TCONS_00067473 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067473
Unique NameTCONS_00067473
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1737

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067473 ID=TCONS_00067473|Name=TCONS_00067473|organism=Clytia hemisphaerica|type=transcript|length=1737bp
TTTCGGTGCTTTCATATTTTGTTACATTGTTTTCGTTTTGTGTTGCTTTC
TTTCGATGAAAATGCGGTATCTGGTTCATTCCCTTGCTCAAAATGGAATG
ATCGGTTTGCCACGGAAGTTTCCGTCACCAGAGAAAGATGAAGATCTAGA
TGACGAAGAAGAAGCGTCTTGTGAAGAACTCGTTGTCACTGGTATCCCTT
TCGCCAGTCACAAACATGCTGTCGGCTCATTGAATCCAGCTTTGGGAAAC
ATCGAAGTTCGACGCTGTAACTTTGTCATCAACCACGAGGGACGCTTCAA
AGTGTTATGGGATTGGATCGTCTTAGTGTTGGTCATCTTTACCGCTATCC
AGATTCCATACTATGCTGCATTCTCTAATAATGTCAACAACATTGTCCTT
GATGTAGTTAAGAACAATGAAGTCCGACCCATGTTGATTCTCAGCTTAAT
CGTGGACTGTATGTTCGTGTTGGACATCTTCCTAAATTTCCGAACCACCT
ACATTCAATCAAGTTCGGACGTGTTGGAGAAGAACCCTAAGAAATTAGCC
ATACATTACCTGAGAACATGGTTTATAATTGATCTACTGGCGGCCATTCC
GTTCGACTGGATCATGCATCAAAGAAGTTATGGTGGAAATACATCAACAT
TGGTGGGTTTACTAAAAAGCGCACGTTTGTTGCGTTTATTCCGCGTCGCT
AGAAGACTGGATCGATATTCGGAGTATGGTTTAGCTGTCCTTTTTCTTTT
GATGTGTTTGTTTACACTGATCGCTCATTGGTTAGCTTGTATTTGGAACG
GAATCTCTTTAATCGAGGAAGGCAACCAAAACAGTTGGGTTCATCGTATG
GATGATATCTTATACCCTAAGAACGTTACAAGGTTGCTAACCAACAATAC
CCTCAACGGTACTTTGAGCAGATTATCCATTAATGTGATAAGGATGACGC
AATCACAGCGTTACATTGCGTCCATGTATTACATTGTATCTTCATTGACC
AGTGTAGGGTTTGGCAACATTGCAGCAACTACTGAATTGGAACAGATGTT
TAGCATCATTACAATGTTACTTGGAGCGCTTATGTACGCATGTATTTTTG
GTAACATGGTAGCAATCGTTCAGCGTTTATATTCGAAAGCATCCACCTTT
CACACGCAAATGAACACAATACGAGAGTTcatgaaattttacaaaatacc
CGAGGAATTACGACAATCTATCAATAATTACGTGCGAAGAGAATGGGCCG
TCACGCAAGGCATTGATGCCGAAACGGTATTATCAAGATTCCCAGAATGT
ATCCAAGCAGATTTGACGTACGAACTCTATCAAAACACATTTCACAGCGT
CAAGCCGTTTCGTGAAGCAACCGTCAGCTGCAtgagagctatggccatga
agtTTAAAACGATGACATTACAGGCTGGTAATTTTGTGGTTCGCCAGGGT
GAAGAAATAAATCGGTTGTATATTGTCGGTAAAGGATCATTGGAAGTTTT
ACATGAAGGAAATCTCATCTTATATTTGACACGGAATTCAACATTCGGTT
ACGATTTCAAACTATGTCACCACAAGCCGAAAGCGAAAGCCAATATACGT
GCGGCAAACTTGGTGGAAATTCATTACATACACGTGACAGACTTTCTGGA
AATCATGGAATGTTATCCAAAGTTTTTCGAACAATTTAAAGAGAATTATA
AACACACATATGATGTCAATGATCCAAATGAGGTGAG
Run BLAST on NCBI

transcript from alignment at scaffold_47:228291..243113-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067473 ID=TCONS_00067473|Name=TCONS_00067473|organism=Clytia hemisphaerica|type=transcript|length=14823bp|location=Sequence derived from alignment at scaffold_47:228291..243113- (Clytia hemisphaerica)
TTTCGGTGCTTTCATATTTTGTTACATTGTTTTCGTTTTGTGTTGCTTTC
TTTCGATGAAAATGCGGTATCTGGTTCATTCCCTTGCTCAAAATGTAAGT
CACTTTTTCTACCCGTACATCTCACAGGAAAAAATTTTCGATTTCCAAGG
TTGGAAAATCAATCAATATTTTTGGGTTGGAAATTTTGGTTTTTTAATTG
AAGGTTGGAAATTTGAGCGATTACCTTAAGCTGATTTGGAAAATGTAAAT
TACCCATAGGTTTTGTAGAATAAATGCCCTTGAAAATCAAGTTAAAAAAA
ACCATGTAGAAATGACAATTTTCCAAGGCTGGTTGGAAAACATGACTTTT
