TCONS_00067371 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067371
Unique NameTCONS_00067371
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length993

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067371 ID=TCONS_00067371|Name=TCONS_00067371|organism=Clytia hemisphaerica|type=transcript|length=993bp
gcaaaaataaaagattaaGAAAATAGAACTAAATAAATGAAGAGAATGAG
ATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTGGGTTCGCATCAA
CCTTGCTTTGGAGTATTGCATCAAAGGAGCGCTCATTGATGTACTTCACA
ACGCGCACAATGACACTTCTTATACTGGACTTCCAACTTGTCCAAAACAA
CTTCATCAAATATTCGTGCAATGCAAACAAAACAAGAAACACGAGTTGGA
CAAAGTGTTGAAGAAAGAATAATGGGAAATATTGTGTCCACAAAATGGAT
CATCCAACCCAGAAGATTGGGATATCACCTTATTGATTGCTGTATTGAGG
TCAGTGGTTGGATTGCAACCTGCTGGAGGATGGAAAATCAAATCTCTTCA
ACCCAACGATCAATCTATTGGAGCTTTCTTGTTTTTGATCAGAAATTTAA
GAAATGAATTAATGCATGGTTCAATCAATGCAGTACCAGATTTACAAGCT
TTCAAACAACTGAGAGCTCGAATGGAGAACATTTTACTGGGATTGAAATA
TAAGGATATGCAAATGTTTTATGATTTGGAAAGTTGTCCATTGGATAAAC
ATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGACCAAGAAGTGGAT
TTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCGA
ACAAACTAATCAATGGATCAAAACTTATTTGAAACAATTATCTTCGGCAA
AAGCTGACAAAACTGACGTCGAAGATTTAGCCAAGTCAATGAATAGTGGA
CTGAATACGAAAGCTGATAAAGATGAAATGGATGATTTATCCACGTCAAT
GAATATGAAAGCTGATAGAGTTGAAATGGATGaattgtcCAAAGTGATGG
ATTCGAAATTGACGTTGAAAGCTGATATGTGCCAAATTGATGaCTTGAGC
AACAAAGTTGACCAACTATCAAAGGAATCAAAATCTATAAAGG
Run BLAST on NCBI

protein sequence of TCONS_00067371-protein

>TCONS_00067371-protein ID=TCONS_00067371-protein|Name=TCONS_00067371-protein|organism=Clytia hemisphaerica|type=polypeptide|length=177bp
MHGSINAVPDLQAFKQLRARMENILLGLKYKDMQMFYDLESCPLDKHVLV
ISRMVTNLDQEVDLLRNEASDNSNAIKNIEQTNQWIKTYLKQLSSAKADK
TDVEDLAKSMNSGLNTKADKDEMDDLSTSMNMKADRVEMDELSKVMDSKL
TLKADMCQIDDLSNKVDQLSKESKSIK
Run BLAST on NCBI

transcript from alignment at scaffold_469:553479..571717+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067371 ID=TCONS_00067371|Name=TCONS_00067371|organism=Clytia hemisphaerica|type=transcript|length=18239bp|location=Sequence derived from alignment at scaffold_469:553479..571717+ (Clytia hemisphaerica)
gcaaaaataaaagattaaGAAAATAGAACTAAATAAATGAAGAGAATGAG
ATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTGGGTTCGCATCAA
CCTTGCTTTGGAGTATTGCATCAAAGGAGCGCTCATTGATGTACTTCACA
ACGCGCACAATGACACTTCTTATACTGGACTTCCAACTTGTCCAAAACAA
CTTCATCAAATATTCGTGCAATGCAAACAAAACAAGAAACACGAGTTGGA
CAAAGTGTTGAAGAAAGAATAATGGGAAATATTGTGTCCACAAAATGGAT
CATCCAACCCAGAAGATTGGGATATCACCTTATTGATTGCTGTATTGAGG
TCAGTGGTTGGATTGCAACCTGCTGGAGGATGGAAAATCAAATCTCTTCA
ACCCAACGATCAATCTATTGGAGCTTTCTTGTTTTTGATCAGAAATTTAA
GAAATGAATTAATGCATGGTTCAATCAATGCAGTACCAGATTTACAAGCT
TTCAAACAACTGAGAGCTCGAATGGAGAACATTTTACTGGGATTGAAATA
TAAGGATATGCAAATGTTTTATGATTTGGAAAGTTGTCCATTGGATAAAC
ATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGACCAAGAAGTGGAT
TTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCGA
ACAAACTAATCAATGGATCAAAACTTATTTGAAACAATTATCTTCGGCAA
AAGCTGACAAAACTGACGTCGAAGGTGAGATACATTGGTTTTCAATGTCA
TCGAAAGCACATTTACTTTCTTACCTCTTTTGAATTTATGACATCCTAAG
AGATGAATCTTGTTAACTTTTTACCTGTTGACACTGAATCTGTTGTCATT
GAATATCACTATTTGTTTTACTCTAGATTTAGCCAAGTCAATGAATATGA
AAGCTGACAAAGATAAAATGGatggtatgtttttttttttggttaatact
ttttcaaaaaagaataaaaagtgaTCAAATCCCAAGAAGCTTTGCCTTGG
ATGGTTGTGTAAGAGAAATTAGGAGGCTTCATCACTCCACACCCTTCTGA
AGTAGAACTGAtctttataaaaactttgacGTCAATCAAAAAAGCTGACA
TGttgattttcattattttttatctagaatTGTCCACAGTGATGGATTCG
AAATTGACGTTAAAGGCTGACAAATGCCAATTTGATGGTAAAGTTATACC
AGAAAAGTTTGTTGTGTTTTgtcgaatgtttttttctccttttttgagGT
GGTCCGCTAGcaacttttttcatcaaaatacaacTTTGGCATAATTCAGA
TTTCAAATGTATCTAGtcgatgaaaaatgtttcaaatgttCCGAGATCTT
TAATTTCCTCTGTAATCTACacgaattttggtttttattcttttaaaggA
AGTTCCAGAATAAAAAGGCCTTTTCTGACGAGTATCATTTTTTTTAACAG
AATTGAGCAACAAAGTTGACCAGCTATCAATTGAATCAAAATCTGTAAAG
GGTAAAACTTGagctatgattttttttttgctatccatgccttattatta
tttttattcttttaatcGAATGTTGCTGAATAAAAAggctttttctgata
aatatcAATTATTTTAACAGAATTGAGCAACAAAGTTGACCAGCTATCAA
TGGAATCAAAATCTGTAANCTGACGAGTATCATTTTTTTAACAGAATTGA
GCAACAAAGTTGACCAGCTATCAATGGAATCGAAATCTGTAAAGGGTAAA
GCGTTAgttatgatttttattttctctacCCATGCTCAAGCCTGAATTTA
TTCAAAGAAactttattggacctaccccggtggagtggaggtcctataaa
ttaacctgtgttcgtccgttcgtctgttaccaacttttctcaggattgaa
tcataggaatctatTGAGTTTTGGttcaaaggtgcaaaatggtggtggct
aAAATGTGACAAAgcgcgattttcgaaaaaaaattttgtaggcaaatttg
ggccaaaaaacggctaaaaaacgggttttttggactttgtgaaaaatttg
aacattaattttttctgatttttcgcatgaaagtagggtaccatcatagg
taaaagatggctctagcagattttcgcaaaaaaaattttttggctcaaaa
aaacgcatgtttatctttaagaatcactattaataagcatacatcaatgt
tcttagtcaaattactcaatttttttatgagatagatgtttttttgctca
cgaagtcttgaatatgaaagaatatttcaacagcacgaaatgggcttttc
cagaaaaaaaccgtgcaccccctgttgaggagtccATTTCCATTCCAAGG
TGGTATGGTTTGAAATTCCATAGCAGTAGACAAAATTCCGTCATAAATaa
gtggaattccatgggggtaatgaatgaaaatctttaaaaatttgctATTC
CAGTGGGATATGACCCTAAAATTGCCTGAAATTCCAAGGCGGTaattcac
aaaaggttggagctcctcaacagggggtgtacggtttttttctggaaaag
cccaattttggtttctaatcgtttttttttataagaaacaaacgactaat
tttaatagattgccactgtttgtgttctgaatgattgtttaatggtcaca
ttatgtagatatcaattataaatgtgttaaatgcataaccaggtaggtcc
gttTTTGTTATTTGTTATCCTTGTTTTGTATTCCTTCTAGATACAACAAA
GACACATTGGAATTTGCCAGAGCCTGTTTCCATCTTCTTTGGACGAGAAA
GTTTGATTGAATCTTTTCACTTGAAACTTCAGCAAAATCAAGCGGTTGCT
TTGAGTGAAATGGGAGGTGTGGGGAAAACACAAACTGCTGCATAGTTCGT
TCAAATGCACAAAGATGAATATTGGAAGATATTTTGGATTTCTGCTGTCA
GCCTCAAGAAATCTTTGAGCGAGATTTTGTGTGCATTTGGTTGTAAACAA
CTAATTCTTGATGAACCTTCGATGGAAACtctgattttcattttcctctC
TAAGATTTGTGAAGGTTCCAAAGGATCGCTGGTTGTATTGGATGACGTCA
CTGAGGTCACAAAAGACGTCACCTCATTCATTCGaaatgtgaaagaaaaa
atcagcTTATTGTTGACATCCCAATTGAAAGATTGGGAAGATTATGGTTT
GATTCAAATTGCTGTTCCATGTTTCCAAGAACAAGAATCCATTGGCTTCT
TACAGAATGAACTTTCTTCAGCCAGCCAACATGAAATCTCCATTTTAGCG
