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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067419 ID=TCONS_00067419|Name=TCONS_00067419|organism=Clytia hemisphaerica|type=transcript|length=868bp
CACAGAGCAACTCAAATCGACAGACATTAACTTTTTATCCTTGCTTCGCA
AACAACTGTTTTACATctttttggacaattttgaCTCAGCTACCCTTGAA
GCGAACGGTTTTCCCACGTTATCAACATCAGAGGAAGATGCCAAGAAACA
tttaaaatggctgaaaaaacgCTTTAACCCAGAATATGCATCGAATGACA
TTTATGATATGGGTCTCAGCATTATGGAGGATAGAATTCTTGATAAGCTT
GCTTTGGTCTTACTCACCAAACCTCTCACCATCACAACAAGCTCAGATAC
TTCACAATCACCAGATCTGCCGCCCTTACAGTCACTGAACGTAATCGACA
ACAATGGGAAGTTCATCCTTCAAAAACTAACTGATCTAGTAAGCATTACA
ACGAAAATTCAGGAGGAAAATAAAGAACTCAAACAGCATATCAAAATCTT
AGAGAGAAAAATTGACCAGCTTGACCATATACCACAGTCGAATCCCAGCA
TAAAATCAACAAACCGTATCAACTCTTTAACCAAGGGAAGGGCAACCTCG
ACAATGTCATCACAACATCAGCAAGAAACACCATTGCCACAGCCCACAAC
AACTCAACAAAGCAACACAAGTAATCGACCAATCTACGGGAACAAAACGA
CTAAAACCCCAATTGCCGGCCAACCTCAACCATATTCTCTATTTGTTGGT
GGATTCGATCTAAAATTCAACAGCAATCAGGTCCGAGAAATTATCCATGA
TGAACTTAACTTTGACGTATTGAACATTTCTCCCATCAAACAGAATGGTT
ATAATCAATCTTTTCGAATTGACATCCATGTCAACGACAAAGCTAGGGCT
CTTGACCCAAGATCATNN Run BLAST on NCBI protein sequence of TCONS_00067419-protein >TCONS_00067419-protein ID=TCONS_00067419-protein|Name=TCONS_00067419-protein|organism=Clytia hemisphaerica|type=polypeptide|length=289bp
TEQLKSTDINFLSLLRKQLFYIFLDNFDSATLEANGFPTLSTSEEDAKKH
LKWLKKRFNPEYASNDIYDMGLSIMEDRILDKLALVLLTKPLTITTSSDT
SQSPDLPPLQSLNVIDNNGKFILQKLTDLVSITTKIQEENKELKQHIKIL
ERKIDQLDHIPQSNPSIKSTNRINSLTKGRATSTMSSQHQQETPLPQPTT
TQQSNTSNRPIYGNKTTKTPIAGQPQPYSLFVGGFDLKFNSNQVREIIHD
ELNFDVLNISPIKQNGYNQSFRIDIHVNDKARALDPRSX Run BLAST on NCBI transcript from alignment at scaffold_469:465244..466111 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067419 ID=TCONS_00067419|Name=TCONS_00067419|organism=Clytia hemisphaerica|type=transcript|length=868bp|location=Sequence derived from alignment at scaffold_469:465244..466111 (Clytia hemisphaerica)
NNATGATCTTGGGTCAAGAGCCCTAGCTTTGTCGTTGACATGGATGTCAA
TTCGAAAAGATTGATTATAACCATTCTGTTTGATGGGAGAAATGTTCAAT
ACGTCAAAGTTAAGTTCATCATGGATAATTTCTCGGACCTGATTGCTGTT
GAATTTTAGATCGAATCCACCAACAAATAGAGAATATGGTTGAGGTTGGC
CGGCAATTGGGGTTTTAGTCGTTTTGTTCCCGTAGATTGGTCGATTACTT
GTGTTGCTTTGTTGAGTTGTTGTGGGCTGTGGCAATGGTGTTTCTTGCTG
ATGTTGTGATGACATTGTCGAGGTTGCCCTTCCCTTGGTTAAAGAGTTGA
TACGGTTTGTTGATTTTATGCTGGGATTCGACTGTGGTATATGGTCAAGC
