TCONS_00067491 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067491
Unique NameTCONS_00067491
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5134

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067491 ID=TCONS_00067491|Name=TCONS_00067491|organism=Clytia hemisphaerica|type=transcript|length=5134bp
CATTCAGATAATCTAAACAAAAATGAAGCTGATTCTGGTAGGACTTCTTT
TTATTTCGGTTGTTACAGCAATTAGAAGGGCACCGCTGTTTCCAAAGTTC
AAAGGCAGTAAAGTGGAAAATGATTATCAATACAAGGAAATGTGGTATGC
TCAAACTCTTGATCATTTCAACTTTCTGACAACTGATCGACAATTTTCTC
AAAGGTATTTGGTCAGTGATACATATTATAAACCAGGAGGACCAGTGTTC
TTTTACACCGGAAACGAAGGAGATATTGCTTGGTTCTGCAACAATACGGG
TTTTATGTGGGACATCGCTCCAGAGTTCAATGCACTTCTTGTATTTGCTG
AGCATAGATATTATGGTAAATCATTGCCATTTGGAAAAGACTCTTACAAG
GATGCCGTTCACTTGGGATATCTGAGCTCTGAGCAAGCTCTTGCTGATTT
TGCGACACTTATTACACACATCAGAAAAACGATGCCATCTGTTGCAAACA
GTCCTTTCATTTCTTTTGGAGGCTCCTACGGAGGAATGCTTGCTGCTTGG
TTCCGAATGAAATATCCTGCTTCAGTAGCTGGAGCAATTTCAGCGTCTGC
ACCCATCTTAGCATTTCCTGAAATGAATGATTGTGAGCTCTTCTACAAGA
TTGCAACAGAtgatttcaaattagctggagGAGATGTCTGTGCAGCTCAA
ATACGTAAATCATGGAACACTATCGTCTCTTTGGGTCAAACAGCTATTGG
TAGAAGTCAACTGCAATCAATGTTCCAGTTGTGCAAACCATTGAAAGATA
TAAATGATGTGTACATGTTGAATATTTGGTTGAGCGAAGCATGGGTCAAC
CTGGCCATGGTTGATTACCCGTACCCTGCATCATTCTTGGAACCATTACC
AAGCTGGCCCATCAAGGAAGTTTGTAAACACTTGCAAGAAGACGCGACTG
GTGTGACATTGATCAAAAACATTGTTGGTGCAGCAAACGTTTATGCCAAC
TTCACTGGTCAAACTAAATGTCTGGATATCAATCAGCAAGCTACTGGAAA
CCTCGGTGACCAGGGATGGGACTTCCAAGCCTGTACAGAGATGGCAATGC
CATTATGTCAAGACGGAATCCGTGATATGTGGTTACCAGCAGAGTGGAAC
TTCGACGCGTTTGCAAAGGGTTGTGAAACACAGTGGGGAGTAACAACACG
AAAGTATTGGACACAGTCTGTTTATGGCGGATTCAACATTTCTGCTTCAA
GCAATATCGTATTCAGCAATGGTAAATTGGACCCTTGGTCAGGATACGGT
GTTTTGAAATCTCCATCACCCTCCATCGTCACCGTTTTCATTGAAGATGG
AGCGCATCATTTGGATTTGAGATCTGCTAATGACCTCGACCCTCAATCTG
TTATCGATGCCAGGAATATCCATAAACAAAATATCGAGAAATGGATCCAC
GAATATCAAAAACAACATTAAAGATTATTGCTATGTTTTTGTTATAATGG
GAAAAGCATGTTGTTGGTCATCACCAGTTGAAGCCAGAGGAAGAAATTAC
AGGAGGAATTTTGAAGTTGGAGACCAAGGAGTGTTTATCGATTATGACTA
TCCGCAGAGTCCGTTGTCGCATATCTCACCAATAGCTCCGGGCGATCCAC
ACTACCATGGATTTCTTCCACCGCATCACCCACACCATGATTACGACTAT
GATGACGACGATGATGACGATGAAGACGGTGATGACGACGACGATGACGA
TGATTATGAGGACAGTGATGGCGACGAGGGGGAATATCACCACATTCTAC
ACCATCACAATCGTCATGTCCTTGAACAACAAAATGGGTTGTTGAATGAA
CTTGATCGTCGAGCACATCTCAATGAAATATTACTCAAAAATCGGGTGGC
CAACGAGAGATTACATCAGTTGAATTTAGACTTGAATACACATGCACTTG
CTGATCGCATAGCAAGCTTCCATAATGATAACAATCAAGAATTAGCAATG
AAGTTGGCAATGTTAGCAGGACACCATCCTTATCATGAGACATCACACAG
TCAACTAGATATCGGTCCAAATAGTGCTGCACCTTATCTGCAACCACTGG
CAGCATTTCACCACGACCAAAGTCACGCATTAGCTGCCAAACTAGCAATG
TTGGATCACTATCATCCTTTCCAAGCACCTCTCATTCACGATCACGTCAA
CGTTGGTCCTGGCCACTCTCCACCTTATTTACAATCGAACTTCGAAGTGA
CACCAGGGTATAATTTGAACGAATATGGTGACGTTCCAGGATATCGGAAA
CAGAAAATAGATGAAGCAGCCAATCTTCATGAGCATCTACACAACTCTGA
GATCATGATGCATGCTGAGTTGCACGGTCCAGTGCATGTTGACGCTGACG
AAGAAGCAGTAGAGAACGGAGAAGAGTTGGGACATCCTGAGGAGCCAGAC
AAACCTCCACATCTTCATCCACCAGCAGTTCTGGGAGGAATGGATTTCGG
TGGCTTGGATCCTGTTGAAATCGCCAACAAAGCAACTTACactttatctc
ctttagctaaACAAATCAGTGACGCAGCAACTAAAACAACAGCTGAACAC
TTAGCTGGGAAATTCTCAGCTATGGATGATAAATTAATGAACTTGGTTAA
TCGACCAAATCTGTTTGAAGGCGATCCAAAAGCAGTCATGGGTATCGGTA
GATCTCACCATCACCACCATCACACACATGACGAAAACCCAACCTCTACT
CAAAGGAAGGAGGAATTACCTAGCAGTCCTTCACTAAACGATTTAAGTCC
TCAGCCATCCAAGCCACAAAACGCAGACCAGCGAACCAGAGTGACCAACA
AAAATAATGAACATCCAATAAAGAACACGACCATGCCAAGAAATGCAAAT
