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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067451 ID=TCONS_00067451|Name=TCONS_00067451|organism=Clytia hemisphaerica|type=transcript|length=1565bpRun BLAST on NCBI protein sequence of TCONS_00067451-protein >TCONS_00067451-protein ID=TCONS_00067451-protein|Name=TCONS_00067451-protein|organism=Clytia hemisphaerica|type=polypeptide|length=476bp MFRKFSSFLHKELSRVTTHSKSLPLSSSQRDAITSKCDLKDTSAETKQTERun BLAST on NCBI transcript from alignment at scaffold_47:334166..347464+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00067451 ID=TCONS_00067451|Name=TCONS_00067451|organism=Clytia hemisphaerica|type=transcript|length=13299bp|location=Sequence derived from alignment at scaffold_47:334166..347464+ (Clytia hemisphaerica) Coding sequence (CDS) from alignment at scaffold_47:334166..347464+ >TCONS_00067451 ID=TCONS_00067451|Name=TCONS_00067451|organism=Clytia hemisphaerica|type=CDS|length=15741bp|location=Sequence derived from alignment at scaffold_47:334166..347464+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00067451 vs. Swiss-Prot (Human)
Match: DELE (Death ligand signal enhancer OS=Homo sapiens GN=KIAA0141 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 2.798e-21 Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 1
Query: 559 EKKNDQNESDSHQAKLESIFEKYKETTDQCNGSFLNGLAVRYGRLDNHKQAFALFNEASELGNPNAWYNKGISYEMGLGTKKSYKKAAECYMKAGEQGHPKALYNLAS--LHYSGLLGSNEIGEGFQFMKQAADLGIAEAQLFIGLQSAKEK--DWTNAFNYFELGAKQKNASSIYNLAICYENGYGTLKNIDKAMTLYKESAEKGHALSQIQLGESFLNG 1209
EK+ D++++ S + + SI + ++ + N L + +H AF+ F +A+ G A YN G+ +E G GT + KA Y A QGH A Y A L + E +KQAAD G+ EAQ F+G+ KE D A Y L A ++ S Y+L ICYE G G +N+ +A+ Y++SA G+ +Q +L F G
Sbjct: 218 EKEQDKSKTLSLEEAVTSIQQLFQLSVSIA----FNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMG 434 The following BLAST results are available for this feature:
BLAST of TCONS_00067451 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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