TCONS_00067472 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067472
Unique NameTCONS_00067472
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2017

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067472 ID=TCONS_00067472|Name=TCONS_00067472|organism=Clytia hemisphaerica|type=transcript|length=2017bp
aaagatattaaccttTTGATAAGAGTTGGGATTAGATGTTGGATTTAACT
TTCAAAACGATGATTCTATTCATGTAAACTCCTCAACTGATCGAAGAAGG
AATAACCATCCTGTTCTTTTGATACGTAGATCTTCTCAATatattctttt
caataaagatcGATAGTAGACAATTTTTCAGGGCATTTTATTTGGAATAA
gaattattcaataaatttgTTACAAACGCTTATAAGTATTTAAATACTTT
GGATTTCACAATCATCGACAACGTCGGACACAGGGTATTAATCGAGATGG
GACAAAATACTTCTTTTTTACCAGTCGAAGATGTGGATCAAGAGGATGCG
TGCTTGGCGCCCGAAATTGCAAAGGGAATGATCGGTTTGCCACGGAAGTT
TCCGTCACCAGAGAAAGATGAAGATCTAGATGACGAAGAAGAAGCGTCTT
GTGAAGAACTCGTTGTCACTGGTATCCCTTTCGCCAGTCACAAACATGCT
GTCGGCTCATTGAATCCAGCTTTGGGAAACATCGAAGTTCGACGCTGTAA
CTTTGTCATCAACCACGAGGGACGCTTCAAAGTGTTATGGGATTGGATCG
TCTTAGTGTTGGTCATCTTTACCGCTATCCAGATTCCATACTATGCTGCA
TTCTCTAATAATGTCAACAACATTGTCCTTGATGTAGTTAAGAACAATGA
AGTCCGACCCATGTTGATTCTCAGCTTAATCGTGGACTGTATGTTCGTGT
TGGACATCTTCCTAAATTTCCGAACCACCTACATTCAATCAAGTTCGGAC
GTGTTGGAGAAGAACCCTAAGAAATTAGCCATACATTACCTGAGAACATG
GTTTATAATTGATCTACTGGCGGCCATTCCGTTCGACTGGATCATGCATC
AAAGAAGTTATGGTGGAAATACATCAACATTGGTGGGTTTACTAAAAAGC
GCACGTTTGTTGCGTTTATTCCGCGTCGCTAGAAGACTGGATCGATATTC
GGAGTATGGTTTAGCTGTCCTTTTTCTTTTGATGTGTTTGTTTACACTGA
TCGCTCATTGGTTAGCTTGTATTTGGAACGGAATCTCTTTAATCGAGGAA
GGCAACCAAAACAGTTGGGTTCATCGTATGGATGATATCTTATACCCTAA
GAACGTTACAAGGTTGCTAACCAACAATACCCTCAACGGTACTTTGAGCA
GATTATCCATTAATGTGATAAGGATGACGCAATCACAGCGTTACATTGCG
TCCATGTATTACATTGTATCTTCATTGACCAGTGTAGGGTTTGGCAACAT
TGCAGCAACTACTGAATTGGAACAGATGTTTAGCATCATTACAATGTTAC
TTGGAGCGCTTATGTACGCATGTATTTTTGGTAACATGGTAGCAATCGTT
CAGCGTTTATATTCGAAAGCATCCACCTTTCACACGCAAATGAACACAAT
ACGAGAGTTcatgaaattttacaaaataccCGAGGAATTACGACAATCTA
TCAATAATTACGTGCGAAGAGAATGGGCCGTCACGCAAGGCATTGATGCC
GAAACGGTATTATCAAGATTCCCAGAATGTATCCAAGCAGATTTGACGTA
CGAACTCTATCAAAACACATTTCACAGCGTCAAGCCGTTTCGTGAAGCAA
CCGTCAGCTGCAtgagagctatggccatgaagtTTAAAACGATGACATTA
CAGGCTGGTAATTTTGTGGTTCGCCAGGGTGAAGAAATAAATCGGTTGTA
TATTGTCGGTAAAGGATCATTGGAAGTTTTACATGAAGGAAATCTCATCT
TATATTTGACACGGAATTCAACATTCGGTTACGATTTCAAACTATGTCAC
CACAAGCCGAAAGCGAAAGCCAATATACGTGCGGCAAACTTGGTGGAAAT
TCATTACATACACGTGACAGACTTTCTGGAAATCATGGAATGTTATCCAA
AGTTTTTCGAACAATTTAAAGAGAATTATAAACACACATATGATGTCAAT
GATCCAAATGAGGTGAG
Run BLAST on NCBI

