TCONS_00067366 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067366
Unique NameTCONS_00067366
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3450

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067366 ID=TCONS_00067366|Name=TCONS_00067366|organism=Clytia hemisphaerica|type=transcript|length=3450bp
TTTAGCCACGTCAATGAATATGAAAGCTGACAAAGATGAAATGGATgAAT
TGAGCAACAAAGTTGACCAGCTATCAATGGAATCGAAATCTGTAAAGGAT
ACAACAAAGACACATTGGAATTTGCCAGAGCCTGTTTCCATCTTCTTTGG
ACGAGAAAGTTTGATTGAATCTTTTCACTTGAAACTTCAGCAAAATCAAG
CGGTTGCTTTGAGTGAAATGGGAGGTGTGGGGAAAACACAAACTGCTGCA
TAGTTCGTTCAAATGCACAAAGATGAATATTGGAAGATATTTTGGATTTC
TGCTGTCAGCCTCAAGAAATCTTTGAGCGAGATTTTGTGTGCATTTGGTT
GTAAACAACTAATTCTTGATGAACCTTCGATGGAAACtctgattttcatt
ttcctctCTAAGATTTGTGAAGGTTCCAAAGGATCGCTGGTTGTATTGGA
TGACGTCACTGAGGTCACAAAAGACGTCACCTCATTCATTCGaaatgtga
aagaaaaaatcagcTTATTGTTGACATCCCAATTGAAAGATTGGGAAGAT
TATGGTTTGATTCAAATTGCTGTTCCATGTTTCCAAGAACAAGAATCCAT
TGGCTTCTTACAGAATGAACTTTCTTCAGCCAGCCAACATGAAATCTCCA
TTTTAGCGAATCGTTTACAATCATTACCTTTAGCCCTTCACCAAGCCATT
TGTTACATCAAAAAACATAAAGTTCCTCTACACAAATACATCGAACAATT
TGAAGCATGCAGAGTAAGCGTTTTGGGAATGAAAATCAATTCCTTTACTG
AATATGACAAAACATTGTTGACAGTTTGGGATTTGGCTTTTGCGAAGATT
CGGGTCGAATCAAAGAATGCTCTTTTGATCTTGGGAATGATGGCTTTCAT
GGACAAtcgaaaaatcaacaaaaagacTTTCAGTTATTTTGATAAAGTTG
ACGAATTTGAATTAAATGAAATCATCAATCTGCTTTGTCAATACTCATTG
GTCAACGAACGGAACGAATGTTTAGAGATTCACAGTCTTGTGCAAAAAGT
TATCCGATATCGTATTGAACAAAAACAATTTGTTGAGGGTGAATGTCCGT
TGACACTGCTTGAAGTTGTTCTTTTGAAAATCGAGTCTTCTCTTGAAGAT
TTGGTTGCAAATGGTGACTACGAGGATTTATGGTACATTCATGTTTTTCG
TTTGATCATGAGTGGTGCACTAAAAACTATCAACTTTGATGTTAACCAGG
TGTTAAATATCGCGACAGGCAGAATGGAGTTGGAAAACTTATACCTACTT
GCTGAActtctttcaaaagatttgtTAGAACAATATAGGTTGTCTCGAGA
TGTGGAAACTTTTCACGGTTTATTGCTTGTTTATCGTCGTTTCATGGACG
CGTCAATTCTAATAGGTTTATTTAATATGAATGAGATTATTGCTTTTGAA
AAAGAGTTTTCCTCAGAGCTTGAAGAACATTGTGAAGAAGTTTACCAGTG
GAAGCTACAGCAAGCTCAGGCATATAATATACATGGACAAATGTCGTTAT
ACGAAGATATCGTTCGAAATTTATTCAATGAACTGGTCATAAAGAAAGGA
TTTGATAATATTAAATTAATATTGGCAAGGCATCTCAATGTAAGGGATGT
TGAAGTTTTGTTGAACTCCGTTGACACAAATAATGTCAGTGACATGAACT
TTCTGGTGTATTATGATACAAAATGTTCTTTATACATCAAGAACGGTTGC
TTTGACTTGGCTGAACAAGTTATGAAGAATTGGAAAGAACATTTACACAG
AAAACAATTTTCTCGAATGTTGCACTTTAACTTCACAAAAAAGAATTGCT
ATTTACTTTACAAGAAAGGAAATTACAACGAAGCATTGCTAGCTTGCGAT
GAACTTAAACGTGATTTTTTTACTGATGCAGATATTTTAGCATTCGAAGC
AttgattttgatcaaattaAGAAAGTTCAACGACGCAGAAATTTTACTTG
ATGCCTTTGACCAACACAACAAGATTATCATTGAAATCAGCTCATACCTG
AAATTTCGAAAGCATGACTTTGAAGCAGTAGAAAATCTTCTCGCCGAAAA
