TCONS_00067355 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067355
Unique NameTCONS_00067355
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067355 ID=TCONS_00067355|Name=TCONS_00067355|organism=Clytia hemisphaerica|type=transcript|length=1135bp
TGCCATTCACTTGTTTGACCAGTTGACTTTATTTACGTTCCAAATCttga
agaaaatttcataattttaaagaaattttcatttcgaaAATTCGATGAGT
CAGGGTGCTACTACTTTTTAAACAGCATCGTAGCAATGAAGGTTGTGGTT
TTGAGTTTTGCTTTGATTGCAGTAACCTGTGGGTTTGATGTTTGTGATGA
TTCCACCAAAAGATGTGTTTTATGGAAGGACAAATGCAAATTGCCCATGT
ACAAATACTACATGGAGTTGAATTGCCGAAAAACTTGCGATTTGTGCCCA
AAATGTGAAGACAAAGTACCAGTTTGCGATGCCAGCAAATGTTTGGAAGA
TTTTGATTATAGCCGGCTTAATTGTGCAAAGACCTGCTTGTTCTGTTCTG
taccAACCACAATGCCGCCCCCACCACCCACGCCCACATGGAAAGTCAAA
CCTGCAGGTGAATGTGGTGTGAAGCGAGCAGGAAGTCGAGTCATCAACGG
AGTAGATGCGAAGAGAGGTGAATGGCCCTGGCAAGTGTTGATCCGTTTCC
TTGGTGACACGCACTGTGGTGGTTCCATCATTTCACCTTTCTGGGTAGTG
ACAGCTGCTCATTGCGTGGACAAAAGAGAAGCTCTCATAGATGAATTCCA
AGTCGTTGTTGGTGAGCACGATTTCGACAAGCCCGAAGGAACCGAAACTT
CCATCGGAGTCAGCAAGATCATCAAACATCCACGATACAGCACACCGACA
CGATTCGATAAAGATATCGCTCTTCTCAAGTTGACTCGGCCCATTCCCTT
CGATAATTTGGTCGGAACTGTCTGTTTACCGGAGAAAAATCGGCCGGTGC
CTGTTGGAACCAAATGTTTCATCAGTGGTTGGGGAAAGATCCATGCATGG
GACAACATGTATCANAGGACAATCGTTTCTGTACCTCTTCGTAAACTTTA
GTAATAGTCCTTGTTGTCTCCTCTCCGTCCGCCCTCTGTTCATCTCCTTC
TTCGTCTTCTTTGTCCGAACTGTCCGAACTTTTGTCCGAATcatcatctt
cttcatcttcttcttcttcttcagcgAAAATATGAGAAGGATCATGTTGT
GGTTCGAAAGGTTTTTTGGCGAAATCAGCTGGTCG
Run BLAST on NCBI

protein sequence of TCONS_00067355-protein

>TCONS_00067355-protein ID=TCONS_00067355-protein|Name=TCONS_00067355-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
MKVVVLSFALIAVTCGFDVCDDSTKRCVLWKDKCKLPMYKYYMELNCRKT
CDLCPKCEDKVPVCDASKCLEDFDYSRLNCAKTCLFCSVPTTMPPPPPTP
TWKVKPAGECGVKRAGSRVINGVDAKRGEWPWQVLIRFLGDTHCGGSIIS
PFWVVTAAHCVDKREALIDEFQVVVGEHDFDKPEGTETSIGVSKIIKHPR
YSTPTRFDKDIALLKLTRPIPFDNLVGTVCLPEKNRPVPVGTKCFISGWG
KIHAWDNMYXRTIVSVPLRKL
Run BLAST on NCBI

transcript from alignment at scaffold_469:514543..518854+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067355 ID=TCONS_00067355|Name=TCONS_00067355|organism=Clytia hemisphaerica|type=transcript|length=4312bp|location=Sequence derived from alignment at scaffold_469:514543..518854+ (Clytia hemisphaerica)
TGCCATTCACTTGTTTGACCAGTTGACTTTATTTACGTTCCAAATCttga
agaaaatttcataattttaaagaaattttcatttcgaaAATTCGATGAGT
CAGGGTGCTACTACTTTTTAAACAGCATCGTAGCAATGAAGGTTGTGGTT
TTGAGTTTTGCTTTGATTGCAGTAACCTGTGGGTTTGATGGTAAGTTTTA
CATACTGGACCATAAATCTCACGATGGGAAAAGAACTAAAGCCcttcaat