transcript from alignment at scaffold_47:228291..240038-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067472 ID=TCONS_00067472|Name=TCONS_00067472|organism=Clytia hemisphaerica|type=transcript|length=11748bp|location=Sequence derived from alignment at scaffold_47:228291..240038- (Clytia hemisphaerica)
AAAGATATTAACCTTTTGATAAGAGTTGGGATTAGATGTTGGATTTAACT
TTCAAAACGATGATTCTATTCATGTAAACTCCTCAACTGATCGAAGAAGG
AATAACCATCCTGTTCTTTTGATACGTAGATCTTCTCAATATATTCTTTT
CAATAAAGATCGATAGTAGACAATTTTTCAGGGCATTTTATTTGGAATAA
GAATTATTCAATAAATTTGTTACAAACGCTTATAAGTATTTAAATACTTT
GGATTTCACAATCATCGACAACGTCGGACACAGGGTATTAATCGAGATGG
GACAAAATACTTCTTTTTTACCAGTCGAAGATGTGGATCAAGAGGATGCG
TGCTTGGCGCCCGAAATTGCAAAGGTAAAAAACTGATAGGATTTATATTT
ATGTATTTTGCACACTGACTCCAATCATAGTCAACTACTCCCACAAACGC
TACCATCATCTTCTGCCACCAAAGTCACCAACAATGGATGAGGATCAACC
CAGTGATGTATCATCCATTGACATAACATCGACCCCACCAAAATGTACAG
CTGCAAATTGCTTCGTTCAAGACGCTGATTCTATGATTTGATACAACTTT
ACACTTAACCCCGGGGGGGGGGGGTACTAGGGTTGCGAGCTGACGGGGGG
CACTTAACATTTGAGATAAATGTCACAAGAACTTAAAATGTTTAAAGGAA
CCGATTCAGTTGTCAGGCTTTGTCTATCCATCTATTAAACGAATCTTGAA
TCAAAATACCTGTAAGCTTTTGACTATACTCGGAATACTGAGACTGAGAC
TTTCTCCTAAATCTTGAGCACAATACGTAATAGACTCATTATTTATTAGT
TTTTACGCGAATTTGAAAACGTATTAGCGCTTTAATTTGATATGTTTTGA
TATGAGATTTCCTGGAATAGAATGAAGTTGAGGAAGGAAACAATCTTTCA
AAAACTTTTTTCTTAACTTTTTTTATTGTAANCTGGAATAGAATGAAGTT
GAGGAAGGAAACAATCTTTCAAAAACTTTTTTTATTGTAAATGAAGCCAA
ATACATTGTCTTTGGGAATAAAATCTATTGAAGAAGTTCGAAGACAAAAT
ATAATCCCGTTTGAATAGAAAGATAAGTTAAAGAGTTTTGTTACGTTACA
CTTTTTTTCGGACGTTGAACTTTCAAAGCTTCTTTTAGTTCTGTTAGTTT
CCGACAACTCCATGTTTGTCCAATAAAATGTGGTCGTTTCCAAAGGTAAC
GATGATGCTGTAATGCAAATAGTAGTCGAAAAACAATTTCTCAATAATTT
GGTATCATTAATCATACAAAAGATAATATGGAAGACTTTGATATAATATT
TTTCGATAGTTTATCGCTTACGTTAAGTGGCTGTAGTCTGTAATAGAGTA
TATTATCTTATGGTGAGTATATTTGATAGGCACTTTAGAACTAGGTACAG
TAGTCTACCAATGTGGAGATTTAGTTCTTATTTTACAAGGTTTTAATAAC
GCTCAAAGAGTACCCTTTTTGACGTCTTTTCGGAATTTTTCAATCAGCTT
TAATTCTACTGAACCAAATTCAAAAAGTTACGCAGCAAATTTTAAGTTTA
ACTTTTCTCCTTTTTAATGAAATCATAAAAGAGAAATTTCGTAAAAATTC
ATATTATTACTGACACAGTAGCAATCAAACTCTTATACGATTTCATTGGT
CACCTGGTAAAAAACCTTACGGCGCTTGATACAAGATAGTGTCCACATCA
AGGTAATGTACCTTACTGACAGTAAGAGTAGTAAGAAAACTTTGGGAACT
TAACTGGTGAAGAATGAGGGTTTGTTTGCTTACGATAGCAGATTGAAAAG
GGTAATCTGACCCACCTCTCAGAGACGCCTTCTTAAGTGATTTCATTCCC
CAATTTTCTAAAAAAGTGGGATAAATTATAAAAAGAGTGAGGTGAAACAG
TTTGAATGACAAAAAAGCACTTCCCTTACTAACACTTTTTGTTAATCTCA
ATTTGCAATCGGATTGAGCTTTGATTTTTCGTCCCTAAAGCACACACAGG
GAGAAGGACAGCCCTCTGATTCACTCCTCCTTGGGCGACACCTGCTTCTT
ATACTTTCTTGATATGATATAACGTGTTGAGAAACCTTCATTATTTTTCT
GATGGAAAGAAAAACTGAAGTTGATGTCTTTTTGATGACGTGCTTTTCAA