GGAAGGTGAGCGCCAgtcaaaacttttgttttgggtAAAGGGATATGAGA
AACTGCATGGACAATTcgaaaataataaatcaaatGAATTGGTTGAACGA
TGTTtgcaaatgaaaaaatttgtaaCTGATTTATTTCAAGTACATTTGGA
TTCGATTCATCTTTGAAATGCAATTTCATCGAATTATGATTAGAATCGGA
TCTTTGGGAACTACTCCAATCTTTGTGCTTTGGCTAAACTGATAAGTTTT
TTTAAGTGACTGTAATGTAATTTTTGCATTGACTTGGTCTGTAAAATCAG
AAGTagtgtatttctttttaattatgaaaatatttgaggGGGTGGTTTCA
GGGGGCACCTGATTCCGCCATTCGGTCATTTCGGGACGATTTTTCGCCAA
GGTCCATTTTTTCGGACCAAAACAGCTCAATTTCTCGTCTCCGAAAGTGG
ACCTAAATTCTGCACATCCGTCTAGATTTCTAATCGTCTTGAATTTTATT
GTTAAATTAGAGGATTACATGTTAGTAGGGGGAAATTTGTAAAATCGCTC
GATTTTTTTAGTCAAAGCACTTGTTATACATTTTTGGAAagctaaggggt
aggggaatcaaaataacttgggtgccaattttctttcggacactttggtg
tgattttcggacaaatacgacggtctcaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNagcttgagaaaacggagacctgttgta
tatttttggaaagctctcaaaaaattaagattagtgatatattgcgagta
taggcgatttcagtacctaactcgagatattgagcttccgaaagcgcaaa
aactggacaaaacagctgttttggctgaaaaacagtgaaaaacactgttt
ttaaggattaatatctcgaattatgtaaagaaatcacctatactcgcaat
atatcactaatcttaattttctgagagctttccaaaaatatacaacaggt
ctccgttttctcaagctaaaatttttattaatatttcactctatgatttt
tgcctggaaccgtcgtatttgtccgaaaatcacaccaaagtgtccgaaaa
aaaattggcacccaagttattttgattcccctaccccttggctttccaaa
aatgtataacaagtgctttgactaaaaaattcgagcgacctcaaaaaaaa
cgaacaaatttccccctactatgttatgaaataaaattataGGTAGGCGA
AATTTTTAGATTGCAACATTCTAAGGATATTTTGAAGAAAGTTGGTTGTT
TGGGAGCAATTTTATTATTGATTTCTTTTAGattagaaataaaaattttg
Run BLAST on NCBI

transcript from alignment at scaffold_469:546567..559620+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067366 ID=TCONS_00067366|Name=TCONS_00067366|organism=Clytia hemisphaerica|type=transcript|length=13054bp|location=Sequence derived from alignment at scaffold_469:546567..559620+ (Clytia hemisphaerica)
TTTAGCCACGTCAATGAATATGAAAGCTGACAAAGATGAAATGGATggta
tgttttgttttgtttcaaaagATTCTGAAATATGGACTAGCTCGCTAAGA
TTAAATGTAGCGTTTTGTTTAATGATTCCAGTCTGCAAGTGCTGGGGTGG
GGTGTCACTAGTGGCCGTcaatatagatagatagaagtTCTATGGACCTT
TTGTTAGGCGTGACGTGGCATGTTGGATTGTCGCTGTGTGGTATCTACCT
ATTCttaacttcagttgagctagaatctgagaatgtctgtctgtgtgtct
gtctgtccgtctgccccaaaactttggggcagcctggagacttcaaaaat
gttcgattaagctgaaattttgcacatttgttccttgggtgaatatctga
gggtatttcttttatttttttcaaaaactttgatttttggggcctgggga
caagtttttcgccagaacgaggctaaaactttggggcagcctggagactt
caaaaattgttcgatttggctgaaatattacacacttgttccttgggtga
atatctgagggtatttctttcatttttcaaaaattttgatttttcgggCC
TGGGggcgagtttttcaccaaaacgaggcgaAGACTTtgggggcagcctg
gagacttcaaaaatttttcgatttggctgaaattttgcacacttgttcct
