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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067405 ID=TCONS_00067405|Name=TCONS_00067405|organism=Clytia hemisphaerica|type=transcript|length=798bp
GTAACTTTCTCTCGCCGTTTGGACAAATAAATTGCAAAGGCCTAGTGTTG
AGTTTGTCAATCCAGATGTAACCTTGGTAACAAAAGAGTAATGGCGGAgg
ataaaaacaacaacaataacaatgaGGTGAAAATGACGGCAACCGAACAT
TCTTACCTGCTTGAAGAGTACGTCGAAGAAGAGCGAGAGCAGACGGTCAc
caccaaaatcaaaacaaaaaagaagcaaaaaagagTAACTTTCAGTCCTT
CTGTTTTCGAGAATGAATTAGatagtgatgacgtcatcgaaaagaCCGAA
AAAATAATGAATCTTGAGCAAGATCGTTCAAGGTTTTGTGttctgttttg
aaaataaaaggaaaCGAGGATCGTTTTTGCTGATTGTCGTTCGACTTGCA
AAAGGAGAGATTTCAAGACATTTAAGATATGTATAGATAGGCGTTTCGCT
AAAGACTCTTGCAGTCTTTTCAACAGATATTGATTGACTGGGTGTGAATA
ATGTTTTGCTGCAAAAAAGAATGACTCTAAAACATTGAatcatccaaaaa
aaatttcatatcttaagtaataaaatttttataaaatcttAGAATTTTAT
TGTATGatatatttttgttgttttaaacAAAGGCTGAGAATGACAATAac
aatttccttcaaaatgagCATCTTAATTCGAAGCCATTGATTGGTCGATC
CACTCGCGAAAATTACTGACACGTGCAAAAACTGTATAAGCCTGTGCAGT
AGAGCACGACGAGTCTCCCCAGCTGACAGCTCCGTGTAATTCCCAATC Run BLAST on NCBI transcript from alignment at scaffold_469:518993..520006- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067405 ID=TCONS_00067405|Name=TCONS_00067405|organism=Clytia hemisphaerica|type=transcript|length=1014bp|location=Sequence derived from alignment at scaffold_469:518993..520006- (Clytia hemisphaerica)
GTAACTTTCTCTCGCCGTTTGGACAAATAAATTGCAAAGGCCTAGGTGAG
TTGACAACCGTTTTTCAAATGCTTCATATTTCTAGCCTTACTCGAGTTCT
TATCCCTCTTTAAAGGGTTATTTTGAAACGACAAATTGAGAAAAGTTCTT
CGATGTTATTGTACTTTCGAGTGTGAGTTATGAAAAGCTTTTTTGAAAGG
TGCCAGTGTTGACAAAATGGACTGTTTGAATGTCAAGACCAAGGTATATT
GTGCATTTTAGTGTTGAGTTTGTCAATCCAGATGTAACCTTGGTAACAAA
AGAGTAATGGCGGAGGATAAAAACAACAACAATAACAATGAGGTGAAAAT
GACGGCAACCGAACATTCTTACCTGCTTGAAGAGTACGTCGAAGAAGAGC
GAGAGCAGACGGTCACCACCAAAATCAAAACAAAAAAGAAGCAAAAAAGA
GTAACTTTCAGTCCTTCTGTTTTCGAGAATGAATTAGATAGTGATGACGT
CATCGAAAAGACCGAAAAAATAATGAATCTTGAGCAAGATCGTTCAAGGT
TTTGTGTTCTGTTTTGAAAATAAAAGGAAACGAGGATCGTTTTTGCTGAT
TGTCGTTCGACTTGCAAAAGGAGAGATTTCAAGACATTTAAGATATGTAT
AGATAGGCGTTTCGCTAAAGACTCTTGCAGTCTTTTCAACAGATATTGAT
TGACTGGGTGTGAATAATGTTTTGCTGCAAAAAAGAATGACTCTAAAACA
TTGAATCATCCAAAAAAAATTTCATATCTTAAGTAATAAAATTTTTATAA
AATCTTAGAATTTTATTGTATGATATATTTTTGTTGTTTTAAACAAAGGC
TGAGAATGACAATAACAATTTCCTTCAAAATGAGCATCTTAATTCGAAGC
CATTGATTGGTCGATCCACTCGCGAAAATTACTGACACGTGCAAAAACTG
TATAAGCCTGTGCAGTAGAGCACGACGAGTCTCCCCAGCTGACAGCTCCG
TGTAATTCCCAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067405-exon-scaffold_469-1575043694:519962..520006 | TCONS_00067405-exon-scaffold_469-1575043694:519962..520006 | Clytia hemisphaerica | exon |
| TCONS_00067405-exon-scaffold_469-1575043694:518993..519745 | TCONS_00067405-exon-scaffold_469-1575043694:518993..519745 | Clytia hemisphaerica | exon |
| TCONS_00067405-exon-scaffold_469-1510915933:519962..520006 | TCONS_00067405-exon-scaffold_469-1510915933:519962..520006 | Clytia hemisphaerica | exon |
| TCONS_00067405-exon-scaffold_469-1510915933:518993..519745 | TCONS_00067405-exon-scaffold_469-1510915933:518993..519745 | Clytia hemisphaerica | exon |
| TCONS_00067405-exon-scaffold_469-1491911889:519962..520006 | TCONS_00067405-exon-scaffold_469-1491911889:519962..520006 | Clytia hemisphaerica | exon |
| TCONS_00067405-exon-scaffold_469-1491911889:518993..519745 | TCONS_00067405-exon-scaffold_469-1491911889:518993..519745 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:518993..520006 - |
Blast
The following BLAST results are available for this feature:
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