ATTTTCTTTCGCGATCAACTGCATATGGTCATGTTCCCTTCAAGTTGCTT
TGAAATTTTCTGTTTGGAATGAACAAGAACGCCGGAGTGTTCTATTCAAA
GCAAGCGCAAGTCATGGGTATTTTATTCATCAAAGTAAGAATATTTTAGT
AATTATGGTATTCAGCTCTTGTGGGACCTTCCTGCGGGCTTTTTTAACGC
AGCATGCTAAAATCATTCACGAGGGGATTTGAATAAATGGACTATTCATA
AAAAATTACTTTTTAATCAAAATTTTTGCATCATTTTTAATTCTACGCAC
TCAGAGTGTAACCTTAAAATTAAAATCTTTGACAGAAAGAAATTTTCACC
AATTAACTAAATTCGCTGAAATTTCTTCGCGTTAATTTAAAAAATTTTTG
TTAGGCTAAATTGCGCGAAAATTGTTAGATAAATATTCATTTATTAGTGG
AGGATAGAAACTAGTGCGAAGAAAATTCAAATTTAGCTTTCGGTTTACTC
ATGCTTGGCATTGTCCCGCTAATTTCACTCTATTGTAAAAATTATTCCTA
CTGAAATTAAACTCGTTTTATTGAAGAAAGGAAGCAATCTTTACGGAAAG
TCTCAAAAACGGGTCAGAGAATGTGAAATTTTCAGACAGTCTAGCATCAT
ATGTTTATTGTCATTTATTTTTACACATTTTGAACTACCGGGTCAATGGA
AAGGTTATTATTTTGACTGTGAGTGAGTAGAAGGTCAACTGACGCACAAC
TTTATGCGTTGATACTTGACGAAAATTTTTCATTTCAAAACTGCAGTGTT
TAGTATGATTCGCAAGGTAAGATATTTTGTTTTTTTATCTTCTGATAATC
TAAAGGGTTTGAAAAGGTATAAATTTTTCGGATTAACTTCCATTGATCAT
GTATGGATTAACACAGATGATTTGAACATTTCATTATTTTTTTAATGGGT
GATTTTTACCGTCAACTATTTTTGGACGAACTATCTTACCGATTCTTTAA
AATGAATTAAAAAACAAATTAAAAAACAATTCTTTCAAGTTTAGAAGGGC
TTTGAAAAGTTAATTTAGTTTTTTAACAATTTTGCGAAGCTTTCTTTGAA
CTAGAAATCATAAAAGAAACTTTCTTTGGTTCTAAGGATGTACTTAGAGA
GAAAGATATGACTAATTCAAAATATCGTGGCTATTTTCTAATGTATTTTC
CATGTGGATGAATTTTTATCCATTAAAGGGAAAATAGGAAGATTATTCGT
TTCCATCTCACTCACTCCACAAACACAAACTTCCTGTTCAGGACAAAAAA
AGGAAAAAGTACAGTCCTGTCAAATTAGAAAATAGTGGTGAAAGTAGGAT
ATCAAGCGCGGTTGGATACTTTACCGAACACTCAAGCAGATGGAGTGTCT
TGTATTTCCAAAAAAAATCACGTCTTGAAAGCGAACCTAAACACTCCTCC
TTCTTTCATTGTGCTTTCCTGGAGGTGGTTTGCTTGACAATAGCAATAGC
AAAGACTTTCGATCCAAAAAAAGAAGATTTTTTTTCGAAGATTTTTTTCC
TTTTTCTCCTTATTTCTTCGGATTATAAGTACCATCGTGTTTTTAATTTC
TCTGTTTCCCTTGAAATAACATAAAATACTCAGTCAAAATATCCACGCAG
ATTTTTTCCCTTGTACTTTTTAAAGAATTTTCTGATGAAGCAAGAAAAAG
AAGTAAAGAATCTATTTCGTCATAAAATTATTTTGTCCCCTTTTTCGTAG
ATGTTTCTATAACCTTGAAACAGACTATGAGACCAGCAAATTCACTTGTT
TAACATTGACAAACAATGTTGTCAACACTTACTGTAAAAATCAGAGTTGT
ATTAGGTGGCAAAGTAGAATAGGGCAATGAAGTGGTTTGCCGTTAAAAAA
AAATCAAAAAAATGTAATTTTTTAGTATTTGTTATCCATTAGCCTAAACT
GTAGCCTCACATATCAGTATAGTTCATGAGACAGGAGATAGTTTTTAAGT
GAATCCTAGCAGAAGGTTGGTTTGTCAGCTTGTAAATTCACAGATCTAGA
TATTGTTTGACAGCCGAAACCTTTAGAAACGATTTTTAGTGATTCCTTTT
GAAAGCTCGTTGATGTGGTAAACTACGGTCTTCAAACTCAAGTAGAAAAA
GGTGTCGGCATATATTTGACTTAAAGAAACACTCCCTTTTTAACGTGCAA
AAGACTTATGCAAAATAAATTTTAGCCTCGATAACCCCTTTCATTACGTC
AAAATCTTTATGGAAATTTAGGACCGAAGTTTAGGTACTTTCTTTCTATT
ATAATTTTAAAACTTCATTGAATTTTCAAAAGCATACAAAGTCATCTAAA
TAATAAAGATCCCAAACGAGAAAGTGTTGCTCAAAATGAAAAAAAAACAA