GACGTTGGACTAAGAAAAAACTCCACTCATTCTGAACTTAGAAACCACCT
AAAACCAGTGAATATAGATAGAACTGCTGAGTTAACAAAACCTATTTCTT
CGAAAAATTCAACCAAACCAGAAGCGAGCTTAAATACTGAGAGTAAGAAA
TCTTCAACAGACTCGACCAAAGTCTTTACTGGAACGACACAATCTTCAAA
GAATTCAACAAATGAAGATAGAATTCCAATCACCAGGAATTCAAACAGAA
ATCTATCAAAACGTCACAAAGGTTTTATAGCATGGAACTTGGTAAATGCA
AATACTAGAACCATCACGAATAGTTTCAACAGTGAAGAATCATCTTCGAT
GAAAAATCATTCAGTCAACAACACAATCCACAAGAAGCACATTGTAGACC
ACACACAAAACAAAAGAGGTGAAATCACTCCAGAAACATTTCAAGGTTCA
ATGCATACTATGGAAAACTTCATCGACGCGCTCGCAGCAAAACCAACTCA
ACCCCGAAGCAAAACTCAACattcaaagaagaaaaattacatcAGGGTTT
CCAAGAACCACATAAAGACATTGAATAGAACGGAAAGAGGACAGGTAAAA
GAGCACGTTCAAAAACCATTGCACGATCTTACCATCCATGTTTCCTTTGG
GGAGGAAGATAAAACATCGCTCAGCAATGGGTCAGTATCTAATCTCACCA
CAGTATCTAACGAAGAAAAACCATCCCACGATAACCCCTCAGGTTCAGTG
TCCGAAATGTTACCTCATCATCAGCATGCTTCGAACAACCAGACAACAAC
GTCATTGCACAAAAATGATGACAAAGCACATTCTTCTATTGATATGCGCA
GTAAGACCACTGAGAGCTCATTTCGACGAACAGTTCCAACTCAAAAGCAA
CACgaggaaaatataaaagaacaaCCAGGACAAATTTCCAATCATCTAAC
ACAGACAACAAACAACACATTACACAGCCAACAGAATAAACCAACCAGGA
AAAGTCCTTCGCATTCCGACGTACTGGAAAATCACCATCTAATCAAGGAT
TCTAAAAATCCAATAACCCTTGATAACAATCAAGACTTGAACTACAACAT
AAATGGACACAAGCACAGCATTTCTTTAGAAATTCAACGAAAATatattg
cttataaaaacatggtTAAACTTTTAAAAGGACAAAGTAAATCTACCTCA
TCAATTGGTCCTTATGGTAACGACACAAACTCTTTCGATTCAAAATCAAG
TGAGCTTGAGGCAAGAAACTCACAGAAAGCTATAAATAAGATTACCAGca
atatcaaagaaaaaaagactgaTTCAAAAAGTCAGGAGAAGTCGTCGGAA
GGTCGCAGTGTCGCTCACAATACAGAAAATGTCCCCTTAGCTATTCCGAT
CAAGAAAATGCCAGGAAATCCAGTGCCAACAGCTGATAATACCAAAGTCT
CAGCATCGTTTGAAAACCACCCAACAGAATCACAAATTCACCATGCTGAA
TTGGTCactcaaaacaataaaaatttgattgagaataagaaaataaaaga
acaatCGACTAAACCTTCATCTAAATCTCTGAATAATGAACTAGCTGAAG
CCACAAAAAATTTACTTCAAAGTGAACTTATTGTCAGTGACAATAAGGAA
ACCAAAAGAAACAGCTCCCATATTTCAGCCCAGAAAATGTCCAAGAAACC
ATCTAAGAATGTACACAAGGACGTCAAAGAGCCTTCACCAACGATTCACG
TCCTTGCCATGGAAAGGGAATTAAAAGACTTGAAAGGAGAAATCGAATCT
CGATATTCGAAGTATAGAAAAATTCGTGATAAACTAATGAAGGATAAgaa
agtgtttttattcaaacctGATGATGTTGATATGACTGTATTAACTGAGC
TGTCCGAAAAACAAACATTGTCCGATAAAACAACTGATAATGACACAGTA
AACAAAGATATTAGAGTAAATAAAGAATTCGTTTCTGATCGCCGTACAGA
TAAAAGTTCAATGGTAGACATTAAGAAAAATACCCAGACCGGATtaagtc
aaaagaaaaacttacaCGGCATTGTAAAGACTTTAAGGAAAGATTATAAA
TCAACGCCCACAAATTCCTGGCATATTCAGTTACAATAGGGAATTTTCTT
AAtataatctttataaatttcttGTATGTATGATTATCCCTGTAAATATC
AGATTTCACTTTAAAAGAGACATTAATTCCTTCA
Run BLAST on NCBI

transcript from alignment at scaffold_47:313829..325679-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067491 ID=TCONS_00067491|Name=TCONS_00067491|organism=Clytia hemisphaerica|type=transcript|length=11851bp|location=Sequence derived from alignment at scaffold_47:313829..325679- (Clytia hemisphaerica)
CATTCAGATAATCTAAACAAAAATGAAGCTGATTCTGGTAGGACTTCTTT TTATTTCGGTTGTTACAGCAATTAGAAGGGCACCGCTGTTTCCAAAGTTC AAAGGCAGTAAAGTGGAAAATGATTATCAATACAAGGAAATGTGGTATGC TCAAACTGTAAGCTATACTTGATGTGTTTGAGTAAAATTTTGAAAATTAT TAAGAATTATAAAGAAAATTACTTCTCAGAGAAAAAAGTGGTAGTAGATT TTTTTATAGCCCTACTATAATCTTGTTTATTGTTTTAATTCCAGCTTGAT CATTTCAACTTTCTGACAACTGATCGACAATTTTCTCAAAGGTATTTGGT CAGTGATACATATTATAAACCAGGAGGACCAGTGTTCTTTTACACCGGAA ACGAAGGAGATATTGCTTGGTTCTGCAACAATACGGTATGGCAATAAAGC ACTCTATCTTTCTGCGAATTATTAGAAAATATTTATCAAATAGCCCTTGT CATTAATCCCTTACTAAAACGTTCTATATCTATTTTTTTGAATGGTTAAC GATCTTAAATGATAAAAGTCACACTACTTTGATTCAAACTATCAAAAAAG CTGTTGCTCGACATTTTTGTTATCTTGTCTTGCAGGGTTTTATGTGGGAC ATCGCTCCAGAGTTCAATGCACTTCTTGTATTTGCTGAGCATAGATATTA