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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067410 ID=TCONS_00067410|Name=TCONS_00067410|organism=Clytia hemisphaerica|type=transcript|length=1948bp
GGTATTTGCATTGGTGTATCACCAATATAATAAAACTGAAGGCTAGAGGG
AGATCTTCCACCTTTTTCGGGTAAGAGTAAGTAATGTCTCGAATTTGCGT
CACATTCGGATggcggattgaatctagcattttctttgtttttgcatggt
atattttcaaaaaactggcGGTAATTGAATGATTCTTTCAATCTAGAATT
TGCGTGAAAATCACATGGACCATGAAACTCAGGAAATAAGTAGCTTTGAT
AAGGAGattcacttttattttttctcattgGTGTTCACCGCTAACGTCAA
GGCCCTGATTGATCTAATCTGGAACAGAAGCTTTGAGCATTATGCATCAT
TGGTTAAGATCAATAAGCCGTGTAAATCTTATGAAACGAGAAAATGATTG
GAGTTCAGTGGTAAATAAATTGAACTTCTTCTAGAAAACCTCGTTCGCGC
CCGtttgtaaaaaatgattgattgattacAAGAGGCAAAAATCACAAGAC
TGAGAAAACTGAGCAAGAACCAGCAAATCTATACAAATTTTAAAAGTAAT
CGAAGTCATGCGTGTATAAGCTCTCAAGAAAAAGGTCTTAAACAGAAGAC
AAGGGGTAGATTAACATTTCTCGAACAGAGAAAACAAAATTGTcaatgat
ttaaaaaagaatcaaTTTGTTAAAGCTCAgttggttgatatttttattga
gGGAGATTTGAGGTTTTGTAGAGTTTTGATATGGTAATTGGATAGAGGTT
AACAAGAAGTTAACATTGTCTCTATGGACCAGGGTGGCACAATGGATTTT
GTACATAAATTCCACCTGACGGATGCTCTCGTTGCCAACATTGGCCTGAG
ACTCTTTAGAGGATGTTAATAAGTTTTCTAGAGGTCTTGATTTGTTTAAT
ACAAGCTTTGAGGTGATTGTGTAATAACTATTTTTGAAGCGATTTGATAA
GTTGACACTTGATGAATCCACGTCACAGTTTATCACGCCCTGGACGCCAA
TGGTATATTGTGCAATCCAGGGCGGAAGCAAAGTATTGAATAGTTGTTAT
GTTCTCATCTTCCCCGCCAGATGGTTTCAaagaaagtaaaagtaaaaaca
TTTCATAATTTGATAATCAAGGTATTCTTCTTCTTCTAAGGAAGGATATG
TTGTGAGTGAAGGAATAGAACATTTCAGAAGAAGGAGAAAATCACACAGG
GTCGAGATTCACTCAGTGTGTGCGTGAATGCCTGTTGAGTAATTTTCTTT
CCTTCAAAATACAAGATGGTGAAAAGGGAGTTTCTTCATTTATGTAACCa
cattcttcttcttctttcttttagtCTATCAAATAAAAAGGAGCACCCTG
ATTTATCCCGATATTAATTCCAAGATGAATCCGATAAATACCGGGTTGCT
TGTGACGAATGAGCGAAATTGGAGAGCTCAACAGAGtcaaggaaaaaata
aaaaagctgcATACACGGGTCCATCGAATCAAGGAGATAAAAACATGCCT
AAGTCGACGCGGGTTGTCAACAAAGGAGCACGAAATGATGGAGGTAACAA
AAAAccgaaaaaggaagaaaaaggcAGTAAAGTTatcgatgaaaagaaaa
agaaacatatCAAATGTGAAATTATGTAACGGGAAATGTATCCCATATCA
TTTGTGATTGTATTAATGGACAGATTTATGTGGGGAAATTTGGAGGAGAT
TTCATGAATCCAGTGAAACGAGGTTCGTTGAGAGAAGAATTTCACAGAAA
AACCTTCGTGTGACAAGGTGGTGGGGATTcttaaagttaaaaaagaaaat
gtatcATCCAATGTGAAAGGACTCCTAAAGATATCTGTATTGTAATTGAT
AAACCTTTGACTCCAAGCCTTGATGTCAAGCATGGGACGAATGAAGCACG
ACTATCTTCTTtcaaatagaagaaaaaaataacactGCAGCCGAcgtg Run BLAST on NCBI transcript from alignment at scaffold_469:90544..92491 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067410 ID=TCONS_00067410|Name=TCONS_00067410|organism=Clytia hemisphaerica|type=transcript|length=1948bp|location=Sequence derived from alignment at scaffold_469:90544..92491 (Clytia hemisphaerica)
cacgTCGGCTGCagtgttatttttttcttctatttgaAAGAAGATAGTCG