TTTTTTCAGACTCCTCTTCGGGAGGTGCTTTTCTGCAAACTTGGATATTT
CACAGTCAGTAACAACGAATAAATAAGTTCAAACTCACAAGAAACGTTTG
TCATAAAGATATCTGTTGAAGTCCTTCTAGTCAAAATATTAAAACCTCGT
TCAGACTCAAGAAAAGTTTAACAGATAGAAAGAAAAATCGTATTACTAAG
AAATAATCTTTTCCACAAAAGTAAAAATAACCAAAATTTTGATACAAGCC
ATCTAAGCTGAAAACTAAAAATACAGTAAATATGTCCATCAGGGTATGAC
CATTAACCTAAGTCTAATTATGTAAGAAGTGATAGGTTAAAACAACTAGA
GACAGGAGTATTTTTTGAAACAAAGTAGATACACATCTGTGATGGTTATC
TGCTTTGCTTTTTGTGATCTTTTTCACTCTTGTTATTGACTTTTTCAATT
TTCACATTTGATGATACTTAGGCTACTTGTAGAAAAAAGGGGAAAAGAAA
AATCGAGAAAAAGGGAATGGTAGTTTTCAAGAATAGTGATTGTTGCTAAA
GAAAAGAGATTTTTGTCAGTTTTTTTTTAAGATACAAAGTTATGTAAATT
TCAAACAAATTAAACACTGTAAGAGTGGTTGGAATGGTAGATATCTATTT
TTCTAGAAACAGGTAGCGTAGTAGGTTTACCGCCCACGCATGGAATTTTG
ACATTTGTATTGATTGTTTCTTGGAAGAGAAAGAGAGCTCGGAAGCAAGA
TGATTCCCACAGTCACTCATGCTGCTTTCAAGGTTTTTTTAAAATTTTTA
AATGTTTTTTACGGTAAACTATTTTCCCAATGCAAGATGCATTCTTCTTT
ATATTGCCCTTCTCACTTTAAAAACTTTTATTTCACCCTTCTATCATAAT
GTCTTTTTTCAAAATTTTTGTCATGTACAAGATTCTCCCTTTTTTTGTTT
CGTAAAAAGTCTTGAATAATTCACAAAGTGCATGGCGTTGTTGGGGCGTT
GTTACAATTTTGGCTGGATCTTTATTTCTCTCTTTGTCCAAGAGAAAGAA
AACTTTTCTATAGAGAATAATGCAGTGAGGAATTTAAAAAGTGTTTTGAA
AATTATTTATATCTGCCAATGTCAAATGAAAAGGTGCCTTATTTTCAAAT
TAGATATGATTTTGACAAACTTTATAAAGTCATACTGTGGTCTACGAACA
GCCGTATCAATTTAGAATTTCCTAAAAGAGAAGCATCGTTTCTACGCATT
CAACTAACGAAAGAATTATGTATCGTTCTTTCCATTACAAAGTTAACTTT
AAAAAGGTGATTTCTGTTCTAAAAAACTTCAAAGATGGTAGCCAGATATC
ATGCGATAGTTTTCTCGAGAAAGAATTTTTCCTCCCTCTTCTACGTTGTT
GTTTGTTAAGATCATTAAAATCCATTTTAGATATTTGTTTCATAATTTTT
CCCTTTTTTCTTGACTTTCGTTCTTCAGAAATTTTCATTTTTTCATTAAT
TAAGTAACTTAGACCAAGTTCATTGCTTAAACAATCAAACCAACCATTTT
CACTTTAGACGAGAGTTTCTTTTGATAAAATAGTCGATTTTTAACTGTGT
CTCGTCCCTAGTTCCCAAGAGTGAACAGTTCGGATCCAACACCTCTGTGT
CACATACCCAATGGGACCCCAGCCCTCTGGAAAATTTGGCAAAAACTTCA
TCCCCGATGGGAAAATACGCCGGAATTTCAGCCCCACTGGGAAAATGGCT
TTGATTTTTCGAAATTCAATGTTTAAAAATTGTACTCCAAAACCATCCCC
ACTGGACTTTCTAACCTTGAACCTTTTAACCTAGAATTTTTATCCACCAC
CTCAGTGGGGTTGTGAGACAGGGGTGTGATCCAACGCCAATCAATTTTTT
TTATAAAAAGTATATTTTAAAGACCAGTGTACGTTACATGTTTTCTTTTT
ATAAGCATAACGCTTATAAGCATACGAAGGCTCAGATTTGCAAAATTCCT
AAGCATAACATGAGCATATATGTCAGCCTAAAATATTTTTCAAGTGGTCA
TTTTTATCTGTTTAAAAAGGTTTGGTAGAGGTCAAGTAAAAAATAAGACA
TTCCACTACTCGCTAACATTCCACTGCTCCCAAAATCTGAACAAATTTTT
ACAACATTTCTGAAATTTAATTAAAAACTTGGCTCGATGGGGTGAATCAT
AAGCATGATTCTTAAGCATATAATAAGCATAAACTATGCCTGGATGCTTT
AGGAACTTAAGCATACACGAGCCTGACCAAGGGGCATACACTTGCTTATA
AAAAAAAAACCTGTATGTGGCTACAAAGTCCTTTAAGTCTGGGAAAGTTT
GGAACGTTTTGACAAAATGAATCATCTGTTTATTTGCGTGTTTGCAATCA
AAGTTGAAAAAAAAACACAATCCAAGATTGGAAGAAGCTTTACTCTAGTT