gttttgattaaGAAAGGCAAAGGGAAACTACTTCTGAAAACATTGTTGAG
TTGCCATGAATTCCCTTTACTATAAGTACACACAATGTTCAGGTTCAGCA
CAAGTGAAAGATGATTGCTTATTGGCTAAAATGGCTAAAAACAAGGGCTT
GTTGTTCACGCCCATATTTAGATGACAATGTAGGTCAGTAGCGTGGTTGG
TCGACTAAAATTCGGGCAAACAGAATATAAGAAAGAATATATCTTTTTAA
AATTACGTGATCGAAGCGAGCACAAAAATGTTAGGGTATTTTTTCTCTCT
TGTATTCCAGCACCCCTTAAAAATATCGGCCGCCGATGCCAGGCTACTGA
TGGTGACCAACTTTTCTTGCGTCATCAATTTCAGTTCATCATTCACCTCT
TCTATCCATAGTTTGTGATGATTCCACCAAAAGATGTGTTTTATGGAAGG
ACAAATGCAAATTGCCCATGTACAAATACTACATGGAGTTGAATTGCCGA
AAAACTTGCGATTTGTGCCCAAGTAAGCAAAGAACATCTGTTTTATTGCC
CTGGTTCGATTATTTACACCCTGCGAAAAGACTAAATCATTCGAATCCTT
GATCATTGATGCTATATCCCTTTTCAAACGACAAAGCTATATGACCTTAG
CCCATCTGAAATGAGCACTTTTAAACTCAGTCAAAAATGACGGCTAGTTG
GAAATCATTACACCCGGAAGGGGCTAGCTGACGGGAGGGGGTGCCACCCG
ACTTTCGACTCCTGGACCCTTACCGgaactaaaaaagagaaaataaaggg
AAATGTCTTGTGAATttttgggacaaatttgaccaattttgacccaAATT
CCaatctttccgggggtaaaaaccCTTTGtgggattgaaatttgattttc
tgatttttccgacccttagcgggactttgtaaatccaaaaaaggtaccct
taagagcagcacataccgtaccctccatttgcctaagtaccctccCGGTC
ATTACATGATGTTTAATATGAAGCTTTCTATTACTGTGCTCAACTCATTT
GGAAACGCACGGGTGCACGAGATTTGTAGATTTACGgattcgtgatattc
atgacgtaatgtttttacGGAAGCACCTGAGAAATACCGGATGGCTGCCA
CTAATTTCTAATTCATCAAACAATAAAGCTAGTGGCAAATGCCCGAATTA
TTTCGGGTGTTTCTGTATAAAacaattcaatgtttaaaacaTGAAATGAA
AGAAACCCTCAAATTAGATAAACGTTTTCAatttaaagtcattttgaaat
tctttctgTTTTACAGAATGTGAAGACAAAGTACCAGTTTGCGATGCCAG
CAAATGTTTGGAAGATTTTGATTATAGCCGGCTTAATTGTGCAAAGACCT
GCTTGTTCTGTTCTGGTAGGTAGAAAGCAACACAATTTAATATGTCCTGC
TATTGGAGGATGTGTCTTTTTGTTCCTGCAAGAAACCATACCATACAAAC
TTCTTCTTTTAAGCGGTCAAATCAACAATTTACACTAGCACTTGTAattg
tttcaaagttttcatttcTGCCCGGACTTTCTTTCCGAGCAATTAAAGAA
TCAGAACTTACTCGCTTTCTTCAGCACTGCCGTAGCATTGTGGGTTCGAA
CTCCCTGCCCTTGATGGATATAAAGGATTTTCGATAGCCTCTCTACTTGA
TTCCCAGTAATTAAAGATATGATATAGGGctagtggagaaatccagggaa
aggagtggcgccctcccttACCTTGATGTAGACAGATAAAGAAAAATGAG
CCTTCTGGACATCTCCGACTGCGGTTGCAAAATTACTTTAACGTTCATAC
ATTCGagtaattttatttgaaattgttcAAGTATACGTTCGAATAAAAAG
TTCAAGTAAGAACTCTACTTTAACATTAGTATTTAATATTAACATTTATT
CAGTGCTTTTCAGTAATCATTTCCTTTTTTGCTTCCttcattttctactt
tttcattttcagtaccAACCACAATGCCGCCCCCACCACCCACGCCCACA
TGGAAAGTCAAACCTGCAGGTAAAGTTCTCCACTCTCCTCTTTTAGCTAA
AAAGAGTTTGTgttaaggtcccgaatagtagggggTCCGAATAAAAGGGG
GGTGTCCgagattttctcaaaatctaataaaaggGGGTCAAAATTGAAAG
GAGGGGTCCAAAATTGTACTTCCAAAAACCGCAAAAAAGGTAATTACAAG
CTGAAAAAAACTATGTAAAGTAATTCAGCTTGTGATAGctgaaaaaaagg
aattttaataACCGAGTGAGGACGTTTATTCGGGGCCTTAGAGTACCTCC
TTAGATAGTTACACCGTAACGTAGAATTTTACTGATGAATATTTTAACAA