TGGGTGGGAAATTTTATTTTCCAAAAACAGTTTGGGAATTGAAAAAAAAA
GGTCAAAAATCGATGTGAAAATACATATTTGTATATTTGATACCTCAAGT
TGAAAAACTAGACTTTTTGGGTCGGAAATTTGTGTTTCTCCCAAACAGTT
TGGAAAACGTTAAAAATCCATGTGGAAATTACATTTTTCTAAGATTGAGT
CCCTTTCTTGGAAAACTAGACTTTTTGGGTCGGAAATTTGTGTTTCTCCA
AACAGTTTGGAAAACGTTAAAAATCCATGTGGAAATTACATTTTTCTAAG
ATTGAGTCCCTTTCTTGGAAAACTAGACTTTTTGGGTTGGAAATTTGTGT
TTCTCCAAACAGTTTGGAAAACGTTAAAAATCCATGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAC
GTTAAAAATCCATGTGGAAATTACATTTTTGTGAAATTGAAACTCTTTCG
ATTGGAAAACTAGACTTTTTGGGTTGGAAATTTGTGTTTTTCCAAACTTT
TTTCTAACCATTTTCTGCGCATGTTTTTGGGAAAACCACAAGCGATTTTT
CGCTCAAAACTGTTTTGATGTATAGCTAACCTAAATATTAGGCTATGTGA
GCAGTCAAGCTGTAAGTTTCCGTCAGGTGAGGCGTCTCTTCGGAGCGGCC
TCGGTCAATCCCAGTGAGTTCGCACAGTGAAGCACATAGGGTACTTGTGT
CATAGTTTCAAATAGTACCCTGCTGAGCTGTGTGAGTGATCTAAGATCAA
CCACGTATCTGTGCGAACAATAACGAGAGATTGACCGGGAGCCATCGAGC
CTAGGCTAGCGAGTGACTGTTCACAAAAACAAAGACCTTGTTTAAGATCT
CTGCCATCACTTTTTGGATTTTGGCTTTTTTCAACCTGATATTTTCGAAA
TTTCCAACCTTGTTTAGCTTGGATTTTGGCTTTTTTCCAACTGAATTTAC
AAAAATTCCAACCTTGTATTTCGGTTTTTTTCAACCTAGATTTTCTAAAA
TTCCAACCTTGTTTAAGCTTGGATTTTGGCTTTTTTCCAACTGAATTTTA
AAAAATTCCAACCTTGTTAAATTTAAATTTTGGCTTTTTTCAACCTGGAT
TTACGAAAATTCCAACCTTGTTAAATTTGGATTTTTGCTTTTTTCAACCT
GGATTTGCGAAAATTCCAAGCCATGGAAAATGCAAAATTTCCAACCTTGG
AGAATGTCCCACATTTTCAGGTTGGATTTTCCATTGGATTTTATCTTTTC
TCCAACTAAGAAAACTTGAAATTTCCAACCTTGGAAATCGAAAATTTTTT
CCTGTGTCTTGCACTTGAAACCAAGATAAATCGAAAACAAAATCGCTGTT
CAACTCATGTTATCACGACATTTAACTTCTTTAACTCATACTATTGCAAC
ATCCAGTAATCCAAAACCATTTTTACAATGACACTGAAGCCAACCATATT
ACAATCATATCAAATTCATTATAACCATCTACCCTTATTGGGGCCCCTTA
TTACTTACTCGCAAAATTTTAATAATTTTGCAATGGGAAGTACCACCAAG
GCACCAAAACTCTTCCTCCAATGCCTGCTCATTCAAATTATCGGAAAGAC
TTATAATCTCAGATAGATTGTTTAAATGATAACTGTCAAACCCTGTTAAG
TCTCTTTCATTGGAACAGTTCCACCTAATTTNCATTCAAATTATCGGAAT
AACTTATAATCTCAGATAGATTGTTTAAATGATAACTGTCAATAGATAGA
AATAATTGCTGTGTTAACAATATTTCTTATGCAGGAGATTTGTACCCATT
AATAATATTTGGTTTTATTGTAACACTGGTCCCAGTAATCGTTTCTTTTA
TATTGGACCAATAAGAGTCTACTTCGTCGTGTTTTTATGTTTTGAAGGAG
AAACACAATATTTTTGCAGAATTGTTAGACCCCCTAGGCTGATTTTCAAA
ACCATTTTTCCGGCTAGTTTATTATAAGGGTTGAATGGACTATATTTTTG
AAAATATAACAAAAATATGTCTTTTTTATGTGATAATATTTTTGGATTTC
TTTCTTGTGAGAACAGTACGTCTATTATAGTATTGGAGCTGCACCGTATG
GTAGATATGTTATGTTTTTGAAAGAAAATCTAAACAGGTTCTTTCAGCTT
GGGATAATAAACTGAAGATCTATCTCATCCACAGTTCTTCAATTCTTTTA
TGAGGACTGATGAAGTGTCACTGTTGTTACCTGTGAAGCAACCAAGCGAT
TATTTATTTCGACTCTCTCTTTTTTATTTAGTCCTAATTTTTTTCATGAC
TTTCTTGTGAGTTAAGAAGAATTCTTTATTTCACCAGTGGAAACTCGCAA
AACATAGAAAATTGAGACGATTTAAAGTGAAAATAGTTTTGGTTGTCTAC
CTTGCTAAACGATAATCTTTAAGTCCTGAACGCTTAAAACCGGTTTTCGA
TTACAAGAAGAAAAGAGGAGAGTAAAAAGATATTAACCTTTTGATAAGAG
TTGGGATTAGATGTTGGATTTAACTTTCAAAACGATGATTCTATTCATGT
AAACTCCTCAACTGATCGAAGAAGGAATAACCATCCTGTTCTTTTGATAC
GTAGATCTTCTCAATATATTCTTTTCAATAAAGATCGATAGTAGACAATT
TTTCAGGGCATTTTATTTGGAATAAGAATTATTCAATAAATTTGTTACAA