AATCGTTTACAATCATTACCTTTAGCCCTTCACCAAGCCATTTGTTACAT
CAAAAAACATAAAGTTCCTCTACACAAATACATCGAACAATTTGAAGCAT
GCAGAGTAAGCGTTTTGGGAATGAAAATCAATTCCTTTACTGAATATGAC
AAAACATTGTTGACAGTTTGGGATTTGGCTTTTGCGAAGATTCGGGTCGA
ATCAAAGAATGCTCTTTTGATCTTGGGAATGATGGCTTTCATGGACAAtc
gaaaaatcaacaaaaagacTTTCAGTTATTTTGATAAAGTTGACGAATTT
GAATTAAATGAAATCATCAATCTGCTTTGTCAATACTCATTGGTCAACGA
ACGGAACGAATGTTTAGAGATTCACAGTCTTGTGCAAAAAGTTATCCGAT
ATCGTATTGAACAAAAACAATTTGTTGAGGGTGAATGTCCGTTGACACTG
CTTGAAGTTGTTCTTTTGAAAATCGAGTCTTCTCTTGAAGATTTGGTTGC
AAATGGTGACTACGAGGATTTATGGTACATTCATGTTTTTCGTTTGATCA
TGAGTGGTGCACTAAAAACTATCAACTTTGATGTTAACCAGGTGTTAAAT
ATCGCGACAGGCAGAATGGAGTTGGAAAACTTATACCTACTTGCTGAAct
tctttcaaaagatttgtTAGAACAATATAGGTTGTCTCGAGATGTGGAAA
CTTTTCACGGTTTATTGCTTGTTTATCGTCGTTTCATGGACGCGTCAATT
CTAATAGGTTTATTTAATATGAATGAGATTATTGCTTTTGAAAAAGAGTT
TTCCTCAGAGCTTGAAGAACATTGTGAAGAAGTTTACCAGTGGAAGCTAC
AGCAAGCTCAGGCATATAATATACATGGACAAATGTCGTTATACGAAGAT
ATCGTTCGAAATTTATTCAATGAACTGGTCATAAAGAAAGGATTTGATAA
TATTAAATTAATATTGGCAAGGCATCTCAATGTAAGGGATGTTGAAGTTT
TGTTGAACTCCGTTGACACAAATAATGTCAGTGACATGAACTTTCTGGTG
TATTATGATACAAAATGTTCTTTATACATCAAGAACGGTTGCTTTGACTT
GGCTGAACAAGTTATGAAGAATTGGAAAGAACATTTACACAGAAAACAAT
TTTCTCGAATGTTGCACTTTAACTTCACAAAAAAGAATTGCTATTTACTT
TACAAGAAAGGAAATTACAACGAAGCATTGCTAGCTTGCGATGAACTTAA
ACGTGATTTTTTTACTGATGCAGATATTTTAGCATTCGAAGCAttgattt
tgatcaaattaAGAAAGTTCAACGACGCAGAAATTTTACTTGATGCCTTT
GACCAACACAACAAGATTATCATTGAAATCAGCTCATACCTGAAATTTCG
AAAGCATGACTTTGAAGCAGTAGAAAATCTTCTCGCCGAAAAGGAAGGTG
AGCGCCAgtcaaaacttttgttttgggtAAAGGGATATGAGAAACTGCAT
GGACAATTcgaaaataataaatcaaatGAATTGGTTGAACGATGTTtgca
aatgaaaaaatttgtaaCTGATTTATTTCAAGTACATTTGGATTCGATTC
ATCTTTGAAATGCAATTTCATCGAATTATGATTAGAATCGGATCTTTGGG
AACTACTCCAATCTTTGTGCTTTGGCTAAACTGATAAGTTTTTTTAAGTG
ACTGTAATGTAATTTTTGCATTGACTTGGTCTGTAAAATCAGAAGTagtg
tatttctttttaattatgaaaatatttgaggGGGTGGTTTCAGGGGGCAC
CTGATTCCGCCATTCGGTCATTTCGGGACGATTTTTCGCCAAGGTCCATT
TTTTCGGACCAAAACAGCTCAATTTCTCGTCTCCGAAAGTGGACCTAAAT
TCTGCACATCCGTCTAGATTTCTAATCGTCTTGAATTTTATTGTTAAATT
AGAGGATTACATGTTAGTAGGGGGAAATTTGTAAAATCGCTCGATTTTTT
TAGTCAAAGCACTTGTTATACATTTTTGGAAagctaaggggtaggggaat
caaaataacttgggtgccaattttctttcggacactttggtgtgattttc
ggacaaatacgacggtctcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNagcttgagaaaacggagacctgttgtatatttttg
gaaagctctcaaaaaattaagattagtgatatattgcgagtataggcgat
ttcagtacctaactcgagatattgagcttccgaaagcgcaaaaactggac
aaaacagctgttttggctgaaaaacagtgaaaaacactgtttttaaggat
taatatctcgaattatgtaaagaaatcacctatactcgcaatatatcact
aatcttaattttctgagagctttccaaaaatatacaacaggtctccgttt
tctcaagctaaaatttttattaatatttcactctatgatttttgcctgga
accgtcgtatttgtccgaaaatcacaccaaagtgtccgaaaaaaaattgg
cacccaagttattttgattcccctaccccttggctttccaaaaatgtata
acaagtgctttgactaaaaaattcgagcgacctcaaaaaaaacgaacaaa
tttccccctactatgttatgaaataaaattataGGTAGGCGAAATTTTTA