CTTTTCCATTGTTTAGGTGAATGTGGTGTGAAGCGAGCAGGAAGTCGAGT
CATCAACGGAGTAGATGCGAAGAGAGGTGAATGGCCCTGGCAAGTGTTGA
TCCGTTTCCTTGGTGACACGCACTGTGGTGGTTCCATCATTTCACCTTTC
TGGGTAGTGACAGCTGCTCATTGCGTGGACAAAAGAGAAGCTCTCATAGA
TGAATTCCAAGTCGTGTAagtgacgctctctaattcgacgttcatATATT
CGATAAGCTCCATCATTCGATAATATTTAAAGCCATCGCCAACCATAAAC
TGTTATAAACGATCCCTTTCTATTCGATACGCCTCCTTATTCGATAGAAA
ACGAGTTCCTCGTAAAAGTCAAATTAGAGAGCTTCAACTGTAGTTTCAAT
TGCTCGTTGAATTCTTACCCTATCAAGGTTTGTATTTCTCCTGGGGGGGG
GAGGGCagataatattttcaaagatgTTTTCTTAAAGACGACTAATCaag
attcaaaaaattaaagaaaatataaagtttttacTTGGATTCATTGATTT
TTGGTGTATCTTCCAGCAATGTGTAATCTTTCGGTCTTGCTAATGACTTA
TCTTAAGGATTAACTAGACCAAAGAATTTGGAGGAATATTTGAATCTCAT
AAAACTTATTGCAATCAATCCATGATTCCACTTATTGAGGTAAAATATCA
TTTTGACAAAAGTTAAAGTTTCTTGTAATATTTATTGTTGTTGCACCAAC
AACAGTGCACAATCCAACGTTTTTTAACCGTCATCACTTTCAGTGTTGGT
GAGCACGATTTCGACAAGCCCGAAGGAACCGAAACTTCCATCGGAGTCAG
CAAGATCATCAAACATCCACGATACAGCACACCGACACGATTCGATAAAG
ATATCGCTCTTCTCAAGTTGACTCGGCCCATTCCCTTCGATAATTTGGTC
GGAACTGTCTGTTTACCGGAGAAAAATCGGCCGGTGCCTGTTGGAACCAA
ATGTTTCATCAGTGGTATGTCTCGATAGTTTTGTTCAATAATTTGTCTCG
ATAGTTTTGTTATCCAAATAATTTGTCTTGATAGTTTTAAGCTCTTCTTT
TTGAAATTGGAAAGGTTTTCTaaatcaactttgaactttAGATACCTCGC
AAGACAGTCTCTTTTTCAAACGTACACATATTTCTATACTTTCCCAAATC
CTACAACTAGAAGAACCACCATTACAAACGCCTTACAATGCCAAACGATT
TGtagatacagttgacgctctctaattcaacattctactattcaatacac
tccattattcgataaaaatctAATTCcaccttgaaaatcgaataagagat
CGTCAAATATATTTGTCTTCTCCCCGCTATAAGATGTTGAACGTCATTCT
GTAGGTTGGGGAAAGATCCATGCATGGGACAACATGTATCANAGGACAAT
CGTTTCTGTACCTCTTCGTAAACTTTAGTAATAGTCCTTGTTGTCTCCTC
TCCGTCCGCCCTCTGTTCATCTCCTTCTTCGTCTTCTTTGTCCGAACTGT
CCGAACTTTTGTCCGAATcatcatcttcttcatcttcttcttcttcttca
gcgAAAATATGAGAAGGATCATGTTGTGGTTCGAAAGGTTTTTTGGCGAA
ATCAGCTGGTCG

Coding sequence (CDS) from alignment at scaffold_469:514543..518854+

>TCONS_00067355 ID=TCONS_00067355|Name=TCONS_00067355|organism=Clytia hemisphaerica|type=CDS|length=5712bp|location=Sequence derived from alignment at scaffold_469:514543..518854+ (Clytia hemisphaerica)
ATGAAGGTTGTGGTTTTGAGTTTTGCTTTGATTGCAGTAACCTGTGGGTT
TGATGTTTGTGATGATTCCACCAAAAGATGTGTTTTATGGAAGGACAAAT
GCAAATTGCCCATGTACAAATACTACATGGAGTTGAATTGCCGAAAAACT
TGCGATTTGTGCCCAAAATGTGAAGACAAAGTACCAGTTTGCGATGCCAG
CAAATGTTTGGAAGATTTTGATTATAGCCGGCTTAATTGTGCAAAGACCT
GCTTGTTCTGTTCTGtaccAACCACAATGCCGCCCCCACCACCCACGCCC
ACATGGAAAGTCAAACCTGCAGGTGAATGTGGTGTGAAGCGAGCAGGAAG
TCGAGTCATCAACGGAGTAGATGCGAAGAGAGGTGAATGGCCCTGGCAAG
TGTTGATCCGTTTCCTTGGTGACACGCACTGTGGTGGTTCCATCATTTCA
CCTTTCTGGGTAGTGACAGCTGCTCATTGCGTGGACAAAAGAGAAGCTCT