ACGCTTATAAGTATTTAAATACTTTGGATTTCACAATCATCGACAACGTC
GGACACAGGGTATTAATCGAGATGGGACAAAATACTTCTTTTTTACCAGT
CGAAGATGTGGATCAAGAGGATGCGTGCTTGGCGCCCGAAATTGCAAAGG
TAAAAAACTGATAGGATTTATATTTATGTATTTTGCACACTGACTCCAAT
CATAGTCAACTACTCCCACAAACGCTACCATCATCTTCTGCCACCAAAGT
CACCAACAATGGATGAGGATCAACCCAGTGATGTATCATCCATTGACATA
ACATCGACCCCACCAAAATGTACAGCTGCAAATTGCTTCGTTCAAGACGC
TGATTCTATGATTTGATACAACTTTACACTTAACCCCGGGGGGGGGGGGT
ACTAGGGTTGCGAGCTGACGGGGGGCACTTAACATTTGAGATAAATGTCA
CAAGAACTTAAAATGTTTAAAGGAACCGATTCAGTTGTCAGGCTTTGTCT
ATCCATCTATTAAACGAATCTTGAATCAAAATACCTGTAAGCTTTTGACT
ATACTCGGAATACTGAGACTGAGACTTTCTCCTAAATCTTGAGCACAATA
CGTAATAGACTCATTATTTATTAGTTTTTACGCGAATTTGAAAACGTATT
AGCGCTTTAATTTGATATGTTTTGATATGAGATTTCCTGGAATAGAATGA
AGTTGAGGAAGGAAACAATCTTTCAAAAACTTTTTTCTTAACTTTTTTTA
TTGTAANCTGGAATAGAATGAAGTTGAGGAAGGAAACAATCTTTCAAAAA
CTTTTTTTATTGTAAATGAAGCCAAATACATTGTCTTTGGGAATAAAATC
TATTGAAGAAGTTCGAAGACAAAATATAATCCCGTTTGAATAGAAAGATA
AGTTAAAGAGTTTTGTTACGTTACACTTTTTTTCGGACGTTGAACTTTCA
AAGCTTCTTTTAGTTCTGTTAGTTTCCGACAACTCCATGTTTGTCCAATA
AAATGTGGTCGTTTCCAAAGGTAACGATGATGCTGTAATGCAAATAGTAG
TCGAAAAACAATTTCTCAATAATTTGGTATCATTAATCATACAAAAGATA
ATATGGAAGACTTTGATATAATATTTTTCGATAGTTTATCGCTTACGTTA
AGTGGCTGTAGTCTGTAATAGAGTATATTATCTTATGGTGAGTATATTTG
ATAGGCACTTTAGAACTAGGTACAGTAGTCTACCAATGTGGAGATTTAGT
TCTTATTTTACAAGGTTTTAATAACGCTCAAAGAGTACCCTTTTTGACGT
CTTTTCGGAATTTTTCAATCAGCTTTAATTCTACTGAACCAAATTCAAAA
AGTTACGCAGCAAATTTTAAGTTTAACTTTTCTCCTTTTTAATGAAATCA
TAAAAGAGAAATTTCGTAAAAATTCATATTATTACTGACACAGTAGCAAT
CAAACTCTTATACGATTTCATTGGTCACCTGGTAAAAAACCTTACGGCGC
TTGATACAAGATAGTGTCCACATCAAGGTAATGTACCTTACTGACAGTAA
GAGTAGTAAGAAAACTTTGGGAACTTAACTGGTGAAGAATGAGGGTTTGT
TTGCTTACGATAGCAGATTGAAAAGGGTAATCTGACCCACCTCTCAGAGA
CGCCTTCTTAAGTGATTTCATTCCCCAATTTTCTAAAAAAGTGGGATAAA
TTATAAAAAGAGTGAGGTGAAACAGTTTGAATGACAAAAAAGCACTTCCC
TTACTAACACTTTTTGTTAATCTCAATTTGCAATCGGATTGAGCTTTGAT
TTTTCGTCCCTAAAGCACACACAGGGAGAAGGACAGCCCTCTGATTCACT
CCTCCTTGGGCGACACCTGCTTCTTATACTTTCTTGATATGATATAACGT
GTTGAGAAACCTTCATTATTTTTCTGATGGAAAGAAAAACTGAAGTTGAT
GTCTTTTTGATGACGTGCTTTTCAAATTTTCTTTCGCGATCAACTGCATA
TGGTCATGTTCCCTTCAAGTTGCTTTGAAATTTTCTGTTTGGAATGAACA
AGAACGCCGGAGTGTTCTATTCAAAGCAAGCGCAAGTCATGGGTATTTTA
TTCATCAAAGTAAGAATATTTTAGTAATTATGGTATTCAGCTCTTGTGGG
ACCTTCCTGCGGGCTTTTTTAACGCAGCATGCTAAAATCATTCACGAGGG
GATTTGAATAAATGGACTATTCATAAAAAATTACTTTTTAATCAAAATTT
TTGCATCATTTTTAATTCTACGCACTCAGAGTGTAACCTTAAAATTAAAA
TCTTTGACAGAAAGAAATTTTCACCAATTAACTAAATTCGCTGAAATTTC
TTCGCGTTAATTTAAAAAATTTTTGTTAGGCTAAATTGCGCGAAAATTGT
TAGATAAATATTCATTTATTAGTGGAGGATAGAAACTAGTGCGAAGAAAA
TTCAAATTTAGCTTTCGGTTTACTCATGCTTGGCATTGTCCCGCTAATTT
CACTCTATTGTAAAAATTATTCCTACTGAAATTAAACTCGTTTTATTGAA
GAAAGGAAGCAATCTTTACGGAAAGTCTCAAAAACGGGTCAGAGAATGTG
AAATTTTCAGACAGTCTAGCATCATATGTTTATTGTCATTTATTTTTACA
CATTTTGAACTACCGGGTCAATGGAAAGGTTATTATTTTGACTGTGAGTG
AGTAGAAGGTCAACTGACGCACAACTTTATGCGTTGATACTTGACGAAAA