TGGTAAATCATTGCCATTTGGAAAAGACTCTTACAAGGTAGATTTGAAGT ATATACCAAACTATTATCAGGTTCAAATGAAAAATATCTCATATCCAACC ACACGAAATCTCATGCATTTTAAACATTTTACTTAACCTTGACTTAATTA TCTCATACACTTAAGAGAAACTATGGCTTAATATATCATTCCTTATTTGA TTAAAGGATGCCGTTCACTTGGGATATCTGAGCTCTGAGCAAGCTCTTGC TGATTTTGCGACACTTATTACACACATCAGAGTAAGCATACACTTTCAAG GCTTTTTTACCTTTTTCTCGGATTTGCTTTCAAAGCTTGACTAAAAGAAA ATCGTATCCCATTACCAAATTGTAAATTTATTCTGAATATGACAAAATGC AACCTTCCAAAATTGAGTTTTTGAGATCAATAAAACCTTTCAATTTTGAT TCTTTTTCAGAAAACGATGCCATCTGTTGCAAACAGTCCTTTCATTTCTT TTGGAGGCTCCTACGGAGGTGAAAACTTTTTACATTTCGATTATGTCATA AGTCAGAATTCTCTTTTTGAACCTACATGATAATCGTCTAATTGTCTAAT TTTCAATGTTAATCTTTTACCTTACATACTTGATGATTTTCACTTTAGGA ATGCTTGCTGCTTGGTTCCGAATGAAATATCCTGCTTCAGTAGCTGGGTA AGTATTTTCTGTAATGTATTCTGTAACAATTCTTTAATGGACTTTTCACA AGCATCATCTTTTTACTTTTTCACTGAATATTGCCGAAGATGGAATGAAT GAAATCATCAGAGCAATTTAACTAGTTGAAATTCAATGATTTTATCTTGT TCTCACTTTTAGAGCAATTTCAGCGTCTGCACCCATCTTAGCATTTCCTG AAATGAATGATTGTGAGGTGGGTGTTAATTTTTTTAAATAAGGCTCTAAC TTTTTAACTCTATTTATTTCTAAAAAAGGAAAATGAGAAACATTGGCCAG CGTAATGTCGATGGCATTATTCCCATTCTTTATAAAAAATAGTGCATTGC AGTTATTTTGAAAATCTCTTTTCAATTAAGATGTCTGACTATTATGTTAT ACTGGGAAACTGGATATCCAAGTTGTGAACGTTTATTTTGTTGATGAAGA CGCATTGATTTAGGAAGACCAGGCAGTAAACCATGTCGACAAAAAAAGTT TACAGTCTGGATTTCTAGCATTCACTTTTGTTATATGTAGCTCTTCTACA AGATTGCAACAGATGATTTCAAATTAGCTGGAGGAGATGTCTGTGCAGCT CAAATACGTAAATCATGGAACACTATCGTCTCTTTGGGTCAAACAGGTAT ATCGATTCGAACAAAAGAGGTTTTTAACGTTGTCAGCCAAACCTACTATA GGTGCCTTAACTTTTAGATTTCAAGTCCTACAGGTCGAGTTGCTAGCACT TTTCCATAACGAGAAAAAAATTTCTTTCTACTGAGCATAAAAAATGTGGA ATATTCAACTATTGTCAAGATGCTTAACTTGTAATTTCTTAATACTTATA AGTTGTAACACACTTCCTGTTTTTCCCCTAGCTATTGGTAGAAGTCAACT GCAATCAATGTTCCAGTTGTGCAAACCATTGAAAGATATAAATGATGTGT ACATGTTGAATATTTGGTTGAGCGAAGCATGGGTCAACCTGGCCATGGGT AAATATCAGAACATGTATATCATACAGCTCCTCATTTTTGACGATAATTT ATGTCAGTTTTGAAATGCTTTGCAACTGTTAACTTTGTAACCTTGTCAAC CGTTACATTTTAGTTGATTACCCGTACCCTGCATCATTCTTGGAACCATT ACCAAGCTGGCCCATCAAGGTTTGTGATTTAACTGTCTTACAGTATTATA TTAGGTTTGCACCATTTCTCTTTCATATGATAACTTTTTGTCAACCCATA CCATGTGAAGGGTACCATAACTGTGATACAAGAGTGTGAGTGATATACCG AACTGTGCGGTGTTGGGTGACACTCATCCCGTCCTACGCTCGTGACAAGC ACTATGCTCTCCTGCGTAGTTCGAGTGTCATCACTATGCACCATGTTAAC GATGTGACTACCTTTTTAAAAATACTTCATTTATTCCAGAAAATAATTTG AGTTCATTGTTTTTGATGCTGAACTGAAATTTTTATTTTGTTACTTATGA CAACCTTTTCTCGCAGACCCACCGGGAAGGGTCCCACTGGAAAAAATTTG CCAAAATATAAAGAAATATTGTGCTATTTTTTCCATTCCCACTGAATTTT CTGACGCGAAAACAATTGAATTAAAATCCCCAGCCATAAAAAAATATGGA GTGACAATCCCCATCGAGTTTTCGTCCGGTATTTTTGCCCCTAATGACTG AAAAAATCCTACCGGGTCTGTAAGAAGGGGGGCGGGGTGTGAATTTGAAT TTTACGCGTCTGGAAAATCTACTTTACTGATGCGAAAAACCTGTTACGTG ATTTTTGCATGATTATGAAATAATTCTTAAATGCCAATATTGTAACCCTT TTCAGGAAGTTTGTAAACACTTGCAAGAAGACGCGACTGGTGTGACATTG ATCAAAAACATTGTTGGTGCAGCAAACGTTTATGCCAACTTCACTGGTCA AACTAAATGTCTGGATATCAATCAGCAAGCTACTGGAAACCTCGGTGACC AGGGATGGGACTTCCAAGTATGTTTTCTGGACTTTATTTTAATGTTTCTC TTTCAGTACATTGATATTACTCCAATGACAGAAGGTTTTCAGGCACACAA AGCTTAATAATCAGCGCTGTCAAGTTGGAATACCCATGATGCTCTTTATC AAGCAATTCACGTTTTTAATGTGAACTTTGTGTTCAAACTGCTCTTAACG TTTCTCTCCTTATGTTTCAAAATTGAGCAAAATTGAGAAAACTCGTCTTC ACATGTGTATCGCAACTACCCTTTTATAGGCCTGTACAGAGATGGCAATG CCATTATGTCAAGACGGAATCCGTGATATGTGGTTACCAGCAGAGGTTTG TCACTAATTTTTTATTTTGTTGTCATGCAACCTTGACTCTTAAGGACCTG GTTGACAAGGGGCAGCGGTTAGATATAGCGAAAAATGGAAATCCTCATTG TTTGGGGTTAGAATTACTCCCTTTTATACACATTAGCTAAATTTAACTGA