TCCTTCTAAATCACAATTTCCTTTGTGTAAACATCAATACTTACATCAAT
ACTCAAAAAAAGATTATTACGTGTTCAACAAAATTATTCCGTCTTCAAAG
TATACAACCACCGCATCCTTTTCCTCTAACATCTATTTTTCATCACACTT
CAAAAAAGGTCACTCAGTAATTCTTTTCTTTCTTCGTTCAACTATTTACG
GTTCTTAGGTTTAAAGAATTCCTATTTCTTAAGATTTTTTGGCCTTTGAA
AAATCAGTTAGGACCGTTATGTTGGTTGCCGTTATGACGGTCATACAAAG
ACTCAGTGTAAGTATGGTGGATAAGCTGTGTATGCCTTAACTTCAAATGT
TGATTTCTACACTTGGCGGTTTCAGTGTAGAACTAACCAAAGTTTTATTT
TAGGCTATACTTTAAGTTATCATATTCTGAAAAATATTCGTCGGCAGAAA
TTTGACAAGAAAATTAACGGAATCATTCGCCGACAAAGATCATTTTTCCG
ACAATTTTTACCGATAAATCAAAATAATCAAAGCCAGATATTCATTGATG
TTTTCCATGGCATTAGATTCTTGTAGGGCTGATTGAGGTGATATTAAATC
TAAATACTACAGTGCATTCGAATAACTAGACGGGAATGTTAGCTATATGG
TTTATACAAACCAAACTTTCAATCTTCAAAATTATCGAACCTGATCTAAT
ATAACGAGATTGTATTTTCACTTTTCAGGGAATGATCGGTTTGCCACGGA
AGTTTCCGTCACCAGAGAAAGATGAAGATCTAGATGACGAAGAAGAAGCG
TCTTGTGAAGAACTCGTTGTCACTGGTATCCCTTTCGCCAGTCACAAACA
TGCTGTAAGTCATTAGTTCATGTTGCCAACAAGGCTATATTTTTCGTGGA
AACTTACCTTACAAAAACTTTCTGTCTAGATTCTAGCTCATTAGAGATAA
ATCTGAACTAAGTTTTCAATCCAAAATAGATCATGTGAGACCCCTTACCG
AAAAATCGTCTCAATTTGAAAAACTTTTTGTCAAATTACACCTAAGTGTC
ATCCCTTTGTCGGGGAAGATCAAAACTTTGAGGTCCACTGAATTTCTGAC
ATTAACCAATAGATATCAAACTCCCCACAAGTTAACATAACATTCTCGTC
AGCGTAACTCTTTCATGGAAGTAAAAATTGACCAACGGGTAACTGATGCA
AAGGTTTTATGAATCCTTTTTCAAAGCGTATACCTTATCGGGGAAAAAAA
TGTCGGAGTTTTATTTAGTCGGGTTTTTTTTTTCGTCGGAGAAAAATTTC
GTCACCTAGAAGCATTTTCGTCACTTTCCCCCGATCAAAATTTCAGATTC
GTCACTTTTATCCGACCAAATCTACAATTTAGTCACTTCCACCGCTTCCA
CCCGACTAAATTGTCCAAATGAAATGGTTTGCTTCACTAGCTCAAAAAAA
GATCTTGTAATTCGACGTTTAAAGCACTAATTTTGGTTGATATAGGTGTA
AAAATTTATATTTTAATTTTGGTTGGTTTTTTTTTTTAAATCGGGTAAAA
GTTTTGGTCAGGGATAAAAAAGTCGGGTAAAAGTTTTGGTCGGGTGATAA
AATATCGGGGAAAAAATTCGTCGGGGGGGAATTTCGTTACCCCCTCAAAA
TTTTCGTCACTTTCCCCCGACATTTTTTCCCAGTTGAGGTGTATGGGTTT
TTCTTGTATTCAGGTCGGCTCATTGAATCCAGCTTTGGGAAACATCGAAG
TTCGACGCTGTAACTTTGTCATCAACCACGAGGGACGCTTCAAAGTGTTA
TGGGATTGGATCGTCTTAGTGTTGGTCATCTTTACCGCTATCCAGATTCC
ATACTATGCTGCATTCTCTAATAATGTCAACAACATTGTCCTTGATGTAG
TTAAGAACAATGAAGTCCGACCCATGTTGATTCTCAGCTTAATCGTGGAC
TGTATGTTCGTGTTGGACATCTTCCTAAATTTCCGAACCACCTACATTCA
ATCAAGTTCGGACGTGTTGGAGAAGAACCCTAAGAAATTAGCCATACATT
ACCTGAGAACATGGTTTATAATTGATCTACTGGCGGCCATTCCGTTCGAC
TGGATCATGCATCAAAGAAGTTATGGTGGAAATGTGAGTATTTAAGTCTG
TCATTGCGGAGAATACTGACTTTCGTATTTACTGACTATTTTGTAGCCAA
AACAGAAAGTTTTTAGCGCTACAGTATACTGTGGCAAGTTTCCACTTTTT
AGTCTGGAACATAGAACCTTTAAAACCCCCCCCCCCGATAGCATGAGAGC
ACGAATTCAGAGGTTATTAATAGCCTACTTGACTCTATCTGTCTAGCTCG
ATCATTGTTCTACCTAAGAACAAAATCGTGCACAAAAGTACTACATGAAC
ATGACATAATATGATTTAATATTTTTTTCTTGTAGACATCAACATTGGTG
