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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067403 ID=TCONS_00067403|Name=TCONS_00067403|organism=Clytia hemisphaerica|type=transcript|length=1676bp
gttgaccaaattttgaaatttcaggggAAAATTCACAGATTTCCAAAAAT
CCCCTCCCATGGAGACAGCcatgaaagtttttcaaaactgGAAGCCGTTT
TGACGTTTTGAAGCAGTTTTGCCTTCAGATTCAAATAAAGGGGCAAACAC
TCCTGTGAATCTTCATTGGGAACACTCTAGGTGGTGAgatcttgttttca
ttttattgtttgtttATCATTTCAGTTGATGAGAAGTCAATGATGGTGTT
TGATCGCTTTGAAGAGTGGGAACGTCAAAATGAAtccaaaacacaaaata
ataAAGGCAAAAATGCGAAAAGTTATGGTATAGAAGAACAATACGGaatc
aagaagaagaaaagggaaCCTGCAATCCCTACCACCACAACGTTAGataa
atttaatcaaaaaatcaagaaattgaaTAAACACAAAAAAGTTGAGAATT
GGCTTAAAAGTAATGACGCAATTATTTCCGTACCCAAAGATACTCGAGAA
AAGCCCAAAGAACGGAAAAGGTCTTCTTCTTCTGTAGAATCGAGCACTAA
ACCTGCCCCACCCAAATGCAATAAACATATACCAATGAACACCTCCTCCT
CCAAGAAGCGAGAATCCTCTGAtgctaaaaagaagaaaaaggacACTATT
TTAATCGAAAGCACGGACGAGGATAATATTTCGGACACTTTTCAAACTTA
CGAAAGAAAGGAAGTCAAAGTGAGTAGGTTTAAAGAAGAGGATGTATTCG
ATAATTTTGTTACCAAATCAAAAGTTGCACCACCGATCAAAAGAACAATA
TCCAATCCGACTACACTGAGGGAGAAACAAGCCAAAATCCCTAAAAAGAC
TCAACAGAATAGCTCAATGAATTTGAGTGTGAAAAAAGAGATCAAGTCAG
AGCTGAGTGAAGTGATTGTTAAAACGGAGAATCACAATAGCGATGAGATG
GACCTTTATGATAACGAGACTCAGGACTCACGACAACCCATCGAGGTGGA
AGAGACTATTACTGTCAAAAAAGAAGTACGCAGTCCACAGAAGAGAGTCA
TGCCTGCTTCATTTATCTTGAAACCTACAACTCAAGCTTCCACTCAGACG
GATATTGCTGCTAATAATTTGAAAGAACTTATGAAATGTGAGGGAGTTCC
GGATAAACTGAAAAGTGANTGAAACCTACAACTCAAGCTTTCACTCAGAC
GGATATTGCTGCTAATAATTTGAAAGAACTTATGAAATGTGAGGGAGTTC
CGGATAAACTGAAAAGTGAAGCAGTCTTTAAATTCACCGTTAAATTAAAG
AATGATCAAATTTGTCAAAGAGTTGAGAGGAAGGTGTTTGATTCCAAAAA
GAACAATTTGGCTTCATGGTTTGATTATATTTTAGACAATTACATTTCAA
AACACGAATACGAGGGTGAGGACGGTTATAACAGTTTCATCACCATGGAT
TCCATGTTCCGTGTGTTCTCGTGTGATGACGAGAAGAAAGTGCCAGGGAT
GTTGGAAGTGCTAACGGATGGCTCCAATGAGGATAATTGGATGCGAGGGA
TCAGGGAGCCGATCAGAATACACACAGTGATTGATCGACAACTTTATGGA
AACATCTTGGGAAATGATGCTCAAAGGTTACCTGATTTGATCATTACCAG
ACTCTTTCCGATTGACTCTATAGGTT Run BLAST on NCBI transcript from alignment at scaffold_469:445200..447152- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067403 ID=TCONS_00067403|Name=TCONS_00067403|organism=Clytia hemisphaerica|type=transcript|length=1953bp|location=Sequence derived from alignment at scaffold_469:445200..447152- (Clytia hemisphaerica)
GTTGACCAAATTTTGAAATTTCAGGGGAAAATTCACAGATTTCCAAAAAT
CCCCTCCCATGGAGACAGCCATGAAAGTTTTTCAAAACTGGAAGCCGTTT
TGACGTTTTGAAGCAGTTTTGCCTTCAGATTCAAATAAAGGGGCAAACAC
TCCTGTGAATCTTCATTGGGAACACTCTAGGTGGTGAGATCTTGTTTTCA
TTTTATTGTTTGTTTATCATTTCAGTTGATGAGAAGTCAATGATGGTGTT
TGATCGCTTTGAAGAGTGGGAACGTCAAAATGAATCCAAAACACAAAATA
ATAAAGTATGCTTCCATTTAAAGACAATCATTATGAGATATTTTAAAGAA
GGCTATGCGTAATATTTCCTAATGAAAGTATTTTTTTTGGCCTCAACCTT
AGTCAAAGTATTGGCACGCTTTAAAAGGACTTTCCAGTGTCGCATGAAAA