ATCTAATACACCTAACATGAGGTTTTTTTGTTCTTGGATTGTACAAAGTT TTTCCATAGTAATTTTTCGGAGAAAAGGACTGATTTGAAATTTTGAAAAG TGACAATTCTTCCCCGAGGTGATGGTTGTGATCGTATTTCTTTTTCAGTG GAACTTCGACGCGTTTGCAAAGGGTTGTGAAACACAGTGGGGAGTAACAA CACGAAAGTATTGGACACAGTCTGTTTATGGCGGATTCAACATTTCTGCT TCAAGCAATATCGTATTCAGGTAACATCTTATTTACTCTTTATTGCTTAA GCAAAAAGAATAAAATCAGGGTCCAGCTAAGAAAACCACCTCACCCAGAC CCACCAGATCGTCCATAAAATATCGCTTTTGAAAATTTTGTTTACAAGGG GGCACTCAAGAAGTAGAGGGCAAGTCTGAATATAGCACAACGAGGGTTAA TATAGTTTGTGTCTAGCAGGCTCTGTCCCGTACAACTGTCTACTTTCAAC CGTTCATTTTTCTTCTCTTCTTTAGCAATGGTAAATTGGACCCTTGGTCA GGATACGGTGTTTTGAAATCTCCATCACCCTCCATCGTCACCGTTTTCAT TGAAGATGGAGCGCATCATTTGGATTTGAGATCTGCTAATGACCTCGACC CTCAATCTGTTATCGATGCCAGGAATATCCATAAACAAAATATCGAGAAA TGGATCCACGAATATCAAAAACAACATTAAAGATTATTGCTATGTTTTTG TTATAATGGGAAAAGGTAACAGGAAAGGCAAATGTATATAGGTAGGATTA TTTTTGATTACATAGGTGCGCACATTTTTGAATCCCTGATGTCTCATAAG CCTACTAGGTTTTATTTGCCAGCTTGAATATCTAGATTAGCTAAGTGTTT TCTTTAATAGGGATATGAAACCTTTTACTTTTAACGGATTGGAAATTGAA TCTGCTCATTAAAATCTAGGATTTTTTCCGACTGCCGAGTCTAGTTTAGC TTATTCCAACTGAATTTTAAAGTATTTTCTATCACTGGTGAAGATCTTTA GGCTCTGGCTAGGGGAGAAAAATGGGTCATACAGGGGTCTACTTTTAATT CACTGCATATGATTTTGTATAGTATGCTTAAACTTCACTGCACTGTGTAA TTACGTACAATTTCTTTGGTTTTATTTATTTCCAATATTTTGGTCAATAT TTTTTTTGTTTTCATCATTTTATGCACTTCTTCTCGTTTGATACTTACTA ATATTGTTGAAAATTGTTTAAAAAAATTTTGTAAAAATTTTATAAGTATA TATCATTTTTTGTACGAAATAATAAATTAAATTGCATTTGAAACTTTGAC CTGGTTTTACATTTTGATTCACTTATGTACCAACATCAGGAGATGTCGCA CATAGTATTTTAAAGCAACAAGTTTACTAGCATATTCCTTTTATAATGTT CATGCTTTTATAGACCATAAAGAATTTCCTCCTTTTAATTTCAATATTTT GATAGCAATGTGAAACATGTTTTCAAACAATTGTTCACCAAACCATTCCA ATAAACACAGCGTTTTAAATTTCCTTTAAAAAAAAGATTCTCAAAATGTG TTCACAACAACATTAATTTTTCGAACGTTTTCTTTTGAGTAAACAAAAAT AATTAACGAAAAGAAAGTAAATTTGAAATCGAATTTATTAATTTCTTTTA TTGTAATGAGACAATGAATTCCATTTGTTTGTTTTGTGGATTACTTCTTA TAGCATGTTGTTGGTCATCACCAGTTGAAGCCAGAGGAAGAAATTACAGG AGGAATTTTGAAGTTGGAGACCAAGGAGTGTTTATCGATTATGACTATCC GCAGAGTCCGTTGTCGCATATCTCACCAATAGCTCCGGTAAATGGTTTTA TCTGCTGGGTACTCTTAGATGCCTAACTTAGGGGAAGGAGCAATTTACAA AAGTTTTGTTAAACGTTAGGGCCTAATTGCAAGGGACTTTTACTCCTAAA GAGTACCAAGATAGTTAATTAAGGGTTATTTGGTAAATAGTTTCTAAAAG CTTGAAATTCTTTCAAAACTCAGTGTTCCTTGACAGGTTAAATTCATACC AAGGATATATTTCAATCTCTCATACAATGGCTGCGGATATAAATACGTTT ATTTTTCCTGTCTTTTAAATCCTTCCCATTTTCAGTTATTTTATGGTTCA ATAATTAGTAATTTGACCTTTTCCACCTTATTTTTACCAGGGCGATCCAC ACTACCATGGATTTCTTCCACCGCATCACCCACACCATGATTACGACTAT GATGACGACGATGATGACGATGAAGACGGTGATGACGACGACGATGACGA TGATTATGAGGACAGTGATGGCGACGAGGGGGAATATCACCACATTCTAC ACCATCACAATCGTCATGTCCTTGAACAACAAAATGGGTTGTTGAATGNG GATTCAACATTTCTGCTTCAAGCAATATCGTATTCAGGTAACATCTTATT TACTCTTTATTGCTTAAGCAAAAAGAATAAAATCAGGGTCCAGCTAAGAA AACCACCTCATCCAGACCCACCAGATCGTCCATAAAATATCGCTTTTGAA AATTTTGTTTACAAGGCGGCACTCAAGAAGTAGAGGGCAAGTCTGAATAT AGCACAACGAGGGTTAATATAGTTTGTGTCTAGCAGGCTCTGTCCCGTAC AACTGTCTACTTTCAACCGTTCATTTTTCTTCTCTTCTTTAGCAATGGTA AATTGGACCCTTGGTCAGGATACGGTGTTTTGAAATCTCCATCACCCTCC ATCGTCACCGTTTTCATTGAAGATGGAGCGCATCATTTGGATTTGAGATC TGCTAATGACCTCGACCCTCAATCTGTTATCGATGCCAGGAATATCCATA AACAAAATATCGAGAAATGGATCCACGAATATCAAAAACAACATTAAAGA TTATTGCTATGTTTTTGTTATAATGGGAAAAGGTAACAGGAAAGGCAAAT GTATATAGGTAGGATTATTTTTGATTACATAGGTGCGCACATTTTTGAAT CCCTGATGTCTCATAAGCCTACTAGGTTTTATTTGCCAGCTTGAATATCT AGATTAGCTAAGTGTTTTCTTTAATAGGGATATGAAACCTTTTACTTTTA ACGGATTGGAAATTGAATCTGCTCATTAAAATCTAGGATTTTTTCCGACT GCCGAGTCTAGTTTAGCTTATTCCAACTGAATTTTAAAGTATTTTCTATC