tgggtgaatatctggggttctGCAACTGGACCTATGAATAGTTTGAAGGC
ACtaaagttgagcccagtgcgttgctcACGTTCGACTATATAACAATTAA
CTATAAAAACACTCAACAATCgattcattttttcaatgaCACATCAATGG
ACAGGATATCCATTGCTTCAAATAATTTATTGGTAATTGATAATTTGATT
ATGAGATTTAGGAAGCCTAGATAGGATACCATTTTAGCTCCAATTCTAAT
CAGTGGTGAAAACATTAGGTAATGACTCCACACGATAGCCTGATAGTAGT
TCAATTTCCATGTGTTTAATTTTTATCTTACAGTGTTTCTTGAAACTAAG
TGTCCGCGCGATAAGCCTGAAAGTACACATGCAAACAATAGGTtacaaag
tctaaaaatatcaaatagcCTAGAGATTGTGTATATACTTTCTGGCACTG
GTATAGAAAAATCAATATATAAAAATCAAAGTTGATCTAACAGTTTACTA
AAAGGCTATTGTGAGGagtcattacgtaatgttttNTGATCTAACAGTTT
ACTAAAAGGCTATTGTGTGGagtcattacgtaatgtttttgTCGCCAATC
ATAACTAGGTTTAAATGGTATCCTAACTAGCAAAACGTCTATTACATTCA
ATTGATCGATTATTCAACGATTGGCTCTAAGATGATCTACAGATCGATTG
TTAAACGGTTGCAAGTTCAATTCATATTTCGATCAATATTAATATTCAAG
ATTTTAGAATAGGCTCAATCACCGTTAAATTATCGATTGGAAAATGTATC
GATTGTGCGAGTCTGGTTTATAAGAAATGGAAGTCAATAAATATTGATCA
ACCTGCTCGAAATTCTCAAAATGTGTAACTCCACGTTTCAATGATATTTC
TACCGGGTGTCCCGGAAAAAAGTccccctctttgaagtgaattttctcga
gttgtATGAACTTTGAAAGCATCAATTNcccagaaaaaagtccccctctt
tgaagtgaattttctcgagttctatgagCTTTGAAAGCATCAatcctttt
gcattggaaaaaggaacgataaacttaaattttgaggggtcatttgttaa
atttagtcaactagataaaaagttatggtctaaatgctaaaaaattactt
ttcaaaaaaatcgaaacaaTGCGAAAAATTAGGGTTTTAAGAGTCACTTT
TTCGCCTTGTCTCTCTAATGGTAACTTTATTCTCTGTTAGGGCCGGTTTT
CGCACCTCCGGTTTTACATACTTTTGACATTCTTCAACCCTAGTACTTCT
TGGTTgtttaatttgattatttcatcGATGAATAATCAAACACTATACCA
AATCGTCTTGTCTATTATTGAAATAAGTATCTTGTTCTTTTTAATAGAAT
TGAGCAACAAAGTTGACCAGCTATCAATGGAATCAAAATCTGTAAAGGGT
AAAGCTTTAGctatgatttttattttctctatccacgcttattattattt
ttattatgtaAAAGGAATGTTGCTGAATAAAAAGGCCTTTTCTGACGAGT
ATCATCTTTTTAATAGAATTGAGCAACAAAGTTGACCAGCTATCAGTGGA
ATCAAAATCTGTAaagggtaaagttttagttATGATTCTCATTTTTAATA
TCCATTCTTAAACTTAAAACTCGCACCGATGAACAATACCggtaaaactt
tacaaattcaATCAATCTATTCAAAAAAATGACCTTCTTTTCTTTGTTGG
ACATAACTTTagggaggtcctataaattaaccttgtTATGTtagtccgtc
cgtctgttataagcttttctcgggattagCTCAttagatttttgtgattt
ttcgcACAATGATTTGAAATGGTAATTCCCAAAATGTGGTGGAGCCCGac
tttcgaaaaagaaaattctCCCAGTTGCCAGATCCTGAAGTGTcacggaa
aaaagtttttcagaattttctggagaatttattattagttttttctattt
tttgtacATAGATGCGTATTAATACTGCTATCAATGTGTCTTACTTACTT
GATAATTTCTTTATCGTCGAGATGCCCAAAGCTTAGCATCGTTTGGTTTC
CTAAGAAATCATCTTTAATCCCGGaaggaactccttaaaaattgCTGGAA
CAGCCAAAAACCGGCGTAAAGCGGGTTTCCTTCACTATTTCGAGAATATC
AGGTATATAAAGTGTCACTTGTTGCACTTTTGAACCTTaagaaatattta
tttgtaTTCCTTCCAGACCTAACAAAGACACATTGGAACTTGCCAGAGCC
TGTTTCCATCTTCTTTGGACGAGAAAGTTTGATTAAATCCATTCACTTGA
AACTTCAACAAAATCAAGCAGTTGCTTTGAGTGAAATGGGAGGTGTGGGG