TTTTTCATTTCAAAACTGCAGTGTTTAGTATGATTCGCAAGGTAAGATAT
TTTGTTTTTTTATCTTCTGATAATCTAAAGGGTTTGAAAAGGTATAAATT
TTTCGGATTAACTTCCATTGATCATGTATGGATTAACACAGATGATTTGA
ACATTTCATTATTTTTTTAATGGGTGATTTTTACCGTCAACTATTTTTGG
ACGAACTATCTTACCGATTCTTTAAAATGAATTAAAAAACAAATTAAAAA
ACAATTCTTTCAAGTTTAGAAGGGCTTTGAAAAGTTAATTTAGTTTTTTA
ACAATTTTGCGAAGCTTTCTTTGAACTAGAAATCATAAAAGAAACTTTCT
TTGGTTCTAAGGATGTACTTAGAGAGAAAGATATGACTAATTCAAAATAT
CGTGGCTATTTTCTAATGTATTTTCCATGTGGATGAATTTTTATCCATTA
AAGGGAAAATAGGAAGATTATTCGTTTCCATCTCACTCACTCCACAAACA
CAAACTTCCTGTTCAGGACAAAAAAAGGAAAAAGTACAGTCCTGTCAAAT
TAGAAAATAGTGGTGAAAGTAGGATATCAAGCGCGGTTGGATACTTTACC
GAACACTCAAGCAGATGGAGTGTCTTGTATTTCCAAAAAAAATCACGTCT
TGAAAGCGAACCTAAACACTCCTCCTTCTTTCATTGTGCTTTCCTGGAGG
TGGTTTGCTTGACAATAGCAATAGCAAAGACTTTCGATCCAAAAAAAGAA
GATTTTTTTTCGAAGATTTTTTTCCTTTTTCTCCTTATTTCTTCGGATTA
TAAGTACCATCGTGTTTTTAATTTCTCTGTTTCCCTTGAAATAACATAAA
ATACTCAGTCAAAATATCCACGCAGATTTTTTCCCTTGTACTTTTTAAAG
AATTTTCTGATGAAGCAAGAAAAAGAAGTAAAGAATCTATTTCGTCATAA
AATTATTTTGTCCCCTTTTTCGTAGATGTTTCTATAACCTTGAAACAGAC
TATGAGACCAGCAAATTCACTTGTTTAACATTGACAAACAATGTTGTCAA
CACTTACTGTAAAAATCAGAGTTGTATTAGGTGGCAAAGTAGAATAGGGC
AATGAAGTGGTTTGCCGTTAAAAAAAAATCAAAAAAATGTAATTTTTTAG
TATTTGTTATCCATTAGCCTAAACTGTAGCCTCACATATCAGTATAGTTC
ATGAGACAGGAGATAGTTTTTAAGTGAATCCTAGCAGAAGGTTGGTTTGT
CAGCTTGTAAATTCACAGATCTAGATATTGTTTGACAGCCGAAACCTTTA
GAAACGATTTTTAGTGATTCCTTTTGAAAGCTCGTTGATGTGGTAAACTA
CGGTCTTCAAACTCAAGTAGAAAAAGGTGTCGGCATATATTTGACTTAAA
GAAACACTCCCTTTTTAACGTGCAAAAGACTTATGCAAAATAAATTTTAG
CCTCGATAACCCCTTTCATTACGTCAAAATCTTTATGGAAATTTAGGACC
GAAGTTTAGGTACTTTCTTTCTATTATAATTTTAAAACTTCATTGAATTT
TCAAAAGCATACAAAGTCATCTAAATAATAAAGATCCCAAACGAGAAAGT
GTTGCTCAAAATGAAAAAAAAACAATTTTTTCAGACTCCTCTTCGGGAGG
TGCTTTTCTGCAAACTTGGATATTTCACAGTCAGTAACAACGAATAAATA
AGTTCAAACTCACAAGAAACGTTTGTCATAAAGATATCTGTTGAAGTCCT
TCTAGTCAAAATATTAAAACCTCGTTCAGACTCAAGAAAAGTTTAACAGA
TAGAAAGAAAAATCGTATTACTAAGAAATAATCTTTTCCACAAAAGTAAA
AATAACCAAAATTTTGATACAAGCCATCTAAGCTGAAAACTAAAAATACA
GTAAATATGTCCATCAGGGTATGACCATTAACCTAAGTCTAATTATGTAA
GAAGTGATAGGTTAAAACAACTAGAGACAGGAGTATTTTTTGAAACAAAG
TAGATACACATCTGTGATGGTTATCTGCTTTGCTTTTTGTGATCTTTTTC
ACTCTTGTTATTGACTTTTTCAATTTTCACATTTGATGATACTTAGGCTA
CTTGTAGAAAAAAGGGGAAAAGAAAAATCGAGAAAAAGGGAATGGTAGTT
TTCAAGAATAGTGATTGTTGCTAAAGAAAAGAGATTTTTGTCAGTTTTTT
TTTAAGATACAAAGTTATGTAAATTTCAAACAAATTAAACACTGTAAGAG
TGGTTGGAATGGTAGATATCTATTTTTCTAGAAACAGGTAGCGTAGTAGG
TTTACCGCCCACGCATGGAATTTTGACATTTGTATTGATTGTTTCTTGGA
AGAGAAAGAGAGCTCGGAAGCAAGATGATTCCCACAGTCACTCATGCTGC
TTTCAAGGTTTTTTTAAAATTTTTAAATGTTTTTTACGGTAAACTATTTT
CCCAATGCAAGATGCATTCTTCTTTATATTGCCCTTCTCACTTTAAAAAC
TTTTATTTCACCCTTCTATCATAATGTCTTTTTTCAAAATTTTTGTCATG
TACAAGATTCTCCCTTTTTTTGTTTCGTAAAAAGTCTTGAATAATTCACA
AAGTGCATGGCGTTGTTGGGGCGTTGTTACAATTTTGGCTGGATCTTTAT
TTCTCTCTTTGTCCAAGAGAAAGAAAACTTTTCTATAGAGAATAATGCAG
TGAGGAATTTAAAAAGTGTTTTGAAAATTATTTATATCTGCCAATGTCAA
