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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067457 ID=TCONS_00067457|Name=TCONS_00067457|organism=Clytia hemisphaerica|type=transcript|length=1393bp
AATACAGACGTAGCATTTGAGAGTGCAATTAATCTATTTTCAAATGACAA
CTTAACTAGTAATctcttaaatcttttttaaccATTATATGTGAAGTGTA
ATTGCTTCACTGCTCATAATAAGATTTATTTTATCATCACATCAAAGCTT
TATGTTTCTTGTTAGCCCAACAACGTAATTGATGGTCTTAAGGATAATGC
TACAACTCGAACAATATCTCTCCCTGATATATGCGTTGTAtaataaataa
ggtttttttaacTTCGTGTAGTGAAAATTGGATTAAGTTCTCCACTTCAA
GGTTAAAATGAAGAGGTGTTAAATTGAAAGAGGTCTTTTTGGATTTCTAT
TTTGTTCATCTTATTCATATTGTGTTTTGATGTCTCTTCTTTTATTTGAT
TATGGgttttctacttttctttaaGACATGGATGAAGGGGGTACAGGTGC
CAGCAGCAGCAGCAATGGAGATAGAGGGCAAaactccaaacaaaaagaaT
ATGATGAAGACGGTTGGGAAATTGTCAGAAGGTCCAAAAAACGTTGATAT
TTCCAAACCATTTTGCGTCGCGGTTGTTTGAAAAAGATTGTTCTTACCCG
TGGTGAAAGGTAGACTTTGGTTCGTCCTGGGTTTGTGTTTGGTAGACCAC
TTCATCTGGTACCCGAATACGTTGCGTTGGTAGTTGTCATCAAACGACTT
GGACAGAAACTTCTTCATTACTCGTACAAGTTATGTTTACAAGTACTCAC
TCGAGTGCAATGGAACGTTATCAATCTTATAAACTAGAAGAAGCGAGAGA
TGATTTCcccaaagaaaataaaaagtgacGTCGAAATTTTCTTTACAAAC
ATATAATAAACATTACAAACACTCTTTTCGATTATTGCAACAATGATACC
TCCCCTCTCAAAAGTgacgttgttttgattttcaatgtGGTATGCATACA
TGCAGAAACTCGATGTCAGAAAAACTCCTTACAATCTTAGATAAtgcaaa
aaatgctttttaataGAGATCGTTGTTAGTAATTAATTCCATGTGATTTC
TATCTTTTATTTGTGGCACAGACCTTGTTGTGACTGTGCGCGATGGAGAT
GAAACTTGGAACGTATATTCGCATAAACAGGTCGATGGGAAGATGATTTG
AATTTTAAGTATTATAATGTTGTTATATTTCACTTTATAACTTGGATAGA
TGTTAGATATATTTTTTGATTCACACCGTTTTTAAGGTTTAAGTATACGG
TATTAATAGGAAATCAGGTGATTTGATAACTTTTGTATTTCTTTACAAGT
TTCGatatactctaggggctgagttaggtctcgtatgcgcatcggcgtat
agtcattttttcttttgatcatgaaagtatagtccttgaagag Run BLAST on NCBI transcript from alignment at scaffold_47:471965..473357+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067457 ID=TCONS_00067457|Name=TCONS_00067457|organism=Clytia hemisphaerica|type=transcript|length=1393bp|location=Sequence derived from alignment at scaffold_47:471965..473357+ (Clytia hemisphaerica)
AATACAGACGTAGCATTTGAGAGTGCAATTAATCTATTTTCAAATGACAA
CTTAACTAGTAATctcttaaatcttttttaaccATTATATGTGAAGTGTA
ATTGCTTCACTGCTCATAATAAGATTTATTTTATCATCACATCAAAGCTT
TATGTTTCTTGTTAGCCCAACAACGTAATTGATGGTCTTAAGGATAATGC
TACAACTCGAACAATATCTCTCCCTGATATATGCGTTGTAtaataaataa
ggtttttttaacTTCGTGTAGTGAAAATTGGATTAAGTTCTCCACTTCAA
GGTTAAAATGAAGAGGTGTTAAATTGAAAGAGGTCTTTTTGGATTTCTAT
TTTGTTCATCTTATTCATATTGTGTTTTGATGTCTCTTCTTTTATTTGAT
TATGGgttttctacttttctttaaGACATGGATGAAGGGGGTACAGGTGC
CAGCAGCAGCAGCAATGGAGATAGAGGGCAAaactccaaacaaaaagaaT
ATGATGAAGACGGTTGGGAAATTGTCAGAAGGTCCAAAAAACGTTGATAT
TTCCAAACCATTTTGCGTCGCGGTTGTTTGAAAAAGATTGTTCTTACCCG
TGGTGAAAGGTAGACTTTGGTTCGTCCTGGGTTTGTGTTTGGTAGACCAC
TTCATCTGGTACCCGAATACGTTGCGTTGGTAGTTGTCATCAAACGACTT
GGACAGAAACTTCTTCATTACTCGTACAAGTTATGTTTACAAGTACTCAC
TCGAGTGCAATGGAACGTTATCAATCTTATAAACTAGAAGAAGCGAGAGA
TGATTTCcccaaagaaaataaaaagtgacGTCGAAATTTTCTTTACAAAC
ATATAATAAACATTACAAACACTCTTTTCGATTATTGCAACAATGATACC
TCCCCTCTCAAAAGTgacgttgttttgattttcaatgtGGTATGCATACA
TGCAGAAACTCGATGTCAGAAAAACTCCTTACAATCTTAGATAAtgcaaa
aaatgctttttaataGAGATCGTTGTTAGTAATTAATTCCATGTGATTTC
TATCTTTTATTTGTGGCACAGACCTTGTTGTGACTGTGCGCGATGGAGAT
GAAACTTGGAACGTATATTCGCATAAACAGGTCGATGGGAAGATGATTTG
AATTTTAAGTATTATAATGTTGTTATATTTCACTTTATAACTTGGATAGA
TGTTAGATATATTTTTTGATTCACACCGTTTTTAAGGTTTAAGTATACGG
TATTAATAGGAAATCAGGTGATTTGATAACTTTTGTATTTCTTTACAAGT
TTCGatatactctaggggctgagttaggtctcgtatgcgcatcggcgtat
agtcattttttcttttgatcatgaaagtatagtccttgaagag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067457-exon-scaffold_47-1491911889:471965..473357 | TCONS_00067457-exon-scaffold_47-1491911889:471965..473357 | Clytia hemisphaerica | exon |
| TCONS_00067457-exon-scaffold_47-1510915933:471965..473357 | TCONS_00067457-exon-scaffold_47-1510915933:471965..473357 | Clytia hemisphaerica | exon |
| TCONS_00067457-exon-scaffold_47-1575043694:471965..473357 | TCONS_00067457-exon-scaffold_47-1575043694:471965..473357 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:471965..473357 + |
Blast
The following BLAST results are available for this feature:
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