ACTGGTGAAGATCTTTAGGCTCTGGCTAGGGGAGAAAAATGGGTCATACA GGGGTCTACTTTTAATTCACTGCATATGATTTTGTATAGTATGCTTAAAC TTCACTGCACTGTGTAATTACGTACAATTTCTTTGGTTTTATTTATTTCC AATATTTTGGTCAATATTTTTTTTGTTTTCATCATTTTATGCACTTCTTC TCGTTTGATACTTACTAATATTGTTGAAAATTGTTTAAAAAAATTTTGTA AAAATTTTATAAGTATATATCATTTTTTGTACGAAATAATAAATTAAATT GCATTTGAAACTTTGACCTGGTTTTACATTTTGATTCACTTATGTACCAA CATCAGGAGATGCCGCACATAGTATTTTAAAGCAACAAGTTTACTAGCAT ATTCCTTTTATAATGTTCATGCTTTTATAGACCATAAAGAATTTCCTCCT TTTAATTTCAATATTTTGATAGCAATGTGAAACATGTTTTCAAACAATTG TTCACCAAACCATTCCAATAAACACAGCGTTTTAAATTTCCTTTAAAAAA AAGATTCTCAAAATGTGTTCACAACAACATTAATTTTTCGAACGTTTTCT TTTGAGTAAACAAAAATAATTAACGAAAAGAAAGTAAATTTGAAATCGAA TTTATTAATTTCTTTTATTGTAATGAGACAATGAATTCCATTTGTTTGTT TTGTGGATTACTTCTTATAGCATGTTGTTGGTCATCACCAGTTGAAGCCA GAGGAAGAAATTACAGGAGGAATTTTGAAGTTGGAGACCAAGGAGTGTTT ATCGATTATGACTATCCGCAGAGTCCGTTGTCGCATATCTCACCAATAGC TCCGGTAAATGGTTTTATCTGCTGGGTACTCTTAGATGCCTAACTTAGGG GAAGGAGCAATTTACAAAAGTTTTGTTAAACGTTAGGGCCTAATTGCAAG GGACTTTTACTCCTAAAGAGTACCAAGATAGTTAATTAAGGGTTATTTGG TAAATAGTTTCTAAAAGCTTGAAATTCTTTCAAAACTCAGTGTTCCTTGA CAGGTTAAATTCATACCAAGGATATATTTCAATCTCTCATACAATGGCTG CGGATATAAATACGTTTATTTTTCCTGTCTTTTAAATCCTTCCCATTTTC AGTTATTTTATGGTTCAATAATTAGTAATTTGACCTTTTCCACCTTATTT TTACCAGGGCGATCCACACTACCATGGATTTCTTCCACCGCATCACCCAC ACCATGATTACGACTATGATGACGACGATGATGACGATGAAGACGGTGAT GACGACGACGATGACGATGATTATGAGGACAGTGATGGCGACGAGGGGGA ATATCACCACATTCTACACCATCACAATCGTCATGTCCTTGAACAACAAA ATGGGTTGTTGAATGAACTTGATCGTCGAGCACATCTCAATGAAATATTA CTCAAAAATCGGGTGGCCAACGAGAGATTACATCAGTTGAATTTAGACTT GAATACACATGCACTTGCTGATCGCATAGCAAGCTTCCATAATGATAACA ATCAAGAATTAGCAATGAAGTTGGCAATGTTAGCAGGACACCATCCTTAT CATGAGACATCACACAGTCAACTAGATATCGGTCCAAATAGTGCTGCACC TTATCTGCAACCACTGGCAGCATTTCACCACGACCAAAGTCACGCATTAG CTGCCAAACTAGCAATGTTGGATCACTATCATCCTTTCCAAGCACCTCTC ATTCACGATCACGTCAACGTTGGTCCTGGCCACTCTCCACCTTATTTACA ATCGAACTTCGAAGTGACACCAGGGTATAATTTGAACGAATATGGTGACG TTCCAGGATATCGGAAACAGAAAATAGATGAAGCAGCCAATCTTCATGAG CATCTACACAACTCTGAGATCATGATGCATGCTGAGTTGCACGGTCCAGT GCATGTTGACGCTGACGAAGAAGCAGTAGAGAACGGAGAAGAGTTGGGAC ATCCTGAGGAGCCAGACAAACCTCCACATCTTCATCCACCAGCAGTTCTG GGAGGAATGGATTTCGGTGGCTTGGATCCTGTTGAAATCGCCAACAAAGC AACTTACACTTTATCTCCTTTAGCTAAACAAATCAGTGACGCAGCAACTA AAACAACAGCTGAACACTTAGCTGGGAAATTCTCAGCTATGGATGATAAA TTAATGAACTTGGTTAATCGACCAAATCTGTTTGAAGGCGATCCAAAAGC AGTCATGGGTATCGGTAGATCTCACCATCACCACCATCACACACATGACG AAAACCCAACCTCTACTCAAAGGAAGGAGGAATTACCTAGCAGTCCTTCA CTAAACGATTTAAGTCCTCAGCCATCCAAGCCACAAAACGCAGACCAGCG AACCAGAGTGACCAACAAAAATAATGAACATCCAATAAAGAACACGACCA TGCCAAGAAATGCAAATGACGTTGGACTAAGAAAAAACTCCACTCATTCT GAACTTAGAAACCACCTAAAACCAGTGAATATAGATAGAACTGCTGAGTT AACAAAACCTATTTCTTCGAAAAATTCAACCAAACCAGAAGCGAGCTTAA ATACTGAGAGTAAGAAATCTTCAACAGACTCGACCAAAGTCTTTACTGGA ACGACACAATCTTCAAAGAATTCAACAAATGAAGATAGAATTCCAATCAC CAGGAATTCAAACAGAAATCTATCAAAACGTCACAAAGGTTTTATAGCAT GGAACTTGGTAAATGCAAATACTAGAACCATCACGAATAGTTTCAACAGT GAAGAATCATCTTCGATGAAAAATCATTCAGTCAACAACACAATCCACAA GAAGCACATTGTAGACCACACACAAAACAAAAGAGGTGAAATCACTCCAG AAACATTTCAAGGTTCAATGCATACTATGGAAAACTTCATCGACGCGCTC GCAGCAAAACCAACTCAACCCCGAAGCAAAACTCAACATTCAAAGAAGAA AAATTACATCAGGGTTTCCAAGAACCACATAAAGACATTGAATAGAACGG AAAGAGGACAGGTAAAAGAGCACGTTCAAAAACCATTGCACGATCTTACC ATCCATGTTTCCTTTGGGGAGGAAGATAAAACATCGCTCAGCAATGGGTC AGTATCTAATCTCACCACAGTATCTAACGAAGAAAAACCATCCCACGATA