TCONS_00067421 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067421
Unique NameTCONS_00067421
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067421 ID=TCONS_00067421|Name=TCONS_00067421|organism=Clytia hemisphaerica|type=transcript|length=279bp
TTGACCTTCACATATTGGTAACGATCGGACAAAAATGCTTTCATCCAACC
AAGTACCCTTCCTCTGATACCATACGCTTCGAGTTTTCTTAGTAATCTGC
GGTGTGGAACGGTGTCAAATGCCTTTGCGAAGTCGAAATAGATTACGTCA
ACAACCTAATCATTGGATATCGAGTCTACACATTTGTCTAAGTAGTGAAG
TAGTTGTGTCACTGTCGATCGTTTACCCATGAACCCATGTTGTTTGGTTG
ATAGCAATTTCTCATTCGTGAGGTGTTCC
Run BLAST on NCBI

transcript from alignment at scaffold_469:473381..473659

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067421 ID=TCONS_00067421|Name=TCONS_00067421|organism=Clytia hemisphaerica|type=transcript|length=279bp|location=Sequence derived from alignment at scaffold_469:473381..473659 (Clytia hemisphaerica)
GGAACACCTCACGAATGAGAAATTGCTATCAACCAAACAACATGGGTTCA
TGGGTAAACGATCGACAGTGACACAACTACTTCACTACTTAGACAAATGT
GTAGACTCGATATCCAATGATTAGGTTGTTGACGTAATCTATTTCGACTT
CGCAAAGGCATTTGACACCGTTCCACACCGCAGATTACTAAGAAAACTCG
AAGCGTATGGTATCAGAGGAAGGGTACTTGGTTGGATGAAAGCATTTTTG
TCCGATCGTTACCAATATGTGAAGGTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042114XLOC_042114Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067421-exon-scaffold_469-1491911889:473381..473659TCONS_00067421-exon-scaffold_469-1491911889:473381..473659Clytia hemisphaericaexon
TCONS_00067421-exon-scaffold_469-1510915933:473381..473659TCONS_00067421-exon-scaffold_469-1510915933:473381..473659Clytia hemisphaericaexon
TCONS_00067421-exon-scaffold_469-1575043694:473381..473659TCONS_00067421-exon-scaffold_469-1575043694:473381..473659Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:473381..473659 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.99154	0	1.60428	0	2.58307	0	0	1.25456	0.459497	0	2.87211	6.19747	0	0	2.62101	1.53109	5.80126	1.50096	6.31752	0	4.29902	1.19209	1.01157e-06	0.797211	3.74932	1.94625	0	0	3.324
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067421 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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