CATAGATGAATTCCAAGTCGTTGTTGGTGAGCACGATTTCGACAAGCCCG
AAGGAACCGAAACTTCCATCGGAGTCAGCAAGATCATCAAACATCCACGA
TACAGCACACCGACACGATTCGATAAAGATATCGCTCTTCTCAAGTTGAC
TCGGCCCATTCCCTTCGATAATTTGGTCGGAACTGTCTGTTTACCGGAGA
AAAATCGGCCGGTGCCTGTTGGAACCAAATGTTTCATCAGTGGTTGGGGA
AAGATCCATGCATGGGACAACATGTATCANAGGACAATCGTTTCTGTACC
TCTTCGTAAACTTTAGATGAAGGTTGTGGTTTTGAGTTTTGCTTTGATTG
CAGTAACCTGTGGGTTTGATGTTTGTGATGATTCCACCAAAAGATGTGTT
TTATGGAAGGACAAATGCAAATTGCCCATGTACAAATACTACATGGAGTT
GAATTGCCGAAAAACTTGCGATTTGTGCCCAAAATGTGAAGACAAAGTAC
CAGTTTGCGATGCCAGCAAATGTTTGGAAGATTTTGATTATAGCCGGCTT
AATTGTGCAAAGACCTGCTTGTTCTGTTCTGtaccAACCACAATGCCGCC
CCCACCACCCACGCCCACATGGAAAGTCAAACCTGCAGGTGAATGTGGTG
TGAAGCGAGCAGGAAGTCGAGTCATCAACGGAGTAGATGCGAAGAGAGGT
GAATGGCCCTGGCAAGTGTTGATCCGTTTCCTTGGTGACACGCACTGTGG
TGGTTCCATCATTTCACCTTTCTGGGTAGTGACAGCTGCTCATTGCGTGG
ACAAAAGAGAAGCTCTCATAGATGAATTCCAAGTCGTTGTTGGTGAGCAC
GATTTCGACAAGCCCGAAGGAACCGAAACTTCCATCGGAGTCAGCAAGAT
CATCAAACATCCACGATACAGCACACCGACACGATTCGATAAAGATATCG
CTCTTCTCAAGTTGACTCGGCCCATTCCCTTCGATAATTTGGTCGGAACT
GTCTGTTTACCGGAGAAAAATCGGCCGGTGCCTGTTGGAACCAAATGTTT
CATCAGTGGTTGGGGAAAGATCCATGCATGGGACAACATGTATCANAGGA
CAATCGTTTCTGTACCTCTTCGTAAACTTTAGATGAAGGTTGTGGTTTTG
AGTTTTGCTTTGATTGCAGTAACCTGTGGGTTTGATGTTTGTGATGATTC
CACCAAAAGATGTGTTTTATGGAAGGACAAATGCAAATTGCCCATGTACA
AATACTACATGGAGTTGAATTGCCGAAAAACTTGCGATTTGTGCCCAAAA
TGTGAAGACAAAGTACCAGTTTGCGATGCCAGCAAATGTTTGGAAGATTT
TGATTATAGCCGGCTTAATTGTGCAAAGACCTGCTTGTTCTGTTCTGtac
cAACCACAATGCCGCCCCCACCACCCACGCCCACATGGAAAGTCAAACCT
GCAGGTGAATGTGGTGTGAAGCGAGCAGGAAGTCGAGTCATCAACGGAGT
AGATGCGAAGAGAGGTGAATGGCCCTGGCAAGTGTTGATCCGTTTCCTTG
GTGACACGCACTGTGGTGGTTCCATCATTTCACCTTTCTGGGTAGTGACA
GCTGCTCATTGCGTGGACAAAAGAGAAGCTCTCATAGATGAATTCCAAGT
CGTTGTTGGTGAGCACGATTTCGACAAGCCCGAAGGAACCGAAACTTCCA
TCGGAGTCAGCAAGATCATCAAACATCCACGATACAGCACACCGACACGA
TTCGATAAAGATATCGCTCTTCTCAAGTTGACTCGGCCCATTCCCTTCGA
TAATTTGGTCGGAACTGTCTGTTTACCGGAGAAAAATCGGCCGGTGCCTG
TTGGAACCAAATGTTTCATCAGTGGTTGGGGAAAGATCCATGCATGGGAC
AACATGTATCANAGGACAATCGTTTCTGTACCTCTTCGTAAACTTTAGAT
GAAGGTTGTGGTTTTGAGTTTTGCTTTGATTGCAGTAACCTGTGGGTTTG
ATGTTTGTGATGATTCCACCAAAAGATGTGTTTTATGGAAGGACAAATGC
AAATTGCCCATGTACAAATACTACATGGAGTTGAATTGCCGAAAAACTTG
CGATTTGTGCCCAAAATGTGAAGACAAAGTACCAGTTTGCGATGCCAGCA
AATGTTTGGAAGATTTTGATTATAGCCGGCTTAATTGTGCAAAGACCTGC
TTGTTCTGTTCTGtaccAACCACAATGCCGCCCCCACCACCCACGCCCAC
ATGGAAAGTCAAACCTGCAGGTGAATGTGGTGTGAAGCGAGCAGGAAGTC
GAGTCATCAACGGAGTAGATGCGAAGAGAGGTGAATGGCCCTGGCAAGTG
TTGATCCGTTTCCTTGGTGACACGCACTGTGGTGGTTCCATCATTTCACC
