONS_00067492-exon-scaffold_47-1510915933:324063..324117Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:323634..323739TCONS_00067492-exon-scaffold_47-1510915933:323634..323739Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:323282..323398TCONS_00067492-exon-scaffold_47-1510915933:323282..323398Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:323111..323166TCONS_00067492-exon-scaffold_47-1510915933:323111..323166Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:322263..322424TCONS_00067492-exon-scaffold_47-1510915933:322263..322424Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:321935..322000TCONS_00067492-exon-scaffold_47-1510915933:321935..322000Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:321539..321631TCONS_00067492-exon-scaffold_47-1510915933:321539..321631Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:319293..319321TCONS_00067492-exon-scaffold_47-1510915933:319293..319321Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1510915933:318347..319037TCONS_00067492-exon-scaffold_47-1510915933:318347..319037Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:325523..325677TCONS_00067492-exon-scaffold_47-1491911889:325523..325677Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:325245..325385TCONS_00067492-exon-scaffold_47-1491911889:325245..325385Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:324943..325044TCONS_00067492-exon-scaffold_47-1491911889:324943..325044Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:324699..324773TCONS_00067492-exon-scaffold_47-1491911889:324699..324773Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:324462..324519TCONS_00067492-exon-scaffold_47-1491911889:324462..324519Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:324283..324331TCONS_00067492-exon-scaffold_47-1491911889:324283..324331Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:324063..324117TCONS_00067492-exon-scaffold_47-1491911889:324063..324117Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:323634..323739TCONS_00067492-exon-scaffold_47-1491911889:323634..323739Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:323282..323398TCONS_00067492-exon-scaffold_47-1491911889:323282..323398Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:323111..323166TCONS_00067492-exon-scaffold_47-1491911889:323111..323166Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:322263..322424TCONS_00067492-exon-scaffold_47-1491911889:322263..322424Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:321935..322000TCONS_00067492-exon-scaffold_47-1491911889:321935..322000Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:321539..321631TCONS_00067492-exon-scaffold_47-1491911889:321539..321631Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:319293..319321TCONS_00067492-exon-scaffold_47-1491911889:319293..319321Clytia hemisphaericaexon
TCONS_00067492-exon-scaffold_47-1491911889:318347..319037TCONS_00067492-exon-scaffold_47-1491911889:318347..319037Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:318347..325677 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.76955	5.65651e-06	1.02708	3.03404	7.11936	7.09657	6.81766	4.88809	2.0396	1.30063	9.64385	1.93432	5.01221	0.30177	2.36818	1.12005	2.0519	2.66469	4.79011	5.26194	0.936638	0.373706	1.56302	3.17168	8.62708	35.356	1.93457	0.0447242	3.48111	1.10963
Blast
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BLAST of TCONS_00067492 vs. Swiss-Prot (Human)
Match: PCP (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1)

HSP 1 Score: 506.523 bits (1303), Expect = 6.843e-173
Identity = 241/453 (53.20%), Postives = 317/453 (69.98%), Query Frame = 3 
Query:  126 QYKEMWYAQTLDHFNFLTTDRQFSQRYLVSDTYYKP-GGPVFFYTGNEGDIAWFCNNTGFMWDIAPEFNALLVFAEHRYYGKSLPFGKDSYKDAVHLGYLSSEQALADFATLITHIRKTMPSVANSPFISFGGSYGGMLAAWFRMKYPASVAGAISASAPILAFPEMNDCELFYKIATDDFKLAGGDVCAAQIRKSWNTIVSLGQTAIGRSQLQSMFQLCKPLKDINDVYMLNIWLSEAWVNLAMVDYPYPASFLEPLPSWPIKEVCKHLQE-DATGVTLIKNIVGAANVYANFTGQTKCLDINQQATGNLGDQGWDFQACTEMAMPLCQDGIRDMWLPAEWNFDAFAKGCETQWGVTTRKYWTQSVYGGFNISASSNIVFSNGKLDPWSGYGVLKSPSPSIVTVFIEDGAHHLDLRSANDLDPQSVIDARNIHKQNIEKWIHEY----QKQH 1466
             Y  +++ Q +DHF F  T + F+QRYLV+D Y+K  GG + FYTGNEGDI WFCNNTGFMWD+A E  A+LVFAEHRYYG+SLPFG +S+KD+ HL +L+SEQALADFA LI H+++T+P   N P I+ GGSYGGMLAAWFRMKYP  V GA++ASAPI  F ++  C +F KI T DF+ +G   C+  I +SW+ I  L  T  G   L     LC PL    D+  L  W+SE WVNLAMVDYPY ++FL+PLP+WPIK VC++L+  + +   L++NI  A NVY N++GQ KCL+I++ AT +LG  GW +QACTE+ MP C +G+ DM+ P  WN    +  C  QWGV  R  W  ++YGG NIS+ +NIVFSNG+LDPWSG GV K  + ++V V I +GAHHLDLR+ N LDP SV+ AR++  ++++ WI ++     KQH
Sbjct:   47 NYSVLYFQQKVDHFGF-NTVKTFNQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSGPH-CSESIHRSWDAINRLSNTGSGLQWLTGALHLCSPLTS-QDIQHLKDWISETWVNLAMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCLNISETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWGVRPRPSWITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLDLRTKNALDPMSVLLARSLEVRHMKNWIRDFYDSAGKQH 496
The following BLAST results are available for this feature:
BLAST of TCONS_00067492 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCP6.843e-17353.20Lysosomal Pro-X carboxypeptidase OS=Homo sapiens G... [more]
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