GGTTTACTAAAAAGCGCACGTTTGTTGCGTTTATTCCGCGTCGCTAGAAG
ACTGGATCGATATTCGGAGTATGGTTTAGCTGTCCTTTTTCTTTTGATGT
GTTTGTTTACACTGATCGCTCATTGGTTAGCTTGTATTTGGAACGGAATC
TCTTTAATCGAGGAAGGCAACCAAAACAGTTGGGTTCATCGTATGGATGA
TATCTTATACCCTAAGAACGTTACAAGGTTGCTAACCAACAATACCCTCA
ACGGTACTTTGAGCAGATTATCCATTAATGTGATAAGGATGACGCAATCA
CAGCGTTACATTGCGTCCATGTATTACATTGTATCTTCATTGACCAGTGT
AGGGTTTGGCAACATTGCAGCAACTACTGAATTGGAACAGATGTTTAGCA
TCATTACAATGTTACTTGGAGGTTAGTTCATATTTCGTCTAGAATACATT
CTCAAATTTTCTTCTTAATTCACACGCATTCGATTGATATCAACTNAATA
CACTCTCAAATTTTCTTCTTAATTCACACGCGTTCGATTGATATCAACTT
AGACCGATTAATGCTATTGTGAAATTCGATCGGTTTCCACTTTATGCTCG
AAAAGCCTTATGAATGTTCTGTTTGAAAATATTTCTCTATTCCTTTTTAT
TCTAGCGCTTATGTACGCATGTATTTTTGGTAACATGGTAGCAATCGTTC
AGCGTTTATATTCGAAAGCATCCACCTTTCACACGCAAATGAACACAATA
CGAGAGTTCATGAAATTTTACAAAATACCCGAGGAATTACGACAATCTAT
CAATAATTACGTGCGAAGAGAATGGGCCGTCACGCAAGGCATTGATGCCG
AAACGGTAAACTTTCTTGCTCTTGTATCACCTTGAAAAGACGAGTTATAC
AGAAGCAGAAATAATTGATTTAGTGGAACTGCCTGTTATGTTACCCTTTC
ATCCTTTGAAAGTTGAACAGTTCTATTTAACTGATTTAACTGTTGTAACT
GGTAACTGACTGACTCCACTCTGATAATATAATCTGTTTGGTCTTTTAAG
TTTCTTGTTCCTGAAATGTTGATGGGTGTTTAGTTTAAAAAGTTGGAAAT
ATCTCGAATCTAATGACCTTTGTAAACCCTAGAAGTGAGCGTGGTGAGTC
GACCAATATTGGAGAAAACTGAGGAGGAAATCTTTCAGTTGTGATTTTGC
CCCCCCCCCTTAAGGGAAATATCTTTGAAGAGATATCGCGAGTAGAGGAA
GCACAAAAATGTTTGAATAATTTACTTTCTTTGACTGAAAACTGCTAGTT
TTAGGGGTAAAAAAAGCAAAGGGGCAATCAGTGTTGCCTTTTGGCACCCC
TTGTCTTTCGATGGCCCTATACAAATCTGCGGCTCGGCACTGTAATGGTT
TTTTTAGATTTTTAGATGTCATCATACTCCATGATTAATGGTTAGAATTT
TACATTTACACGCTATAGGTATTATCAAGATTCCCAGAATGTATCCAAGC
AGATTTGACGTACGAACTCTATCAAAACACATTTCACAGCGTCAAGCCGT
TTCGTGAAGCAACCGTCAGCTGCATGAGAGCTATGGCCATGAAGTTTAAA
ACGATGACATTACAGGCTGGTAATTTTGTGGTTCGCCAGGGTGAAGAAAT
AAATCGGTTGTATATTGTCGGTAAAGGATCATTGGAAGTTTTACATGAAG
GAAATCTCATCTTATATTTGAGTAAGTTGACTCTCGGATACTGATACATG
GGAAGCTGGTTGAGTTTTCTTTTAAAATTTAATAACTTGGGGTAGAATAT
AGATACCTTTTTTAAAACAGGGCTTTTATAAAAGAATCAGGTCAAAAGAA
GGGACTTTTAAAACTGTTCCTTGATGATGCTTCTTTATTCGCCAAACGAA
AGTAAAGTGAGTACAACGAATACGAATGCTCAGTTAAGTACTCAAGCCTT
CTCTTACCATCCCTGAAATTTCTGGTCTATTTAACTAAGCAATCCAGTAT
TACTCAAGAGGATCAATTCTCTCCATCTTTCAAACTTTAGCACGGAATTC
AACATTCGGTTACGATTTCAAACTATGTCACCACAAGCCGAAAGCGAAAG
CCAATATACGTGCGGCAAACTTGGTGGAAATTCATTACATACACGTGACA
GACTTTCTGGAAATCATGGAATGTTATCCAAAGTTTTTCGAACAATTTAA