GATTGCAACATTCTAAGGATATTTTGAAGAAAGTTGGTTGTTTGGGAGCA
ATTTTATTATTGATTTCTTTTAGattagaaataaaaattttgcatatttt
tttaaaataagatttAAAATTCACGATTTCCTTTGTTTGCTAGCTAAAAC
GGTCCAGCATCACcctgattttcttcttttaataaaagtgatttttttag
aACAATAAGGTGAGGCGatcaaaaataagaatatttcagttatatacctt
aaatctcaaaattatgataaaaaagaTAACGAAAAGCATCTCGGGGGGAT
ACTTAGACAAGTGAAGGTACGGTATGTGATATGGTATGTaccgcccttaa
gggtggcTTTTTGGAACCTGGCAGTCCCTGTAATGGTttgaaaagtcaga
aaattggaTCTCTGTCCCATTAAGTGTCGAAATATTTTACCCCTAAaaca
tcgaaatttggtcaaattagtctaaataagggttgtaaaattcattttct
cCCTTTTAGGAGTGTCCGAGGATCGAAAGCCTGGCGGTACCCCCCTTCAT
CCTGTAGAcctacacaggaaaaaattgtcgatttccaaggttggaaattc
aatatttttgggttggaaattttggttttataattgaaggttggaaattt
gagcgattaccttaagctgatttggaaaacgtaaattacccataggtttt
gtagaataagccaatgcccttgaaaaatcaagtgaaaaaaacccatgtag
aaatgacatttttccaaggctggttggaaaacatgactttttgggtggga
aatttttattttccaaacagtttgggaattgaaaaaaaaggtcaaaaatc
gatgtgaaaatacatatttttgtaaatttgatacctcaggTTGANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNttcgctcaaaactgttttgatgtatagctaacc
tagatattaggctataatgtgagcagtcaagctgtaagtttccgtcaggt
gaggcgtctcttcggagcggtcaatcgcagtgagttcgcacagtgaagca
catagggtacttgtgtcatagtttcaaatagtgccctgctgagctatgtg
agtgatctaagatcaaccacgtatctgtgcgaacaataatgagagattga
ccgggagccatcgagcctaggctagcgagtgactgttcacaaaaacaaaa
accttgtttaagatctcttttccacatcNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTTGGCTTTTTCAaccccgattttcgaaaatt
ccaaccttgttcaagcttggattttggctttttttccaactgaattttaa
aaaattccaaccttgttagatttagattttggcttttttcaacctggatt
tacgaaaattccaaccttgttaaatttggattttggcttttttcaacctg
gatttacgaaaattccaaaccatggaaaatgcaaaatttccaaccttgga
gaatgtcccacattttcaggttggattttccatttgattttatctttttt
ccaactaagaaaacttgaaatttccaaccttggaaatcgaaaattttttc
ctgtgctaGTACCCCTCGTCCTGGGGGAAAGCATATATCGATTGATGATG
TTTTGCTCCTGttaaaggaatcttcgaaacgTCATAAAAGTGAACATAGT
GTTAAGATAAAgcgtttttgaaactttaatgAAATCTCTTTATTCCGAAT
AATGCAGTATATACATTAGTACTATTTTATTCCACTTTCTATAATCATTT
TACTAAACCTATTTTATTAAATGTTTCCCAAaatgaccatagttttgaaa
ctGAAATGTCATAATTTTTCTTTAGAACCTTTGAAGTTAGACCCCTGAGT
TAGCTCCCCcctgtttttttcaaacatacATTTGTTATACTTATtatatt
tttcagcaaaaacaaaagattaagaaaataagaagaaataaaTGAAGAGA
ATGAGATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTGGGTTCGC
ATCAACCTCGCTTTGGAGTATTGCATCAAAGAAGTGCTCATTGATGTACT
TCACAACGTGCACAATGACACTTCTTATACTGGACTTCCAACTTGTCCAA
AACAACTTCATCAAATATTCGTGAAATGCAAACAAAACAAGAAACACGAG
TTGAACAAAGTGTTGAAGAAAGAACAATGGGAAATATTGTGTCCACAAAA
TGGATCATCCAACCCAGAAGATTGGGATATCACCTTACTGATTGCTGTAT
TGAGGTCAGTGGTTGGATTGCAACCTGCTGGAGGatggaaaatcaaattt
cttcaACCCAACGATCAATCTATTGGAGCTTTCTTGTTTTTGATCAGAAA
TTTAAGAAATGAATTAATGCATGGTTCAGTCAATGCAGTACCAAATTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGGATTGAAATATAAGAATATGCAAATGTTTTATGATT
TGGAAAGTTGTCCATTGGATAAACATGTGTTGGTTATTTCTCGAATGGTC
ACCAATTTGGATCAAGAAGTAGATTTGTTGCGAAATGAAGCAAGCGATAA