ATGAAAAGGTGCCTTATTTTCAAATTAGATATGATTTTGACAAACTTTAT
AAAGTCATACTGTGGTCTACGAACAGCCGTATCAATTTAGAATTTCCTAA
AAGAGAAGCATCGTTTCTACGCATTCAACTAACGAAAGAATTATGTATCG
TTCTTTCCATTACAAAGTTAACTTTAAAAAGGTGATTTCTGTTCTAAAAA
ACTTCAAAGATGGTAGCCAGATATCATGCGATAGTTTTCTCGAGAAAGAA
TTTTTCCTCCCTCTTCTACGTTGTTGTTTGTTAAGATCATTAAAATCCAT
TTTAGATATTTGTTTCATAATTTTTCCCTTTTTTCTTGACTTTCGTTCTT
CAGAAATTTTCATTTTTTCATTAATTAAGTAACTTAGACCAAGTTCATTG
CTTAAACAATCAAACCAACCATTTTCACTTTAGACGAGAGTTTCTTTTGA
TAAAATAGTCGATTTTTAACTGTGTCTCGTCCCTAGTTCCCAAGAGTGAA
CAGTTCGGATCCAACACCTCTGTGTCACATACCCAATGGGACCCCAGCCC
TCTGGAAAATTTGGCAAAAACTTCATCCCCGATGGGAAAATACGCCGGAA
TTTCAGCCCCACTGGGAAAATGGCTTTGATTTTTCGAAATTCAATGTTTA
AAAATTGTACTCCAAAACCATCCCCACTGGACTTTCTAACCTTGAACCTT
TTAACCTAGAATTTTTATCCACCACCTCAGTGGGGTTGTGAGACAGGGGT
GTGATCCAACGCCAATCAATTTTTTTTATAAAAAGTATATTTTAAAGACC
AGTGTACGTTACATGTTTTCTTTTTATAAGCATAACGCTTATAAGCATAC
GAAGGCTCAGATTTGCAAAATTCCTAAGCATAACATGAGCATATATGTCA
GCCTAAAATATTTTTCAAGTGGTCATTTTTATCTGTTTAAAAAGGTTTGG
TAGAGGTCAAGTAAAAAATAAGACATTCCACTACTCGCTAACATTCCACT
GCTCCCAAAATCTGAACAAATTTTTACAACATTTCTGAAATTTAATTAAA
AACTTGGCTCGATGGGGTGAATCATAAGCATGATTCTTAAGCATATAATA
AGCATAAACTATGCCTGGATGCTTTAGGAACTTAAGCATACACGAGCCTG
ACCAAGGGGCATACACTTGCTTATAAAAAAAAAACCTGTATGTGGCTACA
AAGTCCTTTAAGTCTGGGAAAGTTTGGAACGTTTTGACAAAATGAATCAT
CTGTTTATTTGCGTGTTTGCAATCAAAGTTGAAAAAAAAACACAATCCAA
GATTGGAAGAAGCTTTACTCTAGTTTCCTTCTAAATCACAATTTCCTTTG
TGTAAACATCAATACTTACATCAATACTCAAAAAAAGATTATTACGTGTT
CAACAAAATTATTCCGTCTTCAAAGTATACAACCACCGCATCCTTTTCCT
CTAACATCTATTTTTCATCACACTTCAAAAAAGGTCACTCAGTAATTCTT
TTCTTTCTTCGTTCAACTATTTACGGTTCTTAGGTTTAAAGAATTCCTAT
TTCTTAAGATTTTTTGGCCTTTGAAAAATCAGTTAGGACCGTTATGTTGG
TTGCCGTTATGACGGTCATACAAAGACTCAGTGTAAGTATGGTGGATAAG
CTGTGTATGCCTTAACTTCAAATGTTGATTTCTACACTTGGCGGTTTCAG
TGTAGAACTAACCAAAGTTTTATTTTAGGCTATACTTTAAGTTATCATAT
TCTGAAAAATATTCGTCGGCAGAAATTTGACAAGAAAATTAACGGAATCA
TTCGCCGACAAAGATCATTTTTCCGACAATTTTTACCGATAAATCAAAAT
AATCAAAGCCAGATATTCATTGATGTTTTCCATGGCATTAGATTCTTGTA
GGGCTGATTGAGGTGATATTAAATCTAAATACTACAGTGCATTCGAATAA
CTAGACGGGAATGTTAGCTATATGGTTTATACAAACCAAACTTTCAATCT
TCAAAATTATCGAACCTGATCTAATATAACGAGATTGTATTTTCACTTTT
CAGGGAATGATCGGTTTGCCACGGAAGTTTCCGTCACCAGAGAAAGATGA
AGATCTAGATGACGAAGAAGAAGCGTCTTGTGAAGAACTCGTTGTCACTG
GTATCCCTTTCGCCAGTCACAAACATGCTGTAAGTCATTAGTTCATGTTG
CCAACAAGGCTATATTTTTCGTGGAAACTTACCTTACAAAAACTTTCTGT
CTAGATTCTAGCTCATTAGAGATAAATCTGAACTAAGTTTTCAATCCAAA
ATAGATCATGTGAGACCCCTTACCGAAAAATCGTCTCAATTTGAAAAACT
TTTTGTCAAATTACACCTAAGTGTCATCCCTTTGTCGGGGAAGATCAAAA
CTTTGAGGTCCACTGAATTTCTGACATTAACCAATAGATATCAAACTCCC
CACAAGTTAACATAACATTCTCGTCAGCGTAACTCTTTCATGGAAGTAAA
AATTGACCAACGGGTAACTGATGCAAAGGTTTTATGAATCCTTTTTCAAA
GCGTATACCTTATCGGGGAAAAAAATGTCGGAGTTTTATTTAGTCGGGTT
TTTTTTTTCGTCGGAGAAAAATTTCGTCACCTAGAAGCATTTTCGTCACT
TTCCCCCGATCAAAATTTCAGATTCGTCACTTTTATCCGACCAAATCTAC
AATTTAGTCACTTCCACCGCTTCCACCCGACTAAATTGTCCAAATGAAAT