AGAGAATTATAAACACACATATGATGTCAATGATCCAAATGAGGTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042140XLOC_042140Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067472-exon-scaffold_47-1575043694:239665..240038TCONS_00067472-exon-scaffold_47-1575043694:239665..240038Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1575043694:232135..232260TCONS_00067472-exon-scaffold_47-1575043694:232135..232260Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1575043694:230856..231275TCONS_00067472-exon-scaffold_47-1575043694:230856..231275Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1575043694:230118..230553TCONS_00067472-exon-scaffold_47-1575043694:230118..230553Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1575043694:229684..229883TCONS_00067472-exon-scaffold_47-1575043694:229684..229883Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1575043694:228818..229070TCONS_00067472-exon-scaffold_47-1575043694:228818..229070Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1575043694:228291..228498TCONS_00067472-exon-scaffold_47-1575043694:228291..228498Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1510915933:239665..240038TCONS_00067472-exon-scaffold_47-1510915933:239665..240038Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1510915933:232135..232260TCONS_00067472-exon-scaffold_47-1510915933:232135..232260Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1510915933:230856..231275TCONS_00067472-exon-scaffold_47-1510915933:230856..231275Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1510915933:230118..230553TCONS_00067472-exon-scaffold_47-1510915933:230118..230553Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1510915933:229684..229883TCONS_00067472-exon-scaffold_47-1510915933:229684..229883Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1510915933:228818..229070TCONS_00067472-exon-scaffold_47-1510915933:228818..229070Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1510915933:228291..228498TCONS_00067472-exon-scaffold_47-1510915933:228291..228498Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1491911889:239665..240038TCONS_00067472-exon-scaffold_47-1491911889:239665..240038Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1491911889:232135..232260TCONS_00067472-exon-scaffold_47-1491911889:232135..232260Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1491911889:230856..231275TCONS_00067472-exon-scaffold_47-1491911889:230856..231275Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1491911889:230118..230553TCONS_00067472-exon-scaffold_47-1491911889:230118..230553Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1491911889:229684..229883TCONS_00067472-exon-scaffold_47-1491911889:229684..229883Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1491911889:228818..229070TCONS_00067472-exon-scaffold_47-1491911889:228818..229070Clytia hemisphaericaexon