TTCGAATGCTATCAAAAATATCGACCAACATAATCAATGGATCAAAACTT
ATTTGAAACAATTATCTTCGGCAAAAGCTGAGAAAACTGACGTCGAAGGT
GAGTTGCATTGGCTTTAACTTTGTCGAAATCACATTTACTTTCTTaactg
ttttgaatttttgacattttaggaGCTGAATCTTGTTAACCTTTTTAACC
TCTTGACACTGAATTTTGCGGTCCTTGAATAACACCATTTGTTTTACTCT
AGATTTAGCCAAGTCAATGAATAGTGGACTGAATACGAAAGCTGATAAAG
ATGAAATGGATGGTATGTTTGTTTCTTTACTTGTTTTATATTTCGGAGAA
AATGGTATCTACCTGATGATTGTCTAATAAAAAGTAGGAGGCATCGACAA
GTTGACGTTCTAAACAAAATTGctccttttgaaaaatattgatttctTCT
TGTTATCTATGTTATAGTTTTTCGACATCCTCTGTAATATATAAGAAGct
ttttgtaatatattttcacTATCTTTCTGTCTGAATAGacattttctgat
aaatatcaCTATTTGTTTTACTCTAGATTTATCCACGTCAATGAATATGA
AAGCTGATAGAGTTGAAATGGATGGTATGTTTTATTTCGTTTACTTGTTT
TATATTTTGGAGAATGTGAACAATTATCTTCTGCAAAAGCTGATAAAAAT
GACGACGAAGATGAGATAACATATTTATTTCCTGCCTCTTTTGAATTCTT
TGTAATGTAGGAGCTGAATCTTGTTAACTTTTTTACTTCTTGACACAGAT
TTTTTGGTCATTGAATAACACCATTTGTTTTCCTCTAGATTTAGCCAAGT
CAATgataaaacagataaaaaaattcactccatttaagaattagtgaata
agaattAGTGAACAAGATTCACTAACTAACAAAAAGGGTGTGGTGGTAAT
CCTACACAACTAAGAGAGGTCCACCACGCCCAAGAAGAACAACAACACTG
AGGCGATGATGatgtgattacttttatttgtCTCGGGACGAGGAACTGAC
CGGTCACGCCCTTAAATATACGGTTGAACATCAAACACCCTTCTCATGAA
ACAGACATTTTACAAATGGAAGATTGGAACAATCAATGTACGAACTTGCA
AAGACGACCAAAAACTCGAACGTGTCGTGAAGGAGGTCCACAAAGCGAAT
CTCGAAATATGTGCGCTTCAAGAGGTTAGACGTTTAAATCAAGGATCTGC
AACTATCAAATGCGACAATACCAAATACGAAATTCATTGGTCTGGTCACT
CTCTCAAAAGACAACATGGAGTTGGATTTATCATCAAAATAGACCCTAAT
GTTGAACTCGTTCAAGTTGAATACGTTAACGCTCGGATCATTGTGTTTCA
AGCCAAGGTTTACGGATGTCTACTCAAAGTTATAACTTGCTATGCACCTA
CGGAGGAAAGTAGTGACAGTTCAAAAGACTTATTTTACAGAACTCTTCAT
AAACAATTCTTGAATACACCACCAAAATTCAAAGTTATTTGTCTTGGCGA
CTTTAATGCTACAACCTCAGCTTCATGGTATAATTCTTCCCTCAGGGAAA
ATAGTGTCATTGATAACTTGACTGTGAATGATAATGGTGAACGGTTTCAC
AATTTGATAAGAACTCAGAATTTATCAGCATTAAACACATGGTTCAACCA
TAAACGCTGCCGGCGAATCACATGGCATTCCCCAGATGGTACAACAAAGA
AAGTTTACGATTTTATACTTAGTTGCTCTTGGTTACGCCAGTACACTACA
AACTGTAGAGTGTATAATTCGTTTGATTTCGACAGCGATCATCGATTGGT
TATTTCGAATATGAACACCCCAGGAAACAAATCATCTCGTGCGAGAAAAA
GGAAACCAAAGACTATTCGCAAAAAGCTCAACTATAAACTACTAGAAAAC
GACGATATGTGTGAAAACCTGATTTCGAAATTCTCTAATTCCTGGGATAA
CATTCAGATAAACAATCTTGAAAACAATGATATTAACGATTTGATTATTA
AAAATATCGAAACTGCTGCTTCAGAGACATTACCTGAAACTGTTGAACAA
AAACTTCACCAACCAtggcaaaatgatgaaaaattaagaGAACTTTATTG
TAAAAAAGATGAACTCTTCAAAAAGAATGCTAATCCAAAAGATTTGCAAA
AACTTCGTAAACAAATTCGAAAACGATCCAGGCAACTCAGAAATGAACAC
TTCAAGGCCGAAGCTGAGAAACTTGACGTACTTGCTGCAACAAGAGAACT
TGACAAATTATTCACCACTGCTAAAAGACAAACTACGACTTTAAATACCT
CGAGTAGCAACTCTTCATGTCCTCCTGAAAAACTgttaaaacatttcaaa
ctcCATTTCAATCCAAATAATGATAACATGAGACCCAATGAACTTGATAA
CGTACCAGATTTTGTTGAATCACTTCGTAAAATTTCATCGACGATCACTA
TTAACAATGAACCTCCCACTATTGATGAAATTACTGAACACTTACATAAA
CTTAGAAACAAGAAAGCAAACAATGACATTGATTCAGAATTATTAAAGAA
ATGTGAATGTCCAATCCTTCTCGATGCTATTCATCAAATGACTACAAACG
TATGGGAAAACTTCGACATTCCTACTGCCTGGGGAAATTCCCGATTGAAA