GATTTCCTGTTTAAGAATCGAAAAAAATAACAGTTTGTGCCTGTCCAAAA
TTACCAGCGAACTTGTTGAAAATTAAAAATACTGAGTAGAGATGGGGGAA
ACTTAATTGTAATTCTTCATTCTTTTTGTCAGGGCAAAAATGCGAAAAGT
TATGGTATAGAAGAACAATACGGAATCAAGAAGAAGAAAAGGGAACCTGC
AATCCCTACCACCACAACGTTAGATAAATTTAATCAAAAAATCAAGAAAT
TGAATAAACACAAAAAAGTTGAGAATTGGCTTAAAAGTAATGACGCAATT
ATTTCCGTACCCAAAGATACTCGAGAAAAGCCCAAAGAACGGAAAAGGTC
TTCTTCTTCTGTAGAATCGAGCACTAAACCTGCCCCACCCAAATGCAATA
AACATATACCAATGAACACCTCCTCCTCCAAGAAGCGAGAATCCTCTGAT
GCTAAAAAGAAGAAAAAGGACACTATTTTAATCGAAAGCACGGACGAGGA
TAATATTTCGGACACTTTTCAAACTTACGAAAGAAAGGAAGTCAAAGTGA
GTAGGTTTAAAGAAGAGGATGTATTCGATAATTTTGTTACCAAATCAAAA
GTTGCACCACCGATCAAAAGAACAATATCCAATCCGACTACACTGAGGGA
GAAACAAGCCAAAATCCCTAAAAAGACTCAACAGAATAGCTCAATGAATT
TGAGTGTGAAAAAAGAGATCAAGTCAGAGCTGAGTGAAGTGATTGTTAAA
ACGGAGAATCACAATAGCGATGAGATGGACCTTTATGATAACGAGACTCA
GGACTCACGACAACCCATCGAGGTGGAAGAGACTATTACTGTCAAAAAAG
AAGTACGCAGTCCACAGAAGAGAGTCATGCCTGCTTCATTTATCTTGAAA
CCTACAACTCAAGCTTCCACTCAGACGGATATTGCTGCTAATAATTTGAA
AGAACTTATGAAATGTGAGGGAGTTCCGGATAAACTGAAAAGTGANTGAA
ACCTACAACTCAAGCTTTCACTCAGACGGATATTGCTGCTAATAATTTGA
AAGAACTTATGAAATGTGAGGGAGTTCCGGATAAACTGAAAAGTGAAGCA
GTCTTTAAATTCACCGTTAAATTAAAGAATGATCAAATTTGTCAAAGAGT
TGAGAGGAAGGTGTTTGATTCCAAAAAGAACAATTTGGCTTCATGGTTTG
ATTATATTTTAGACAATTACATTTCAAAACACGAATACGAGGGTGAGGAC
GGTTATAACAGTTTCATCACCATGGATTCCATGTTCCGTGTGTTCTCGTG
TGATGACGAGAAGAAAGTGCCAGGGATGTTGGAAGTGCTAACGGATGGCT
CCAATGAGGATAATTGGATGCGAGGGATCAGGGAGCCGATCAGAATACAC
ACAGTGATTGATCGACAACTTTATGGAAACATCTTGGGAAATGATGCTCA
AAGGTTACCTGATTTGATCATTACCAGACTCTTTCCGATTGACTCTATAG
GTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067403-exon-scaffold_469-1575043694:446848..447152 | TCONS_00067403-exon-scaffold_469-1575043694:446848..447152 | Clytia hemisphaerica | exon |
| TCONS_00067403-exon-scaffold_469-1575043694:445200..446570 | TCONS_00067403-exon-scaffold_469-1575043694:445200..446570 | Clytia hemisphaerica | exon |
| TCONS_00067403-exon-scaffold_469-1510915933:446848..447152 | TCONS_00067403-exon-scaffold_469-1510915933:446848..447152 | Clytia hemisphaerica | exon |
| TCONS_00067403-exon-scaffold_469-1510915933:445200..446570 | TCONS_00067403-exon-scaffold_469-1510915933:445200..446570 | Clytia hemisphaerica | exon |
| TCONS_00067403-exon-scaffold_469-1491911889:446848..447152 | TCONS_00067403-exon-scaffold_469-1491911889:446848..447152 | Clytia hemisphaerica | exon |
| TCONS_00067403-exon-scaffold_469-1491911889:445200..446570 | TCONS_00067403-exon-scaffold_469-1491911889:445200..446570 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:445200..447152 - |
Blast
The following BLAST results are available for this feature:
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