TGGTCAATTTTTCTCTCTAAGATTTTGATATGCTGTTTGAGTTCTTTATT
TTCCTCCTGAATTTTCGTTGTAATGCTTACTAGATCAGTTAGTTTTTGAA
GGATGAACTTCCCATTGTTGTCGATTACGTTCAGTGACTGTAAGGGCGGC
AGATCTGGTGATTGTGAAGTATCTGAGCTTGTTGTGATGGTGAGAGGTTT
GGTGAGTAAGACCAAAGCAAGCTTATCAAGAATTCTATCCTCCATAATGC
TGAGACCCATATCATAAATGTCATTCGATGCATATTCTGGGTTAAAGcgt
tttttcagccattttaaaTGTTTCTTGGCATCTTCCTCTGATGTTGATAA
CGTGGGAAAACCGTTCGCTTCAAGGGTAGCTGAGtcaaaattgtccaaaa
agATGTAAAACAGTTGTTTGCGAAGCAAGGATAAAAAGTTAATGTCTGTC
GATTTGAGTTGCTCTGTG Coding sequence (CDS) from alignment at scaffold_469:465244..466111 >TCONS_00067419 ID=TCONS_00067419|Name=TCONS_00067419|organism=Clytia hemisphaerica|type=CDS|length=867bp|location=Sequence derived from alignment at scaffold_469:465244..466111 (Clytia hemisphaerica)
NNATGATCTTGGGTCAAGAGCCCTAGCTTTGTCGTTGACATGGATGTCAA
TTCGAAAAGATTGATTATAACCATTCTGTTTGATGGGAGAAATGTTCAAT
ACGTCAAAGTTAAGTTCATCATGGATAATTTCTCGGACCTGATTGCTGTT
GAATTTTAGATCGAATCCACCAACAAATAGAGAATATGGTTGAGGTTGGC
CGGCAATTGGGGTTTTAGTCGTTTTGTTCCCGTAGATTGGTCGATTACTT
GTGTTGCTTTGTTGAGTTGTTGTGGGCTGTGGCAATGGTGTTTCTTGCTG
ATGTTGTGATGACATTGTCGAGGTTGCCCTTCCCTTGGTTAAAGAGTTGA
TACGGTTTGTTGATTTTATGCTGGGATTCGACTGTGGTATATGGTCAAGC
TGGTCAATTTTTCTCTCTAAGATTTTGATATGCTGTTTGAGTTCTTTATT
TTCCTCCTGAATTTTCGTTGTAATGCTTACTAGATCAGTTAGTTTTTGAA
GGATGAACTTCCCATTGTTGTCGATTACGTTCAGTGACTGTAAGGGCGGC
AGATCTGGTGATTGTGAAGTATCTGAGCTTGTTGTGATGGTGAGAGGTTT
GGTGAGTAAGACCAAAGCAAGCTTATCAAGAATTCTATCCTCCATAATGC
TGAGACCCATATCATAAATGTCATTCGATGCATATTCTGGGTTAAAGcgt
tttttcagccattttaaaTGTTTCTTGGCATCTTCCTCTGATGTTGATAA
CGTGGGAAAACCGTTCGCTTCAAGGGTAGCTGAGtcaaaattgtccaaaa
agATGTAAAACAGTTGTTTGCGAAGCAAGGATAAAAAGTTAATGTCTGTC
GATTTGAGTTGCTCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067419-exon-scaffold_469-1491911889:465244..466111 | TCONS_00067419-exon-scaffold_469-1491911889:465244..466111 | Clytia hemisphaerica | exon |
| TCONS_00067419-exon-scaffold_469-1510915933:465244..466111 | TCONS_00067419-exon-scaffold_469-1510915933:465244..466111 | Clytia hemisphaerica | exon |
| TCONS_00067419-exon-scaffold_469-1575043694:465244..466111 | TCONS_00067419-exon-scaffold_469-1575043694:465244..466111 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:465244..466111 . |
Blast
The following BLAST results are available for this feature:
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