AAAACACAAACCGCTGCAAAGTTCGTTCAAATACACAAGGATGAATATCA
GAAGATATTTTGGATTTCTGCTGTCAGCCTCAAGAGATCTCTGAACGAGA
TTTTGTGTGCATTTGGTTGTAAACAACTAATACCTGATGAACCTTCGATG
GAAACTCTTGCTTTCATTTTCCTCTCTAAGATTTGTGAAGGCTCCCAAGG
ATCGCTAGTTGTATTGGATGACGTCACTGAGGTCACAAAAGACGTCACTT
CATTCATTCGaaatgtgaaagaaaaaatcagcTTATTGTTGACATCTCAA
TTGAGGGATTGGGAAGATTATGATTTGATTCAAATTGCTGTTCCATGTTT
CCAAGAACAAGAATCCATGGGCTTCTTACAGAATGAACTTTCTTCAGCCA
GCCAACATGACATCTCCTTTTTAGCGAGTCGTTTACAATCATTACCTTTA
GCCCTTCACCAAGCCATTTGTTACATCAAGAAACATAAAGTTCCTCTACA
CAAATACATCGAACAATTCGAAGTTTGCAGAGAAATTGTTTTGGGAATGA
AAATCAATTCTTTTACTGAATATGACAAAACATTGTTGACAGTTTGGGAT
TTGGCTTTTGAGAAAATTCGGGTCGAATCAAAGAATGCTCTTTTGTTCTT
GGGAATGATGGCTTTCATGGACaatcgaaaaatcaataaaaagacaTTCA
GCTATTTTGATAAAGTTGACGAATTTGAATTAAATGANAAGAATGCTCTT
TTGATCTTGGGAATGATGGCTTTCATGGACaatcgaaaaatcaataaaaa
gacaTTCAGCTATTTTGATAAAGTTGACGAATTTGAATTAAGTGAAATCA
TCAATCTGCTTTGTCAATATTCATTGGTCAACGAGCGGAACGAATATTTA
GAAATTCACAGTCTTGTGCAAAAAGTTATCCGATATCGTATTGAACAAAA
ACAATTTGTTAAGGACGAATGTCCGTTGACACTTCTTGAAGGTGTTCTTT
TGAAAATCAAGTCTTCTGTTGCGGTTTTGGGATTAAATGCTGACTGTGAA
GATTTATGGTACATCCATGTTTTTCGTTTGATCATGAGTGGTGCACTCAA
AACTATCAACTTTGATGTTTCCCTTGTGTTAAATATCGCCATAGGCAGAA
TGGAGATGGAAAACTTTTACCAAATTTCTGAACttcttttaaaagttttg
tttaaaCAATATAGGTTGTTTCGAGATGTGGAAACTTTTCACACGTTGTT
GCTTGTTCATCATCGTTTCATAAACGCGTCAATTAATTTAGGTTTGCTTA
ATTTGAATGagatttttgcttttgaagAAGAGTTTTCCTCAGAGCTTGAA
GAACattttgaagaagtttaccAGTGGAAGCTACAGCAAGCTGAGGTATA
TAATGTACATGGACGAGTGTCGTTATTCAATGATATCGTTCGAAATTTAT
TTAATGAACTTGTCAAGAAGAAAGGATTTGataatattaaattaaaattg
gcGAGACATCTCACTGCAAGGGATGTTGAAGTTTTGTTGATTTCCGTTGA
CACAAATAATCTCAGTGACGAGGAATTTTTGATGTATTATGATGCAAAAT
GTTCTTTATACATCCAGAATGGTTGCTTTGATTTAGCTGAACAAACCATG
AACGATTGGAAAGAACATATACAAAGACAAACATTTTCTCGAATATGGCA
CTTTAACTTGACAAAAAGGAATTGCTTTTTACTTTACAAGAAAGGAAATT
ACAACGAAGCGCTTCTTGCATGCGATGTTCTTAAACCAGACATTGTTTTT
ACTGGTGCAAATGTTTTCATTTGGGAAGCAttgattttgatcaaattaGG
AAAGTTCAACGATGCAGAAGTGTTACTTGATGACCTTGACCAACACAATA
AGATTACCATTGAAATCAGTTCATACCTGAAATTTCGAAAGCATGACTTT
GAAGCAGTAGAAAATTTCCTAATCGATGGGGAAGATGAGCGTCagtcaaa
tcttttgttttcggTAAAGGAATATGCGAAACTGCATCGACAACTCAAAA
ATAATAAATCGAAAGAATTGGTTGAACAATGTCTGCAAATGAAGAAAAGT
ATAACTAAGTTCTTTGAAGAAGATTTAAATTCGATTCGTTTTTGAAATGC
AATTTTATCAAATTGTGATTAGAATCGCATGTTTGGGAATTACTCCAAct
tttggctaaaatttttaACTGACTGCAATGTAATTGTTGTATTGACTTGG
CCTGGAAAAGCAGAAATGgaagtgtttttattttaattatgaAAATATTC
TAAGGGGtgttttcagggggtacccgattccgccaTTCGGTCTAAATTTT
GTCCAATTTCTGTCACACCGTCAAGTTCAAGTCTGAAATTCCACCACCGA