TCONS_00067472-exon-scaffold_47-1491911889:228291..228498TCONS_00067472-exon-scaffold_47-1491911889:228291..228498Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:228291..240038 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.089405	0	0	0	0	0	0	1.03125	0.847488	1.50964	1.08761	0.0736055	0.28196	0.0680229	0.0614455	0.427963	0.8766	0.852975	0	1.28044	1.49697	0.419771	1.0364	0.40541	1.99238	1.24181	0.528036	0	0
Blast
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BLAST of TCONS_00067472 vs. Swiss-Prot (Human)
Match: KCNH2 (Potassium voltage-gated channel subfamily H member 2 OS=Homo sapiens GN=KCNH2 PE=1 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 6.024e-113
Identity = 198/468 (42.31%), Postives = 291/468 (62.18%), Query Frame = 3 
Query:  618 FTAIQIPYYAAFSNNVNNIVLDVVKNN-EVRPMLILSLIVDCMFVLDIFLNFRTTYIQSSSDVLEKNPKKLAIHYLRTWFIIDLLAAIPFDWIMHQRSYGGNTSTLVGLLKSAXXXXXXXXXXXXXXYSEYGLAVLFLLMCLFTLIAHWLACIWNGISLIEEGNQNS---WVHRMDDILYPKXXXXXXXXXXXXXXXSRLSINVIRMTQSQRYIASMYYIVSSLTSVGFGNIAATTELEQMFSIITMLLGALMYACIFGNMVAIVQRLYSKASTFHTQMNTIREFMKFYKIPEELRQSINNYVRREWAVTQGIDAETVLSRFPECIQADLTYELYQNTFHSVKPFREATVSCMRAMAMKFKTMTLQAGNFVVRQGEEINRLYIVGKGSLEVLHEGNLILYLTRNSTFGYDFKLCHHKPKAKANIRAANLVEIHYIHVTDFLEIMECYPKFFEQFKENYKHTYDVNDPN 2009
            +TA+  PY AAF            +     +P+ ++ LIVD MF++DI +NFRTTY+ ++ +V+  +P ++A+HY + WF+ID++AAIPFD ++    +G  +  L+GLLK+ARLLRL RVAR+LDRYSEYG AVLFLLMC F LIAHWLACIW  I  +E+ + +S   W+H + D +                  S L    I+     +Y+ ++Y+  SSLTSVGFGN++  T  E++FSI  ML+G+LMYA IFGN+ AI+QRLYS  + +HTQM  +REF++F++IP  LRQ +  Y +  W+ T GID   VL  FPEC+QAD+   L ++     KPFR AT  C+RA+AMKFKT     G+ +V  G+ +  LY + +GS+E+L    ++  L +N  FG    L     K+  ++RA    ++H IH  D LE+++ YP+F + F  + + T+++ D N
Sbjct:  420 YTAVFTPYSAAFLLKETEEGPPATECGYACQPLAVVDLIVDIMFIVDILINFRTTYVNANEEVV-SHPGRIAVHYFKGWFLIDMVAAIPFDLLI----FGSGSEELIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQI------------GKPYNSSGLGGPSIK----DKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYPEFSDHFWSSLEITFNLRDTN 866
The following BLAST results are available for this feature:
BLAST of TCONS_00067472 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNH26.024e-11342.31Potassium voltage-gated channel subfamily H member... [more]
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