ACATTGTGGAAAGGAAAAGGGTCAAAGAAAGACCCCTCAAAGTATAGAGG
CTTGAGCATAGGTTCAACTATATGTAAATTGATCGTGAACATTATTTTGA
GTAGACTCCAGCCTTGGTACGAGGCACAATTGACAGACGAGCAAAACGGA
TTCAGACAGAACCGGGGAACAACAGATGGGATTTACAACATCAAACGTAT
ACAACAGATCTCCAATCGAAAACTACAGCCACTCTACCTTGTGTTTGTCG
ACCTCTCGGCAGCTTTCGATCACATCCCGCGCAAATGGATGTTTGATTCA
ATTAAACTTCGTTTCAAAGATGATCAAAGCTCACTCCTGATTGACATCCT
TGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGACTAGTCATCACGAATGAGAAT
TTGCATGCACTTTGTGGAACTCGTGACGTCACTGACTTTATCAAAAGTCA
ACAAGCGAGCTATGTGGCACATGTAATAAGAATGCCTAACGAACGGTCGT
TGAAACAATTAATGTTTAACGATGACACAAATCGTAAACGTGGTCGACCT
TCCAAGACACTGTTAGACCAAGTTGTTTCTGATAAAGATGTTTCAATTGA
TGTATTTTGTAATAGATCATTAAATGAGAGGGTGTGAGATTGCTCTAGGG
TTCCCAACAACACAGACAATAATCGTCCAGTGTCTTTGGTAGCCCTACAG
CCAATCCATCCTTAACAAGAAAGAACGACACAACCAACTACCCCAGGAAA
CGCTGCCGTCGTTTATCATGtcagggccggcgaatcggttttaaaagtga
gggggctaaatgatatagtgactaaggaggcccNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgggccggaaaatt
tttgaaattatggtaCTCTACATTGGCTTAGAATTGgcctaaatttaatt
tttatgaagttattggaatgaaaaatcaaagaagTTAGGTGTCTTTTTAT
ACTGATAATCGCCAAAGAATATATGGTTATTATATAATAACAAAATGAAA
CCTATAAGTAAAAAAAGCGGACTTTTACATGTTCAAAATTCTTAAGTAAA
GTTAGATTTAAAGTGTGCTTTTAACAGGCAGCAGTAAGCATACAGTAATC
AAAGATTAAAATTGTCCAAAGTAATTAAAGCGATGCTCTCGAGTTGACAC
AAACTCTCTACCAACTTCATTTAAATCAAGTTTATCCGTTAGATTTTTAT
GGATGTGGAGCAAAGAAAGATTGTTAAACCGTTTTGGCTTCATTGTTGAA
CGTAGCCAAGTCTTCATCCTGCGTGCTGTAGAAAAAGATCTATCTTAACT
TTTCCTCCTTATCAGTACACAATATCCAAAACAATAAACAAATACAATTT
TATCGGAGACAATTGGATTATCTTTGTAACGCAAGGCCTGTAATAGATAA
TTATACGTAATATAAATAGATAATATGAATAAAGTTAAACGAATTACATA
ATCACAAGaaatttattatatattatCTATAAACAAGATCAATTATATGA
CGAACAAACATTTGTCTCATCTCTCCGATCAAGTATGTGTATGTATGTCT
CTAAATTAAGTCCGTCTTAAATCATTTCTCAATATATCTCAATTTTCTTC
GTTTTATGGTGACCGTTGTCTATGTGTCTTGATCTTCCTTATCTTTGTAT
AATTATAAATAAACCTAAGGAACTCCCTGAACTAACGAGCTCCTCCCTTG
GACGAAAACCTACCTCCCTCGAGCTATAGGGGTCGGCCTTCGTTCGCCAA
TCTGACCGATCTTTTGGCAGGACAAAAACCTTGGGtcgttaaataaataa
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NNNNNNtttttctttttttcttttttttctctcaccctctctttttcttt
ctctctcttttttttttttttttgcaaaaaagtaaaCTAGCCCCCCGGTT
TCGCCGGCCCTGCATGTACTGGAAGTTAGGAGGCTTCATCACTCTACACC
CTTTTGAAGTGAAAATGATCTTTATAACAACTTTGACGTCGCTCAAAAAA
GCTGACACGttgattttcattatttttttagaattgtcCAAAGTGATGGA
TTCGAAATTGACGTTGAAAGCTGATATGTGCCAAATTGATGGTGATTATC
TTGTTgtatttttcaatcttttccatTTCTCATCTTTTGAGATGGAGTCC
ATTCGATGAAAAGTGTTTCAAGTGTTCCAAGATCTTTACCTTTACCTATA
ATTAGTCTGCACAAAGtttgttttattcttttaaaGGAATGTTGCTGAAT
AAAAAGGCTTCTTCTGAcgagtataatttttttaacagaCTTGAGCAACA
AAGTTGACCAACTATCAAAGGAATCAAAATCTATAAAGG

Coding sequence (CDS) from alignment at scaffold_469:553479..571717+

>TCONS_00067371 ID=TCONS_00067371|Name=TCONS_00067371|organism=Clytia hemisphaerica|type=CDS|length=2655bp|location=Sequence derived from alignment at scaffold_469:553479..571717+ (Clytia hemisphaerica)