GGTTTGCTTCACTAGCTCAAAAAAAGATCTTGTAATTCGACGTTTAAAGC
ACTAATTTTGGTTGATATAGGTGTAAAAATTTATATTTTAATTTTGGTTG
GTTTTTTTTTTTAAATCGGGTAAAAGTTTTGGTCAGGGATAAAAAAGTCG
GGTAAAAGTTTTGGTCGGGTGATAAAATATCGGGGAAAAAATTCGTCGGG
GGGGAATTTCGTTACCCCCTCAAAATTTTCGTCACTTTCCCCCGACATTT
TTTCCCAGTTGAGGTGTATGGGTTTTTCTTGTATTCAGGTCGGCTCATTG
AATCCAGCTTTGGGAAACATCGAAGTTCGACGCTGTAACTTTGTCATCAA
CCACGAGGGACGCTTCAAAGTGTTATGGGATTGGATCGTCTTAGTGTTGG
TCATCTTTACCGCTATCCAGATTCCATACTATGCTGCATTCTCTAATAAT
GTCAACAACATTGTCCTTGATGTAGTTAAGAACAATGAAGTCCGACCCAT
GTTGATTCTCAGCTTAATCGTGGACTGTATGTTCGTGTTGGACATCTTCC
TAAATTTCCGAACCACCTACATTCAATCAAGTTCGGACGTGTTGGAGAAG
AACCCTAAGAAATTAGCCATACATTACCTGAGAACATGGTTTATAATTGA
TCTACTGGCGGCCATTCCGTTCGACTGGATCATGCATCAAAGAAGTTATG
GTGGAAATGTGAGTATTTAAGTCTGTCATTGCGGAGAATACTGACTTTCG
TATTTACTGACTATTTTGTAGCCAAAACAGAAAGTTTTTAGCGCTACAGT
ATACTGTGGCAAGTTTCCACTTTTTAGTCTGGAACATAGAACCTTTAAAA
CCCCCCCCCCCGATAGCATGAGAGCACGAATTCAGAGGTTATTAATAGCC
TACTTGACTCTATCTGTCTAGCTCGATCATTGTTCTACCTAAGAACAAAA
TCGTGCACAAAAGTACTACATGAACATGACATAATATGATTTAATATTTT
TTTCTTGTAGACATCAACATTGGTGGGTTTACTAAAAAGCGCACGTTTGT
TGCGTTTATTCCGCGTCGCTAGAAGACTGGATCGATATTCGGAGTATGGT
TTAGCTGTCCTTTTTCTTTTGATGTGTTTGTTTACACTGATCGCTCATTG
GTTAGCTTGTATTTGGAACGGAATCTCTTTAATCGAGGAAGGCAACCAAA
ACAGTTGGGTTCATCGTATGGATGATATCTTATACCCTAAGAACGTTACA
AGGTTGCTAACCAACAATACCCTCAACGGTACTTTGAGCAGATTATCCAT
TAATGTGATAAGGATGACGCAATCACAGCGTTACATTGCGTCCATGTATT
ACATTGTATCTTCATTGACCAGTGTAGGGTTTGGCAACATTGCAGCAACT
ACTGAATTGGAACAGATGTTTAGCATCATTACAATGTTACTTGGAGGTTA
GTTCATATTTCGTCTAGAATACATTCTCAAATTTTCTTCTTAATTCACAC
GCATTCGATTGATATCAACTNAATACACTCTCAAATTTTCTTCTTAATTC
ACACGCGTTCGATTGATATCAACTTAGACCGATTAATGCTATTGTGAAAT
TCGATCGGTTTCCACTTTATGCTCGAAAAGCCTTATGAATGTTCTGTTTG
AAAATATTTCTCTATTCCTTTTTATTCTAGCGCTTATGTACGCATGTATT
TTTGGTAACATGGTAGCAATCGTTCAGCGTTTATATTCGAAAGCATCCAC
CTTTCACACGCAAATGAACACAATACGAGAGTTCATGAAATTTTACAAAA
TACCCGAGGAATTACGACAATCTATCAATAATTACGTGCGAAGAGAATGG
GCCGTCACGCAAGGCATTGATGCCGAAACGGTAAACTTTCTTGCTCTTGT
ATCACCTTGAAAAGACGAGTTATACAGAAGCAGAAATAATTGATTTAGTG
GAACTGCCTGTTATGTTACCCTTTCATCCTTTGAAAGTTGAACAGTTCTA
TTTAACTGATTTAACTGTTGTAACTGGTAACTGACTGACTCCACTCTGAT
AATATAATCTGTTTGGTCTTTTAAGTTTCTTGTTCCTGAAATGTTGATGG
GTGTTTAGTTTAAAAAGTTGGAAATATCTCGAATCTAATGACCTTTGTAA
ACCCTAGAAGTGAGCGTGGTGAGTCGACCAATATTGGAGAAAACTGAGGA
GGAAATCTTTCAGTTGTGATTTTGCCCCCCCCCCTTAAGGGAAATATCTT
TGAAGAGATATCGCGAGTAGAGGAAGCACAAAAATGTTTGAATAATTTAC
TTTCTTTGACTGAAAACTGCTAGTTTTAGGGGTAAAAAAAGCAAAGGGGC
AATCAGTGTTGCCTTTTGGCACCCCTTGTCTTTCGATGGCCCTATACAAA
TCTGCGGCTCGGCACTGTAATGGTTTTTTTAGATTTTTAGATGTCATCAT
ACTCCATGATTAATGGTTAGAATTTTACATTTACACGCTATAGGTATTAT
CAAGATTCCCAGAATGTATCCAAGCAGATTTGACGTACGAACTCTATCAA
AACACATTTCACAGCGTCAAGCCGTTTCGTGAAGCAACCGTCAGCTGCAT
GAGAGCTATGGCCATGAAGTTTAAAACGATGACATTACAGGCTGGTAATT
TTGTGGTTCGCCAGGGTGAAGAAATAAATCGGTTGTATATTGTCGGTAAA
GGATCATTGGAAGTTTTACATGAAGGAAATCTCATCTTATATTTGAGTAA