ACCCCTCAGGTTCAGTGTCCGAAATGTTACCTCATCATCAGCATGCTTCG AACAACCAGACAACAACGTCATTGCACAAAAATGATGACAAAGCACATTC TTCTATTGATATGCGCAGTAAGACCACTGAGAGCTCATTTCGACGAACAG TTCCAACTCAAAAGCAACACGAGGAAAATATAAAAGAACAACCAGGACAA ATTTCCAATCATCTAACACAGACAACAAACAACACATTACACAGCCAACA GAATAAACCAACCAGGAAAAGTCCTTCGCATTCCGACGTACTGGAAAATC ACCATCTAATCAAGGATTCTAAAAATCCAATAACCCTTGATAACAATCAA GACTTGAACTACAACATAAATGGACACAAGCACAGCATTTCTTTAGAAAT TCAACGAAAATATATTGCTTATAAAAACATGGTTAAACTTTTAAAAGGAC AAAGTAAATCTACCTCATCAATTGGTCCTTATGGTAACGACACAAACTCT TTCGATTCAAAATCAAGTGAGCTTGAGGCAAGAAACTCACAGAAAGCTAT AAATAAGATTACCAGCAATATCAAAGAAAAAAAGACTGATTCAAAAAGTC AGGAGAAGTCGTCGGAAGGTCGCAGTGTCGCTCACAATACAGAAAATGTC CCCTTAGCTATTCCGATCAAGAAAATGCCAGGAAATCCAGTGCCAACAGC TGATAATACCAAAGTCTCAGCATCGTTTGAAAACCACCCAACAGAATCAC AAATTCACCATGCTGAATTGGTCACTCAAAACAATAAAAATTTGATTGAG AATAAGAAAATAAAAGAACAATCGACTAAACCTTCATCTAAATCTCTGAA TAATGAACTAGCTGAAGCCACAAAAAATTTACTTCAAAGTGAACTTATTG TCAGTGACAATAAGGAAACCAAAAGAAACAGCTCCCATATTTCAGCCCAG AAAATGTCCAAGAAACCATCTAAGAATGTACACAAGGACGTCAAAGAGCC TTCACCAACGATTCACGTCCTTGCCATGGAAAGGGAATTAAAAGACTTGA AAGGAGAAATCGAATCTCGATATTCGAAGTATAGAAAAATTCGTGATAAA CTAATGAAGGATAAGAAAGTGTTTTTATTCAAACCTGATGATGTTGATAT GACTGTATTAACTGAGCTGTCCGAAAAACAAACATTGTCCGATAAAACAA CTGATAATGACACAGTAAACAAAGATATTAGAGTAAATAAAGAATTCGTT TCTGATCGCCGTACAGATAAAAGTTCAATGGTAGACATTAAGAAAAATAC CCAGACCGGATTAAGTCAAAAGAAAAACTTACACGGCATTGTAAAGACTT TAAGGAAAGATTATAAATCAACGCCCACAAATTCCTGGCATATTCAGTTA CAATAGGGAATTTTCTTAATATAATCTTTATAAATTTCTTGTATGTATGA TTATCCCTGTAAATATCAGATTTCACTTTAAAAGAGACATTAATTCCTTC A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042149XLOC_042149Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067491-exon-scaffold_47-1575043694:325523..325679TCONS_00067491-exon-scaffold_47-1575043694:325523..325679Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:325245..325385TCONS_00067491-exon-scaffold_47-1575043694:325245..325385Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:324943..325044TCONS_00067491-exon-scaffold_47-1575043694:324943..325044Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:324699..324773TCONS_00067491-exon-scaffold_47-1575043694:324699..324773Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:324462..324519TCONS_00067491-exon-scaffold_47-1575043694:324462..324519Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:324283..324331TCONS_00067491-exon-scaffold_47-1575043694:324283..324331Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:324063..324117TCONS_00067491-exon-scaffold_47-1575043694:324063..324117Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:323634..323739TCONS_00067491-exon-scaffold_47-1575043694:323634..323739Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:323282..323398TCONS_00067491-exon-scaffold_47-1575043694:323282..323398Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:323111..323166TCONS_00067491-exon-scaffold_47-1575043694:323111..323166Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:322263..322424TCONS_00067491-exon-scaffold_47-1575043694:322263..322424Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:321935..322000TCONS_00067491-exon-scaffold_47-1575043694:321935..322000Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:321510..321631TCONS_00067491-exon-scaffold_47-1575043694:321510..321631Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