ATGCATGGTTCAATCAATGCAGTACCAGATTTACAAGCTTTCAAACAACT
GAGAGCTCGAATGGAGAACATTTTACTGGGATTGAAATATAAGGATATGC
AAATGTTTTATGATTTGGAAAGTTGTCCATTGGATAAACATGTGTTGGTT
ATTTCTCGAATGGTCACCAATTTGGACCAAGAAGTGGATTTGTTGCGAAA
TGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCGAACAAACTAATC
AATGGATCAAAACTTATTTGAAACAATTATCTTCGGCAAAAGCTGACAAA
ACTGACGTCGAAGATTTAGCCAAGTCAATGAATAGTGGACTGAATACGAA
AGCTGATAAAGATGAAATGGATGATTTATCCACGTCAATGAATATGAAAG
CTGATAGAGTTGAAATGGATGaattgtcCAAAGTGATGGATTCGAAATTG
ACGTTGAAAGCTGATATGTGCCAAATTGATGaCTTGAGCAACAAAGTTGA
CCAACTATCAAAGGAATCAAAATCTATAAAGATGCATGGTTCAATCAATG
CAGTACCAGATTTACAAGCTTTCAAACAACTGAGAGCTCGAATGGAGAAC
ATTTTACTGGGATTGAAATATAAGGATATGCAAATGTTTTATGATTTGGA
AAGTTGTCCATTGGATAAACATGTGTTGGTTATTTCTCGAATGGTCACCA
ATTTGGACCAAGAAGTGGATTTGTTGCGAAATGAAGCGAGCGATAATTCG
AATGCTATCAAAAATATCGAACAAACTAATCAATGGATCAAAACTTATTT
GAAACAATTATCTTCGGCAAAAGCTGACAAAACTGACGTCGAAGATTTAG
CCAAGTCAATGAATAGTGGACTGAATACGAAAGCTGATAAAGATGAAATG
GATGATTTATCCACGTCAATGAATATGAAAGCTGATAGAGTTGAAATGGA
TGaattgtcCAAAGTGATGGATTCGAAATTGACGTTGAAAGCTGATATGT
GCCAAATTGATGaCTTGAGCAACAAAGTTGACCAACTATCAAAGGAATCA
AAATCTATAAAGATGCATGGTTCAATCAATGCAGTACCAGATTTACAAGC
TTTCAAACAACTGAGAGCTCGAATGGAGAACATTTTACTGGGATTGAAAT
ATAAGGATATGCAAATGTTTTATGATTTGGAAAGTTGTCCATTGGATAAA
CATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGACCAAGAAGTGGA
TTTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCG
AACAAACTAATCAATGGATCAAAACTTATTTGAAACAATTATCTTCGGCA
AAAGCTGACAAAACTGACGTCGAAGATTTAGCCAAGTCAATGAATAGTGG
ACTGAATACGAAAGCTGATAAAGATGAAATGGATGATTTATCCACGTCAA
TGAATATGAAAGCTGATAGAGTTGAAATGGATGaattgtcCAAAGTGATG
GATTCGAAATTGACGTTGAAAGCTGATATGTGCCAAATTGATGaCTTGAG
CAACAAAGTTGACCAACTATCAAAGGAATCAAAATCTATAAAGATGCATG
GTTCAATCAATGCAGTACCAGATTTACAAGCTTTCAAACAACTGAGAGCT
CGAATGGAGAACATTTTACTGGGATTGAAATATAAGGATATGCAAATGTT
TTATGATTTGGAAAGTTGTCCATTGGATAAACATGTGTTGGTTATTTCTC
GAATGGTCACCAATTTGGACCAAGAAGTGGATTTGTTGCGAAATGAAGCG
AGCGATAATTCGAATGCTATCAAAAATATCGAACAAACTAATCAATGGAT
CAAAACTTATTTGAAACAATTATCTTCGGCAAAAGCTGACAAAACTGACG
TCGAAGATTTAGCCAAGTCAATGAATAGTGGACTGAATACGAAAGCTGAT
AAAGATGAAATGGATGATTTATCCACGTCAATGAATATGAAAGCTGATAG
AGTTGAAATGGATGaattgtcCAAAGTGATGGATTCGAAATTGACGTTGA
AAGCTGATATGTGCCAAATTGATGaCTTGAGCAACAAAGTTGACCAACTA
TCAAAGGAATCAAAATCTATAAAGATGCATGGTTCAATCAATGCAGTACC
AGATTTACAAGCTTTCAAACAACTGAGAGCTCGAATGGAGAACATTTTAC
TGGGATTGAAATATAAGGATATGCAAATGTTTTATGATTTGGAAAGTTGT
CCATTGGATAAACATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGA
CCAAGAAGTGGATTTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTA
TCAAAAATATCGAACAAACTAATCAATGGATCAAAACTTATTTGAAACAA
TTATCTTCGGCAAAAGCTGACAAAACTGACGTCGAAGATTTAGCCAAGTC
AATGAATAGTGGACTGAATACGAAAGCTGATAAAGATGAAATGGATGATT
TATCCACGTCAATGAATATGAAAGCTGATAGAGTTGAAATGGATGaattg
tcCAAAGTGATGGATTCGAAATTGACGTTGAAAGCTGATATGTGCCAAAT
TGATGaCTTGAGCAACAAAGTTGACCAACTATCAAAGGAATCAAAATCTA
TAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042091XLOC_042091Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067371-exon-scaffold_469-1491911889:553479..554252TCONS_00067371-exon-scaffold_469-1491911889:553479..554252Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1510915933:553479..554252TCONS_00067371-exon-scaffold_469-1510915933:553479..554252Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1575043694:553479..554252TCONS_00067371-exon-scaffold_469-1575043694:553479..554252Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1491911889:562881..562940TCONS_00067371-exon-scaffold_469-1491911889:562881..562940Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1510915933:562881..562940TCONS_00067371-exon-scaffold_469-1510915933:562881..562940Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1575043694:562881..562940TCONS_00067371-exon-scaffold_469-1575043694:562881..562940Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1491911889:563205..563252TCONS_00067371-exon-scaffold_469-1491911889:563205..563252Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1510915933:563205..563252TCONS_00067371-exon-scaffold_469-1510915933:563205..563252Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1575043694:563205..563252TCONS_00067371-exon-scaffold_469-1575043694:563205..563252Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1491911889:571410..571469TCONS_00067371-exon-scaffold_469-1491911889:571410..571469Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1510915933:571410..571469TCONS_00067371-exon-scaffold_469-1510915933:571410..571469Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1575043694:571410..571469TCONS_00067371-exon-scaffold_469-1575043694:571410..571469Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1491911889:571667..571717TCONS_00067371-exon-scaffold_469-1491911889:571667..571717Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1510915933:571667..571717TCONS_00067371-exon-scaffold_469-1510915933:571667..571717Clytia hemisphaericaexon
TCONS_00067371-exon-scaffold_469-1575043694:571667..571717TCONS_00067371-exon-scaffold_469-1575043694:571667..571717Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067371-proteinTCONS_00067371-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:553479..571717 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.61625	0.258833	0.251697	0	1.65938	0.771389	1.46392	0.212096	2.10668	4.01505	2.7161	3.14617	6.08255	3.33112	4.60006	5.82884	2.78355	3.39505	3.91725	3.24729	1.19638	1.76318	1.98655	2.15417	5.20047	3.5054	4.62921	2.6196	1.85738	0.857639
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067371 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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