AAATTTCCAATGAAATTGAttcttttctccaaaattccagaattttgact
ttttggtgTAAATTCCGAAATTTCGAACGATTATTTGCCAAATTCCATTT
TTTCGGACCAAAACAGCTCAATTTCTCGTCTCCGACAGTGGACCTAAATT
TTGCACATCCGTCTAAATTTCTAATCGTCTTGAATTTTAGTGTTAAACTT
GAGAATTAAATGTTATGAATAAAATTATGGGTAGGCGAAATTTTTGGATG
GCAACATTCCAAGGATATTTTGAACAAAGTCGGTTGTTTGGGAGCAATTT
TATCATTAATATATTTTAGAttgcaaataaaaattttgtatattttttaa
aacaagGTTTAAATTCAcgattttcttagtttttatcTGGTGGCCCAGCA
TCACCcggattttcttcttttaataagaataattttgtaagaacaatgAG
GTCCCCAATGAGGCGatcgaaaataagaacatttcaagaacagTTATATG
ccttataaatttcaaaattatgataaaaaatcAGAACGAAAACAATctcg
aggggggggggtacggTAGTCGAGGTACAGTATGTGATGTGGTATTTACC
GCCCTTCAGGATGCCTTTTTGGAACCTGGCAGTCCCTGTAATGGTAtgag
aaatcagaaaaaaatgttttgaaacttNcacccggggggggggggtacag
tAGTCGAGGTACAGTATGTGATGTGGTATTTACCGCCCTTAAGGATGCCT
TTTTGGAACCTGGCAGTCCCTGTaatggtttgaaaaatcagaaaaattaa
atCTCAGTCCCATTAAGGGTCGAAAAATTATACCcctaaaacatcaaaat
ttggtcaaattagtcccaataagggtcgtaaaatgcacaacattttctaa
ttttctctcttttaggAGGGTCCGAGAATCGAAAGCCTGGTGGCACCCCC
GTCATCCTGTAGACTTAGTACTCCAACCTCCGTCCCGGGGAAAGCATATC
GATTGATAATATTTTGTACCTGTTAAGGTACCTGAACATAGTGTTAAGAC
AAAGTGTTTTTGAAACTCNTTTACCGCCCTTCAGGATGCCTTTTTGGAAC
CTGGCAGTCCCTGTAATGGTAtgagaaatcagaaaaaaatgttttgaaac
tttaataatttttttattccgAATAATGTAGTATATACATTAGTAGTATT
TTATTCCACTGTCTATGATAACCATTTTACTAAACCTATTTTATTAAATG
TTTCCCAAaatgaccatagttttgaagcTTAAATGTCATAATTTTCCTTT
AGAATCTTTGAAGTTTATAGCCCCCTGAGTTAgccttttaaaatgttttt
tgaaccGAAAGACGATCTCTGTTTTTTCAGACTTACATTTGTtatgcttt
ttatatttttcagcaaaaataaaagattaaGAAAATAGAACTAAATAAAT
GAAGAGAATGAGATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTG
GGTTCGCATCAACCTTGCTTTGGAGTATTGCATCAAAGGAGCGCTCATTG
ATGTACTTCACAACGCGCACAATGACACTTCTTATACTGGACTTCCAACT
TGTCCAAAACAACTTCATCAAATATTCGTGCAATGCAAACAAAACAAGAA
ACACGAGTTGGACAAAGTGTTGAAGAAAGAATAATGGGAAATATTGTGTC
CACAAAATGGATCATCCAACCCAGAAGATTGGGATATCACCTTATTGATT
GCTGTATTGAGGTCAGTGGTTGGATTGCAACCTGCTGGAGGATGGAAAAT
CAAATCTCTTCAACCCAACGATCAATCTATTGGAGCTTTCTTGTTTTTGA
TCAGAAATTTAAGAAATGAATTAATGCATGGTTCAATCAATGCAGTACCA
GATTTACAAGCTTTCAAACAACTGAGAGCTCGAATGGAGAACATTTTACT
GGGATTGAAATATAAGGATATGCAAATGTTTTATGATTTGGAAAGTTGTC
CATTGGATAAACATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGAC
CAAGAAGTGGATTTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTAT
CAAAAATATCGAACAAACTAATCAATGGATCAAAACTTATTTGAAACAAT
TATCTTCGGCAAAAGCTGACAAAACTGACGTCGAAGGTGAGATACATTGG
TTTTCAATGTCATCGAAAGCACATTTACTTTCTTACCTCTTTTGAATTTA
TGACATCCTAAGAGATGAATCTTGTTAACTTTTTACCTGTTGACACTGAA
TCTGTTGTCATTGAATATCACTATTTGTTTTACTCTAGATTTAGCCAAGT