:318798..319037TCONS_00067491-exon-scaffold_47-1575043694:318798..319037Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:317676..317809TCONS_00067491-exon-scaffold_47-1575043694:317676..317809Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1575043694:313829..317322TCONS_00067491-exon-scaffold_47-1575043694:313829..317322Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:325523..325679TCONS_00067491-exon-scaffold_47-1510915933:325523..325679Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:325245..325385TCONS_00067491-exon-scaffold_47-1510915933:325245..325385Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:324943..325044TCONS_00067491-exon-scaffold_47-1510915933:324943..325044Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:324699..324773TCONS_00067491-exon-scaffold_47-1510915933:324699..324773Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:324462..324519TCONS_00067491-exon-scaffold_47-1510915933:324462..324519Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:324283..324331TCONS_00067491-exon-scaffold_47-1510915933:324283..324331Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:324063..324117TCONS_00067491-exon-scaffold_47-1510915933:324063..324117Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:323634..323739TCONS_00067491-exon-scaffold_47-1510915933:323634..323739Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:323282..323398TCONS_00067491-exon-scaffold_47-1510915933:323282..323398Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:323111..323166TCONS_00067491-exon-scaffold_47-1510915933:323111..323166Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:322263..322424TCONS_00067491-exon-scaffold_47-1510915933:322263..322424Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:321935..322000TCONS_00067491-exon-scaffold_47-1510915933:321935..322000Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:321510..321631TCONS_00067491-exon-scaffold_47-1510915933:321510..321631Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:318798..319037TCONS_00067491-exon-scaffold_47-1510915933:318798..319037Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:317676..317809TCONS_00067491-exon-scaffold_47-1510915933:317676..317809Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1510915933:313829..317322TCONS_00067491-exon-scaffold_47-1510915933:313829..317322Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:325523..325679TCONS_00067491-exon-scaffold_47-1491911889:325523..325679Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:325245..325385TCONS_00067491-exon-scaffold_47-1491911889:325245..325385Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:324943..325044TCONS_00067491-exon-scaffold_47-1491911889:324943..325044Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:324699..324773TCONS_00067491-exon-scaffold_47-1491911889:324699..324773Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:324462..324519TCONS_00067491-exon-scaffold_47-1491911889:324462..324519Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:324283..324331TCONS_00067491-exon-scaffold_47-1491911889:324283..324331Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:324063..324117TCONS_00067491-exon-scaffold_47-1491911889:324063..324117Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:323634..323