TGCTTCATTCGTCCCATGCTTGACATCAAGGCTTGGAGTCAAAGGTTTAT
CAATTACAATACAGATATCTTTAGGAGTCCTTTCACATTGGATgatacat
tttcttttttaactttaagAATCCCCACCACCTTGTCACACGAAGGTTTT
TCTGTGAAATTCTTCTCTCAACGAACCTCGTTTCACTGGATTCATGAAAT
CTCCTCCAAATTTCCCCACATAAATCTGTCCATTAATACAATCACAAATG
ATATGGGATACATTTCCCGTTACATAATTTCACATTTGatatgtttcttt
ttcttttcatcgatAACTTTACTgcctttttcttcctttttcggTTTTTT
GTTACCTCCATCATTTCGTGCTCCTTTGTTGACAACCCGCGTCGACTTAG
GCATGTTTTTATCTCCTTGATTCGATGGACCCGTGTATgcagctttttta
ttttttccttgaCTCTGTTGAGCTCTCCAATTTCGCTCATTCGTCACAAG
CAACCCGGTATTTATCGGATTCATCTTGGAATTAATATCGGGATAAATCA
GGGTGCTCCTTTTTATTTGATAGactaaaagaaagaagaagaagaatgtG
GTTACATAAATGAAGAAACTCCCTTTTCACCATCTTGTATTTTGAAGGAA
AGAAAATTACTCAACAGGCATTCACGCACACACTGAGTGAATCTCGACCC
TGTGTGATTTTCTCCTTCTTCTGAAATGTTCTATTCCTTCACTCACAACA
TATCCTTCCTTAGAAGAAGAAGAATACCTTGATTATCAAATTATGAAAtg
tttttacttttactttcttTGAAACCATCTGGCGGGGAAGATGAGAACAT
AACAACTATTCAATACTTTGCTTCCGCCCTGGATTGCACAATATACCATT
GGCGTCCAGGGCGTGATAAACTGTGACGTGGATTCATCAAGTGTCAACTT
ATCAAATCGCTTCAAAAATAGTTATTACACAATCACCTCAAAGCTTGTAT
TAAACAAATCAAGACCTCTAGAAAACTTATTAACATCCTCTAAAGAGTCT
CAGGCCAATGTTGGCAACGAGAGCATCCGTCAGGTGGAATTTATGTACAA
AATCCATTGTGCCACCCTGGTCCATAGAGACAATGTTAACTTCTTGTTAA
CCTCTATCCAATTACCATATCAAAACTCTACAAAACCTCAAATCTCCctc
aataaaaatatcaaccaacTGAGCTTTAACAAAttgattcttttttaaat
cattgACAATTTTGTTTTCTCTGTTCGAGAAATGTTAATCTACCCCTTGT
CTTCTGTTTAAGACCTTTTTCTTGAGAGCTTATACACGCATGACTTCGAT
TACTTTTAAAATTTGTATAGATTTGCTGGTTCTTGCTCAGTTTTCTCAGT
CTTGTGATTTTTGCCTCTTgtaatcaatcaatcattttttacaaaCGGGC
GCGAACGAGGTTTTCTAGAAGAAGTTCAATTTATTTACCACTGAACTCCA
ATCATTTTCTCGTTTCATAAGATTTACACGGCTTATTGATCTTAACCAAT
GATGCATAATGCTCAAAGCTTCTGTTCCAGATTAGATCAATCAGGGCCTT
GACGTTAGCGGTGAACACcaatgagaaaaaataaaagtgaatCTCCTTAT
CAAAGCTACTTATTTCCTGAGTTTCATGGTCCATGTGATTTTCACGCAAA
TTCTAGATTGAAAGAATCATTCAATTACCgccagttttttgaaaatatac
catgcaaaaacaaagaaaatgctagattcaatccgccATCCGAATGTGAC
GCAAATTCGAGACATTACTTACTCTTACCCGAAAAAGGTGGAAGATCTCC
CTCTAGCCTTCAGTTTTATTATATTGGTGATACACCAATGCAAATACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067410-exon-scaffold_469-1491911889:90544..92491 | TCONS_00067410-exon-scaffold_469-1491911889:90544..92491 | Clytia hemisphaerica | exon |
| TCONS_00067410-exon-scaffold_469-1510915933:90544..92491 | TCONS_00067410-exon-scaffold_469-1510915933:90544..92491 | Clytia hemisphaerica | exon |
| TCONS_00067410-exon-scaffold_469-1575043694:90544..92491 | TCONS_00067410-exon-scaffold_469-1575043694:90544..92491 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:90544..92491 . |
Blast
The following BLAST results are available for this feature:
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