TTTCTGGGTAGTGACAGCTGCTCATTGCGTGGACAAAAGAGAAGCTCTCA
TAGATGAATTCCAAGTCGTTGTTGGTGAGCACGATTTCGACAAGCCCGAA
GGAACCGAAACTTCCATCGGAGTCAGCAAGATCATCAAACATCCACGATA
CAGCACACCGACACGATTCGATAAAGATATCGCTCTTCTCAAGTTGACTC
GGCCCATTCCCTTCGATAATTTGGTCGGAACTGTCTGTTTACCGGAGAAA
AATCGGCCGGTGCCTGTTGGAACCAAATGTTTCATCAGTGGTTGGGGAAA
GATCCATGCATGGGACAACATGTATCANAGGACAATCGTTTCTGTACCTC
TTCGTAAACTTTAGATGAAGGTTGTGGTTTTGAGTTTTGCTTTGATTGCA
GTAACCTGTGGGTTTGATGTTTGTGATGATTCCACCAAAAGATGTGTTTT
ATGGAAGGACAAATGCAAATTGCCCATGTACAAATACTACATGGAGTTGA
ATTGCCGAAAAACTTGCGATTTGTGCCCAAAATGTGAAGACAAAGTACCA
GTTTGCGATGCCAGCAAATGTTTGGAAGATTTTGATTATAGCCGGCTTAA
TTGTGCAAAGACCTGCTTGTTCTGTTCTGtaccAACCACAATGCCGCCCC
CACCACCCACGCCCACATGGAAAGTCAAACCTGCAGGTGAATGTGGTGTG
AAGCGAGCAGGAAGTCGAGTCATCAACGGAGTAGATGCGAAGAGAGGTGA
ATGGCCCTGGCAAGTGTTGATCCGTTTCCTTGGTGACACGCACTGTGGTG
GTTCCATCATTTCACCTTTCTGGGTAGTGACAGCTGCTCATTGCGTGGAC
AAAAGAGAAGCTCTCATAGATGAATTCCAAGTCGTTGTTGGTGAGCACGA
TTTCGACAAGCCCGAAGGAACCGAAACTTCCATCGGAGTCAGCAAGATCA
TCAAACATCCACGATACAGCACACCGACACGATTCGATAAAGATATCGCT
CTTCTCAAGTTGACTCGGCCCATTCCCTTCGATAATTTGGTCGGAACTGT
CTGTTTACCGGAGAAAAATCGGCCGGTGCCTGTTGGAACCAAATGTTTCA
TCAGTGGTTGGGGAAAGATCCATGCATGGGACAACATGTATCANAGGACA
ATCGTTTCTGTACCTCTTCGTAAACTTTAGATGAAGGTTGTGGTTTTGAG
TTTTGCTTTGATTGCAGTAACCTGTGGGTTTGATGTTTGTGATGATTCCA
CCAAAAGATGTGTTTTATGGAAGGACAAATGCAAATTGCCCATGTACAAA
TACTACATGGAGTTGAATTGCCGAAAAACTTGCGATTTGTGCCCAAAATG
TGAAGACAAAGTACCAGTTTGCGATGCCAGCAAATGTTTGGAAGATTTTG
ATTATAGCCGGCTTAATTGTGCAAAGACCTGCTTGTTCTGTTCTGtaccA
ACCACAATGCCGCCCCCACCACCCACGCCCACATGGAAAGTCAAACCTGC
AGGTGAATGTGGTGTGAAGCGAGCAGGAAGTCGAGTCATCAACGGAGTAG
ATGCGAAGAGAGGTGAATGGCCCTGGCAAGTGTTGATCCGTTTCCTTGGT
GACACGCACTGTGGTGGTTCCATCATTTCACCTTTCTGGGTAGTGACAGC
TGCTCATTGCGTGGACAAAAGAGAAGCTCTCATAGATGAATTCCAAGTCG
TTGTTGGTGAGCACGATTTCGACAAGCCCGAAGGAACCGAAACTTCCATC
GGAGTCAGCAAGATCATCAAACATCCACGATACAGCACACCGACACGATT
CGATAAAGATATCGCTCTTCTCAAGTTGACTCGGCCCATTCCCTTCGATA
ATTTGGTCGGAACTGTCTGTTTACCGGAGAAAAATCGGCCGGTGCCTGTT
GGAACCAAATGTTTCATCAGTGGTTGGGGAAAGATCCATGCATGGGACAA
CATGTATCANAGGACAATCGTTTCTGTACCTCTTCGTAAACTTTAGATGA
AGGTTGTGGTTTTGAGTTTTGCTTTGATTGCAGTAACCTGTGGGTTTGAT
GTTTGTGATGATTCCACCAAAAGATGTGTTTTATGGAAGGACAAATGCAA
ATTGCCCATGTACAAATACTACATGGAGTTGAATTGCCGAAAAACTTGCG
ATTTGTGCCCAAAATGTGAAGACAAAGTACCAGTTTGCGATGCCAGCAAA
TGTTTGGAAGATTTTGATTATAGCCGGCTTAATTGTGCAAAGACCTGCTT
GTTCTGTTCTGtaccAACCACAATGCCGCCCCCACCACCCACGCCCACAT
GGAAAGTCAAACCTGCAGGTGAATGTGGTGTGAAGCGAGCAGGAAGTCGA
GTCATCAACGGAGTAGATGCGAAGAGAGGTGAATGGCCCTGGCAAGTGTT
GATCCGTTTCCTTGGTGACACGCACTGTGGTGGTTCCATCATTTCACCTT