GTTGACTCTCGGATACTGATACATGGGAAGCTGGTTGAGTTTTCTTTTAA
AATTTAATAACTTGGGGTAGAATATAGATACCTTTTTTAAAACAGGGCTT
TTATAAAAGAATCAGGTCAAAAGAAGGGACTTTTAAAACTGTTCCTTGAT
GATGCTTCTTTATTCGCCAAACGAAAGTAAAGTGAGTACAACGAATACGA
ATGCTCAGTTAAGTACTCAAGCCTTCTCTTACCATCCCTGAAATTTCTGG
TCTATTTAACTAAGCAATCCAGTATTACTCAAGAGGATCAATTCTCTCCA
TCTTTCAAACTTTAGCACGGAATTCAACATTCGGTTACGATTTCAAACTA
TGTCACCACAAGCCGAAAGCGAAAGCCAATATACGTGCGGCAAACTTGGT
GGAAATTCATTACATACACGTGACAGACTTTCTGGAAATCATGGAATGTT
ATCCAAAGTTTTTCGAACAATTTAAAGAGAATTATAAACACACATATGAT
GTCAATGATCCAAATGAGGTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042140XLOC_042140Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067473-exon-scaffold_47-1575043694:243020..243113TCONS_00067473-exon-scaffold_47-1575043694:243020..243113Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1575043694:232135..232260TCONS_00067473-exon-scaffold_47-1575043694:232135..232260Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1575043694:230856..231275TCONS_00067473-exon-scaffold_47-1575043694:230856..231275Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1575043694:230118..230553TCONS_00067473-exon-scaffold_47-1575043694:230118..230553Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1575043694:229684..229883TCONS_00067473-exon-scaffold_47-1575043694:229684..229883Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1575043694:228818..229070TCONS_00067473-exon-scaffold_47-1575043694:228818..229070Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1575043694:228291..228498TCONS_00067473-exon-scaffold_47-1575043694:228291..228498Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1510915933:243020..243113TCONS_00067473-exon-scaffold_47-1510915933:243020..243113Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1510915933:232135..232260TCONS_00067473-exon-scaffold_47-1510915933:232135..232260Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1510915933:230856..231275TCONS_00067473-exon-scaffold_47-1510915933:230856..231275Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1510915933:230118..230553TCONS_00067473-exon-scaffold_47-1510915933:230118..230553Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1510915933:229684..229883TCONS_00067473-exon-scaffold_47-1510915933:229684..229883Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1510915933:228818..229070TCONS_00067473-exon-scaffold_47-1510915933:228818..229070Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1510915933:228291..228498TCONS_00067473-exon-scaffold_47-1510915933:228291..228498Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1491911889:243020..243113TCONS_00067473-exon-scaffold_47-1491911889:243020..243113Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1491911889:232135..232260TCONS_00067473-exon-scaffold_47-1491911889:232135..232260Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1491911889:230856..231275TCONS_00067473-exon-scaffold_47-1491911889:230856..231275Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1491911889:230118..230553TCONS_00067473-exon-scaffold_47-1491911889:230118..230553Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1491911889:229684..229883TCONS_00067473-exon-scaffold_47-1491911889:229684..229883Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1491911889:228818..229070TCONS_00067473-exon-scaffold_47-1491911889:228818..229070Clytia hemisphaericaexon
TCONS_00067473-exon-scaffold_47-1491911889:228291..228498TCONS_00067473-exon-scaffold_47-1491911889:228291..228498Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:228291..243113 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.606434	0.276215	0.55435	1.04106	0	0.861537	0	0	0.476071	0	0	0	1.04446e-05	0	0	0.000278955	1.32447	2.33772	1.65737	3.98088	0	0	0	0
Blast
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BLAST of TCONS_00067473 vs. Swiss-Prot (Human)
Match: KCNH2 (Potassium voltage-gated channel subfamily H member 2 OS=Homo sapiens GN=KCNH2 PE=1 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 1.554e-113
Identity = 198/468 (42.31%), Postives = 291/468 (62.18%), Query Frame = 2 
Query:  338 FTAIQIPYYAAFSNNVNNIVLDVVKNN-EVRPMLILSLIVDCMFVLDIFLNFRTTYIQSSSDVLEKNPKKLAIHYLRTWFIIDLLAAIPFDWIMHQRSYGGNTSTLVGLLKSAXXXXXXXXXXXXXXYSEYGLAVLFLLMCLFTLIAHWLACIWNGISLIEEGNQNS---WVHRMDDILYPKXXXXXXXXXXXXXXXSRLSINVIRMTQSQRYIASMYYIVSSLTSVGFGNIAATTELEQMFSIITMLLGALMYACIFGNMVAIVQRLYSKASTFHTQMNTIREFMKFYKIPEELRQSINNYVRREWAVTQGIDAETVLSRFPECIQADLTYELYQNTFHSVKPFREATVSCMRAMAMKFKTMTLQAGNFVVRQGEEINRLYIVGKGSLEVLHEGNLILYLTRNSTFGYDFKLCHHKPKAKANIRAANLVEIHYIHVTDFLEIMECYPKFFEQFKENYKHTYDVNDPN 1729
            +TA+  PY AAF            +     +P+ ++ LIVD MF++DI +NFRTTY+ ++ +V+  +P ++A+HY + WF+ID++AAIPFD ++    +G  +  L+GLLK+ARLLRL RVAR+LDRYSEYG AVLFLLMC F LIAHWLACIW  I  +E+ + +S   W+H + D +                  S L    I+     +Y+ ++Y+  SSLTSVGFGN++  T  E++FSI  ML+G+LMYA IFGN+ AI+QRLYS  + +HTQM  +REF++F++IP  LRQ +  Y +  W+ T GID   VL  FPEC+QAD+   L ++     KPFR AT  C+RA+AMKFKT     G+ +V  G+ +  LY + +GS+E+L    ++  L +N  FG    L     K+  ++RA    ++H IH  D LE+++ YP+F + F  + + T+++ D N
Sbjct:  420 YTAVFTPYSAAFLLKETEEGPPATECGYACQPLAVVDLIVDIMFIVDILINFRTTYVNANEEVV-SHPGRIAVHYFKGWFLIDMVAAIPFDLLI----FGSGSEELIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQI------------GKPYNSSGLGGPSIK----DKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYPEFSDHFWSSLEITFNLRDTN 866
The following BLAST results are available for this feature:
BLAST of TCONS_00067473 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNH21.554e-11342.31Potassium voltage-gated channel subfamily H member... [more]
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