|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067417 ID=TCONS_00067417|Name=TCONS_00067417|organism=Clytia hemisphaerica|type=transcript|length=878bp
TTTAAAAATCAGCACTCGAGCATTTATGAGGCTATCAAGCTGTCCTTAGT
TTGTCCTTTTGGAAAATATAGAGGTCAGCAAGTCAGAATAACCAGTCACC
AGTTCAGATATTCACAGGAAAACCtatccatacagggggatggacgaaca
tttccagagggtaatccaagaaaaatttccagggggtgttttCCAAGGGG
Gtgaaaagttattctaaaatttccagggggtaaaagactgattttagttt
aaGGTATGATAagaatttttccattttccagggggtatccacacattttc
aatatttttttttatgacttgaagaGGTTCATCCACACCCATGTATGGTT
TTTTAAAGGCACAGCCCAAAGCGGTAACGAAAATAAGACGAGGGAAAACT
TTCAATTAAGTCTTTTCATGGTCTTTATTTCCAGCCATGTCCGTTCGTTG
AAGAGTTTGATGCACGTCTGATGCGGAAATTTACTCAAATCTACAATTTT
AGACCTCCGTTTACTTTCCATAAATACTATTCTGCTGTTCAATATGAGAC
CTTTCaatgattttgaaaatgtttttttttgcttttcacGATACAAATAG
GCAAGTGTGTGGTGTCAGCAGACACCATAGGGGGAGGGATGGGGCGAGGG
AGTGTGTGCTAATCGGACATATGTAAGTGCCAGGCCATCTCACATTTTAA
CAAAGTATTGATGTGACATTTGTATTGTATCCAAAGAATTTAGCCTCATG
AGAGAAATTCTTTTTGAGGTTCAAAGGGCGATAGTGTGCCATGGCACGTT
TGGGGTTGGTTCCAcacttttgaattgaaaagaGGGGGGCTGTTGGAAGA
GTGCGAGGCGATATTGTTGATGTTGGGT Run BLAST on NCBI transcript from alignment at scaffold_469:415765..416642 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067417 ID=TCONS_00067417|Name=TCONS_00067417|organism=Clytia hemisphaerica|type=transcript|length=878bp|location=Sequence derived from alignment at scaffold_469:415765..416642 (Clytia hemisphaerica)
ACCCAACATCAACAATATCGCCTCGCACTCTTCCAACAGCCCCCCtcttt
tcaattcaaaagtgTGGAACCAACCCCAAACGTGCCATGGCACACTATCG
CCCTTTGAACCTCAAAAAGAATTTCTCTCATGAGGCTAAATTCTTTGGAT
ACAATACAAATGTCACATCAATACTTTGTTAAAATGTGAGATGGCCTGGC
ACTTACATATGTCCGATTAGCACACACTCCCTCGCCCCATCCCTCCCCCT
ATGGTGTCTGCTGACACCACACACTTGCCTATTTGTATCgtgaaaagcaa
aaaaaaacattttcaaaatcattGAAAGGTCTCATATTGAACAGCAGAAT
AGTATTTATGGAAAGTAAACGGAGGTCTAAAATTGTAGATTTGAGTAAAT
TTCCGCATCAGACGTGCATCAAACTCTTCAACGAACGGACATGGCTGGAA
ATAAAGACCATGAAAAGACTTAATTGAAAGTTTTCCCTCGTCTTATTTTC
GTTACCGCTTTGGGCTGTGCCTTTAAAAAACCATACATGGGTGTGGATGA
ACCtcttcaagtcataaaaaaaaatattgaaaatgtgtggataccccctg
gaaaatggaaaaattctTATCATACCttaaactaaaatcagtcttttacc
ccctggaaattttagaataacttttcaCCCCCTTGGaaaacaccccctgg
aaatttttcttggattaccctctggaaatgttcgtccatccccctgtatg
gataGGTTTTCCTGTGAATATCTGAACTGGTGACTGGTTATTCTGACTTG
CTGACCTCTATATTTTCCAAAAGGACAAACTAAGGACAGCTTGATAGCCT
CATAAATGCTCGAGTGCTGATTTTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067417-exon-scaffold_469-1491911889:415765..416642 | TCONS_00067417-exon-scaffold_469-1491911889:415765..416642 | Clytia hemisphaerica | exon |
| TCONS_00067417-exon-scaffold_469-1510915933:415765..416642 | TCONS_00067417-exon-scaffold_469-1510915933:415765..416642 | Clytia hemisphaerica | exon |
| TCONS_00067417-exon-scaffold_469-1575043694:415765..416642 | TCONS_00067417-exon-scaffold_469-1575043694:415765..416642 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:415765..416642 . |
Blast
The following BLAST results are available for this feature:
|