TCTGGGTAGTGACAGCTGCTCATTGCGTGGACAAAAGAGAAGCTCTCATA
GATGAATTCCAAGTCGTTGTTGGTGAGCACGATTTCGACAAGCCCGAAGG
AACCGAAACTTCCATCGGAGTCAGCAAGATCATCAAACATCCACGATACA
GCACACCGACACGATTCGATAAAGATATCGCTCTTCTCAAGTTGACTCGG
CCCATTCCCTTCGATAATTTGGTCGGAACTGTCTGTTTACCGGAGAAAAA
TCGGCCGGTGCCTGTTGGAACCAAATGTTTCATCAGTGGTTGGGGAAAGA
TCCATGCATGGGACAACATGTATCANAGGACAATCGTTTCTGTACCTCTT
CGTAAACTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042089XLOC_042089Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067355-proteinTCONS_00067355-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067355-exon-scaffold_469-1491911889:514543..514732TCONS_00067355-exon-scaffold_469-1491911889:514543..514732Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1510915933:514543..514732TCONS_00067355-exon-scaffold_469-1510915933:514543..514732Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1575043694:514543..514732TCONS_00067355-exon-scaffold_469-1575043694:514543..514732Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1491911889:515204..515314TCONS_00067355-exon-scaffold_469-1491911889:515204..515314Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1510915933:515204..515314TCONS_00067355-exon-scaffold_469-1510915933:515204..515314Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1575043694:515204..515314TCONS_00067355-exon-scaffold_469-1575043694:515204..515314Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1491911889:516109..516207TCONS_00067355-exon-scaffold_469-1491911889:516109..516207Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1510915933:516109..516207TCONS_00067355-exon-scaffold_469-1510915933:516109..516207Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1575043694:516109..516207TCONS_00067355-exon-scaffold_469-1575043694:516109..516207Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1491911889:516805..516861TCONS_00067355-exon-scaffold_469-1491911889:516805..516861Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1510915933:516805..516861TCONS_00067355-exon-scaffold_469-1510915933:516805..516861Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1575043694:516805..516861TCONS_00067355-exon-scaffold_469-1575043694:516805..516861Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1491911889:517209..517407TCONS_00067355-exon-scaffold_469-1491911889:517209..517407Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1510915933:517209..517407TCONS_00067355-exon-scaffold_469-1510915933:517209..517407Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1575043694:517209..517407TCONS_00067355-exon-scaffold_469-1575043694:517209..517407Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1491911889:517986..518206TCONS_00067355-exon-scaffold_469-1491911889:517986..518206Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1510915933:517986..518206TCONS_00067355-exon-scaffold_469-1510915933:517986..518206Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1575043694:517986..518206TCONS_00067355-exon-scaffold_469-1575043694:517986..518206Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1491911889:518597..518854TCONS_00067355-exon-scaffold_469-1491911889:518597..518854Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1510915933:518597..518854TCONS_00067355-exon-scaffold_469-1510915933:518597..518854Clytia hemisphaericaexon
TCONS_00067355-exon-scaffold_469-1575043694:518597..518854TCONS_00067355-exon-scaffold_469-1575043694:518597..518854Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:514543..518854 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0405075	0	0	0	0.103839	0	0.592812	0.971195	2.47414	4.44173	8.62667	1.29462	86.2312	100.434	0.212382	0.599425	32.7055	37.9387	258.968	240.603	126.939	141.437	71.4164	80.3468	152.591	218.799	1.6333	1.31922	0.553672	0.274416
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR003582ShKT_dom
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
Blast
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BLAST of TCONS_00067355 vs. Swiss-Prot (Human)
Match: PRS33 (Serine protease 33 OS=Homo sapiens GN=PRSS33 PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.302e-28
Identity = 59/144 (40.97%), Postives = 80/144 (55.56%), Query Frame = 1 
Query:  463 CGVKRAGSRVINGVDAKRGEWPWQVLIRFLGDTHCGGSIISPFWVVTAAHCVDKREALIDEFQVVVGEHDFDKPEGTETSIGVSKIIKHPRYSTPTRFDKDIALLKLTRPIPFDNLVGTVCLPEKNRPVPVGTKCFISGWGKIH 894
            CG  R  SR++ G D + GEWPWQ  I+  G   CGGS+I+P WV+TAAHC  +R AL  E++V +G            S+ V +++  P YS       D+ALL+L RP+P    V  VCLP      P GT C ++GWG + 
Sbjct:   28 CGQPRMSSRIVGGRDGRDGEWPWQASIQHRGAHVCGGSLIAPQWVLTAAHCFPRR-ALPAEYRVRLGALRLGSTSPRTLSVPVRRVLLPPDYSE-DGARGDLALLQLRRPVPLSARVQPVCLPVPGARPPPGTPCRVTGWGSLR 169
The following BLAST results are available for this feature:
BLAST of TCONS_00067355 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRS331.302e-2840.97Serine protease 33 OS=Homo sapiens GN=PRSS33 PE=1 ... [more]
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