CAATGAATATGAAAGCTGACAAAGATAAAATGGatggtatgttttttttt
ttggttaatactttttcaaaaaagaataaaaagtgaTCAAATCCCAAGAA
GCTTTGCCTTGGATGGTTGTGTAAGAGAAATTAGGAGGCTTCATCACTCC
ACACCCTTCTGAAGTAGAACTGAtctttataaaaactttgacGTCAATCA
AAAAAGCTGACATGttgattttcattattttttatctagaatTGTCCACA
GTGATGGATTCGAAATTGACGTTAAAGGCTGACAAATGCCAATTTGATGG
TAAAGTTATACCAGAAAAGTTTGTTGTGTTTTgtcgaatgtttttttctc
cttttttgagGTGGTCCGCTAGcaacttttttcatcaaaatacaacTTTG
GCATAATTCAGATTTCAAATGTATCTAGtcgatgaaaaatgtttcaaatg
ttCCGAGATCTTTAATTTCCTCTGTAATCTACacgaattttggtttttat
tcttttaaaggAAGTTCCAGAATAAAAAGGCCTTTTCTGACGAGTATCAT
TTTTTTTAACAGAATTGAGCAACAAAGTTGACCAGCTATCAATTGAATCA
AAATCTGTAAAGGGTAAAACTTGagctatgattttttttttgctatccat
gccttattattatttttattcttttaatcGAATGTTGCTGAATAAAAAgg
ctttttctgataaatatcAATTATTTTAACAGAATTGAGCAACAAAGTTG
ACCAGCTATCAATGGAATCAAAATCTGTAANCTGACGAGTATCATTTTTT
TAACAGAATTGAGCAACAAAGTTGACCAGCTATCAATGGAATCGAAATCT
GTAAAGGGTAAAGCGTTAgttatgatttttattttctctacCCATGCTCA
AGCCTGAATTTATTCAAAGAAactttattggacctaccccggtggagtgg
aggtcctataaattaacctgtgttcgtccgttcgtctgttaccaactttt
ctcaggattgaatcataggaatctatTGAGTTTTGGttcaaaggtgcaaa
atggtggtggctaAAATGTGACAAAgcgcgattttcgaaaaaaaattttg
taggcaaatttgggccaaaaaacggctaaaaaacgggttttttggacttt
gtgaaaaatttgaacattaattttttctgatttttcgcatgaaagtaggg
taccatcataggtaaaagatggctctagcagattttcgcaaaaaaaattt
tttggctcaaaaaaacgcatgtttatctttaagaatcactattaataagc
atacatcaatgttcttagtcaaattactcaatttttttatgagatagatg
tttttttgctcacgaagtcttgaatatgaaagaatatttcaacagcacga
aatgggcttttccagaaaaaaaccgtgcaccccctgttgaggagtccATT
TCCATTCCAAGGTGGTATGGTTTGAAATTCCATAGCAGTAGACAAAATTC
CGTCATAAATaagtggaattccatgggggtaatgaatgaaaatctttaaa
aatttgctATTCCAGTGGGATATGACCCTAAAATTGCCTGAAATTCCAAG
GCGGTaattcacaaaaggttggagctcctcaacagggggtgtacggtttt
tttctggaaaagcccaattttggtttctaatcgtttttttttataagaaa
caaacgactaattttaatagattgccactgtttgtgttctgaatgattgt
ttaatggtcacattatgtagatatcaattataaatgtgttaaatgcataa
ccaggtaggtccgttTTTGTTATTTGTTATCCTTGTTTTGTATTCCTTCT
AGATACAACAAAGACACATTGGAATTTGCCAGAGCCTGTTTCCATCTTCT
TTGGACGAGAAAGTTTGATTGAATCTTTTCACTTGAAACTTCAGCAAAAT
CAAGCGGTTGCTTTGAGTGAAATGGGAGGTGTGGGGAAAACACAAACTGC
TGCATAGTTCGTTCAAATGCACAAAGATGAATATTGGAAGATATTTTGGA
TTTCTGCTGTCAGCCTCAAGAAATCTTTGAGCGAGATTTTGTGTGCATTT
GGTTGTAAACAACTAATTCTTGATGAACCTTCGATGGAAACtctgatttt
cattttcctctCTAAGATTTGTGAAGGTTCCAAAGGATCGCTGGTTGTAT
TGGATGACGTCACTGAGGTCACAAAAGACGTCACCTCATTCATTCGaaat
gtgaaagaaaaaatcagcTTATTGTTGACATCCCAATTGAAAGATTGGGA
AGATTATGGTTTGATTCAAATTGCTGTTCCATGTTTCCAAGAACAAGAAT
CCATTGGCTTCTTACAGAATGAACTTTCTTCAGCCAGCCAACATGAAATC