739TCONS_00067491-exon-scaffold_47-1491911889:323634..323739Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:323282..323398TCONS_00067491-exon-scaffold_47-1491911889:323282..323398Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:323111..323166TCONS_00067491-exon-scaffold_47-1491911889:323111..323166Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:322263..322424TCONS_00067491-exon-scaffold_47-1491911889:322263..322424Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:321935..322000TCONS_00067491-exon-scaffold_47-1491911889:321935..322000Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:321510..321631TCONS_00067491-exon-scaffold_47-1491911889:321510..321631Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:318798..319037TCONS_00067491-exon-scaffold_47-1491911889:318798..319037Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:317676..317809TCONS_00067491-exon-scaffold_47-1491911889:317676..317809Clytia hemisphaericaexon
TCONS_00067491-exon-scaffold_47-1491911889:313829..317322TCONS_00067491-exon-scaffold_47-1491911889:313829..317322Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:313829..325679 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01846 0 0 0.00639069 0.194179 0.180251 2.4475 2.64146 0.255933 0.402715 1.5018 0.840104 1.26747 1.72701 0.681884 3.13237 0.934106 0.744007 0.0441965 0.0353364 0.461278 0.586874 0.390969 0.636902 0.916767 0.820984 0.0937212 0.0647611 0.0411677 0.0114262
Blast
BLAST of TCONS_00067491 vs. Swiss-Prot (Human)
Match: PCP (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1)

HSP 1 Score: 506.523 bits (1303), Expect = 3.340e-162
Identity = 241/453 (53.20%), Postives = 317/453 (69.98%), Query Frame = 2
Query:  128 QYKEMWYAQTLDHFNFLTTDRQFSQRYLVSDTYYKP-GGPVFFYTGNEGDIAWFCNNTGFMWDIAPEFNALLVFAEHRYYGKSLPFGKDSYKDAVHLGYLSSEQALADFATLITHIRKTMPSVANSPFISFGGSYGGMLAAWFRMKYPASVAGAISASAPILAFPEMNDCELFYKIATDDFKLAGGDVCAAQIRKSWNTIVSLGQTAIGRSQLQSMFQLCKPLKDINDVYMLNIWLSEAWVNLAMVDYPYPASFLEPLPSWPIKEVCKHLQE-DATGVTLIKNIVGAANVYANFTGQTKCLDINQQATGNLGDQGWDFQACTEMAMPLCQDGIRDMWLPAEWNFDAFAKGCETQWGVTTRKYWTQSVYGGFNISASSNIVFSNGKLDPWSGYGVLKSPSPSIVTVFIEDGAHHLDLRSANDLDPQSVIDARNIHKQNIEKWIHEY----QKQH 1468
             Y  +++ Q +DHF F  T + F+QRYLV+D Y+K  GG + FYTGNEGDI WFCNNTGFMWD+A E  A+LVFAEHRYYG+SLPFG +S+KD+ HL +L+SEQALADFA LI H+++T+P   N P I+ GGSYGGMLAAWFRMKYP  V GA++ASAPI  F ++  C +F KI T DF+ +G   C+  I +SW+ I  L  T  G   L     LC PL    D+  L  W+SE WVNLAMVDYPY ++FL+PLP+WPIK VC++L+  + +   L++NI  A NVY N++GQ KCL+I++ AT +LG  GW +QACTE+ MP C +G+ DM+ P  WN    +  C  QWGV  R  W  ++YGG NIS+ +NIVFSNG+LDPWSG GV K  + ++V V I +GAHHLDLR+ N LDP SV+ AR++  ++++ WI ++     KQH
Sbjct:   47 NYSVLYFQQKVDHFGF-NTVKTFNQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSGPH-CSESIHRSWDAINRLSNTGSGLQWLTGALHLCSPLTS-QDIQHLKDWISETWVNLAMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCLNISETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWGVRPRPSWITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLDLRTKNALDPMSVLLARSLEVRHMKNWIRDFYDSAGKQH 496          
The following BLAST results are available for this feature:
BLAST of TCONS_00067491 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCP3.340e-16253.20Lysosomal Pro-X carboxypeptidase OS=Homo sapiens G... [more]
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