TCCATTTTAGCGAATCGTTTACAATCATTACCTTTAGCCCTTCACCAAGC
CATTTGTTACATCAAAAAACATAAAGTTCCTCTACACAAATACATCGAAC
AATTTGAAGCATGCAGAGTAAGCGTTTTGGGAATGAAAATCAATTCCTTT
ACTGAATATGACAAAACATTGTTGACAGTTTGGGATTTGGCTTTTGCGAA
GATTCGGGTCGAATCAAAGAATGCTCTTTTGATCTTGGGAATGATGGCTT
TCATGGACAAtcgaaaaatcaacaaaaagacTTTCAGTTATTTTGATAAA
GTTGACGAATTTGAATTAAATGAAATCATCAATCTGCTTTGTCAATACTC
ATTGGTCAACGAACGGAACGAATGTTTAGAGATTCACAGTCTTGTGCAAA
AAGTTATCCGATATCGTATTGAACAAAAACAATTTGTTGAGGGTGAATGT
CCGTTGACACTGCTTGAAGTTGTTCTTTTGAAAATCGAGTCTTCTCTTGA
AGATTTGGTTGCAAATGGTGACTACGAGGATTTATGGTACATTCATGTTT
TTCGTTTGATCATGAGTGGTGCACTAAAAACTATCAACTTTGATGTTAAC
CAGGTGTTAAATATCGCGACAGGCAGAATGGAGTTGGAAAACTTATACCT
ACTTGCTGAActtctttcaaaagatttgtTAGAACAATATAGGTTGTCTC
GAGATGTGGAAACTTTTCACGGTTTATTGCTTGTTTATCGTCGTTTCATG
GACGCGTCAATTCTAATAGGTTTATTTAATATGAATGAGATTATTGCTTT
TGAAAAAGAGTTTTCCTCAGAGCTTGAAGAACATTGTGAAGAAGTTTACC
AGTGGAAGCTACAGCAAGCTCAGGCATATAATATACATGGACAAATGTCG
TTATACGAAGATATCGTTCGAAATTTATTCAATGAACTGGTCATAAAGAA
AGGATTTGATAATATTAAATTAATATTGGCAAGGCATCTCAATGTAAGGG
ATGTTGAAGTTTTGTTGAACTCCGTTGACACAAATAATGTCAGTGACATG
AACTTTCTGGTGTATTATGATACAAAATGTTCTTTATACATCAAGAACGG
TTGCTTTGACTTGGCTGAACAAGTTATGAAGAATTGGAAAGAACATTTAC
ACAGAAAACAATTTTCTCGAATGTTGCACTTTAACTTCACAAAAAAGAAT
TGCTATTTACTTTACAAGAAAGGAAATTACAACGAAGCATTGCTAGCTTG
CGATGAACTTAAACGTGATTTTTTTACTGATGCAGATATTTTAGCATTCG
AAGCAttgattttgatcaaattaAGAAAGTTCAACGACGCAGAAATTTTA
CTTGATGCCTTTGACCAACACAACAAGATTATCATTGAAATCAGCTCATA
CCTGAAATTTCGAAAGCATGACTTTGAAGCAGTAGAAAATCTTCTCGCCG
AAAAGGAAGGTGAGCGCCAgtcaaaacttttgttttgggtAAAGGGATAT
GAGAAACTGCATGGACAATTcgaaaataataaatcaaatGAATTGGTTGA
ACGATGTTtgcaaatgaaaaaatttgtaaCTGATTTATTTCAAGTACATT
TGGATTCGATTCATCTTTGAAATGCAATTTCATCGAATTATGATTAGAAT
CGGATCTTTGGGAACTACTCCAATCTTTGTGCTTTGGCTAAACTGATAAG
TTTTTTTAAGTGACTGTAATGTAATTTTTGCATTGACTTGGTCTGTAAAA
TCAGAAGTagtgtatttctttttaattatgaaaatatttgaggGGGTGGT
TTCAGGGGGCACCTGATTCCGCCATTCGGTCATTTCGGGACGATTTTTCG
CCAAGGTCCATTTTTTCGGACCAAAACAGCTCAATTTCTCGTCTCCGAAA
GTGGACCTAAATTCTGCACATCCGTCTAGATTTCTAATCGTCTTGAATTT
TATTGTTAAATTAGAGGATTACATGTTAGTAGGGGGAAATTTGTAAAATC
GCTCGATTTTTTTAGTCAAAGCACTTGTTATACATTTTTGGAAagctaag
gggtaggggaatcaaaataacttgggtgccaattttctttcggacacttt
ggtgtgattttcggacaaatacgacggtctcaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNagcttgagaaaacggagacctgt
tgtatatttttggaaagctctcaaaaaattaagattagtgatatattgcg
agtataggcgatttcagtacctaactcgagatattgagcttccgaaagcg
caaaaactggacaaaacagctgttttggctgaaaaacagtgaaaaacact
gtttttaaggattaatatctcgaattatgtaaagaaatcacctatactcg
caatatatcactaatcttaattttctgagagctttccaaaaatatacaac
aggtctccgttttctcaagctaaaatttttattaatatttcactctatga
tttttgcctggaaccgtcgtatttgtccgaaaatcacaccaaagtgtccg
aaaaaaaattggcacccaagttattttgattcccctaccccttggctttc
caaaaatgtataacaagtgctttgactaaaaaattcgagcgacctcaaaa
aaaacgaacaaatttccccctactatgttatgaaataaaattataGGTAG
GCGAAATTTTTAGATTGCAACATTCTAAGGATATTTTGAAGAAAGTTGGT
TGTTTGGGAGCAATTTTATTATTGATTTCTTTTAGattagaaataaaaat
tttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042091XLOC_042091Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067366-exon-scaffold_469-1491911889:546567..546613TCONS_00067366-exon-scaffold_469-1491911889:546567..546613Clytia hemisphaericaexon
TCONS_00067366-exon-scaffold_469-1510915933:546567..546613TCONS_00067366-exon-scaffold_469-1510915933:546567..546613Clytia hemisphaericaexon
TCONS_00067366-exon-scaffold_469-1575043694:546567..546613TCONS_00067366-exon-scaffold_469-1575043694:546567..546613Clytia hemisphaericaexon
TCONS_00067366-exon-scaffold_469-1491911889:555223..555273TCONS_00067366-exon-scaffold_469-1491911889:555223..555273Clytia hemisphaericaexon
TCONS_00067366-exon-scaffold_469-1510915933:555223..555273TCONS_00067366-exon-scaffold_469-1510915933:555223..555273Clytia hemisphaericaexon
TCONS_00067366-exon-scaffold_469-1575043694:555223..555273TCONS_00067366-exon-scaffold_469-1575043694:555223..555273Clytia hemisphaericaexon
TCONS_00067366-exon-scaffold_469-1491911889:556269..559620TCONS_00067366-exon-scaffold_469-1491911889:556269..559620Clytia hemisphaericaexon
TCONS_00067366-exon-scaffold_469-1510915933:556269..559620TCONS_00067366-exon-scaffold_469-1510915933:556269..559620Clytia hemisphaericaexon
TCONS_00067366-exon-scaffold_469-1575043694:556269..559620TCONS_00067366-exon-scaffold_469-1575043694:556269..559620Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:546567..559620 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (7.58926 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.418347	0	0.548751	0.920071	1.454	1.42589	2.98052	1.78626	0	4.28733	0.239338	3.82725	2.98728	0.510144	1.60124	0.288191	1.91936	2.16866	0.379467	1.71196	3.15874e-06	6.03752e-09	0.541369	7.0364	7.58926	0.516319	0.000630369	4.78926e-08	0.543942
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067366 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50010001500200025003000Sequence
Match NameE-valueIdentityDescription
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