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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067351 ID=TCONS_00067351|Name=TCONS_00067351|organism=Clytia hemisphaerica|type=transcript|length=1367bp
AACCTATAGAGTCAATCGGAAAGAGTCTGGTAATGATCAAATCAGGTAAC
CTTTGAGCATCATTTCCCAAGATGTTTCCATAAAGTTGTCGATCAATCAC
TGTGTGTATTCTGATCGGCTCCCTGATCCCTCGCATCCAATTATCCTCAT
TGGAGCCATCCGTTAGCACTTCCAACATCCCTGGCACTTTCTTCTCGTCA
TCACACGAGAACACACGGAACATGGAATCCATGGTGATGAAACTGTTATA
ACCGTCCTCACCCTCGTATTCGTGTTTTGAAATGTAATTGTCTAAAATAT
AATCAAACCATGAAGCCAAATTGTTCTTTTTGGAATCAAACACCTTCCTC
TCAACTCTTTGACAAATTTGATCATTCTTTAATTTAACGGTGAATTTAAA
GACTGCTTCACTTTTCAGTTTATCCGGAACTCCCTCACATTTCATAAGTT
CTTTCAAATTATTAGCAGCAATATCCGTCTGAGTGAAAGCTTGAGTTGTA
GGTTTCAAGATAAATGAAGCAGGCATGACTCTCTTCTGTGGACTGCGTAC
TTCTTTTTTGACAGTAATAGTCTCTTCCACCTCGATGGGTTGTCGTGAGT
CCTGAGTCTCGTTATCATAAAGGTCCATCTCATCGCTATTGTGATTCTCC
GTTTTAACAATCACTTCACTCAGCTCTGACTTGATCTCTTTTTTCACACT
CAAATTCATTGAGCTATTCTGTTGAGTCTTTTTAGGGATTTTGGCTTGTT
TCTCCCTCAGTGTAGTCGGATTGGATATTGTTCTTTTGATCGGTGGTGCA
ACTTTTGATTTGGTAACAAAATTATCGAATACATCCTCTTCTTTAAACCT
ACTCACTTTGACTTCCTTTCTTTCGTAAGTTTGAAAAGTGTCCGAAATAT
TATCCTCGTCCGTGCTTTCGATTAAAATAGTgtcctttttcttcttttta
gcaTCAGAGGATTCTCGCTTCTTGGAGGAGGAGGTGTTCATTGGTATATG
TTTATTGCATTTGGGTGGGGCAGGTTTAGTGCTCGATTCTACAGAAGAAG
AAGACCTTTTCCGTTCTTTGGGCTTTTCTCGAGTATCTTTGGGTACGGAA
ATAATTGCGTCATTACTTTTAAGCCAATTCTCAACTTTTTTGTGTTTAtt
caatttcttgattttttgattaaatttatCTAACGTTGTGGTGGTAGGGA
TTGCAGGttcccttttcttcttcttgattCCGTATTGTTCTTCTATACCA
TAACTTTTCGCATTTTTGCCCTGACAAAAAGAATGAAGAATTACAATTAA
GTTTCCCCCATCTCTACtcagtatttttaattttcaacaaGTTCGCTGGT
AATTTTGGACAGGCACA Run BLAST on NCBI transcript from alignment at scaffold_469:445200..446667+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067351 ID=TCONS_00067351|Name=TCONS_00067351|organism=Clytia hemisphaerica|type=transcript|length=1468bp|location=Sequence derived from alignment at scaffold_469:445200..446667+ (Clytia hemisphaerica)
AACCTATAGAGTCAATCGGAAAGAGTCTGGTAATGATCAAATCAGGTAAC
CTTTGAGCATCATTTCCCAAGATGTTTCCATAAAGTTGTCGATCAATCAC
TGTGTGTATTCTGATCGGCTCCCTGATCCCTCGCATCCAATTATCCTCAT
TGGAGCCATCCGTTAGCACTTCCAACATCCCTGGCACTTTCTTCTCGTCA
TCACACGAGAACACACGGAACATGGAATCCATGGTGATGAAACTGTTATA
ACCGTCCTCACCCTCGTATTCGTGTTTTGAAATGTAATTGTCTAAAATAT
AATCAAACCATGAAGCCAAATTGTTCTTTTTGGAATCAAACACCTTCCTC
TCAACTCTTTGACAAATTTGATCATTCTTTAATTTAACGGTGAATTTAAA
GACTGCTTCACTTTTCAGTTTATCCGGAACTCCCTCACATTTCATAAGTT
CTTTCAAATTATTAGCAGCAATATCCGTCTGAGTGAAAGCTTGAGTTGTA
GGTTTCANTCACTTTTCAGTTTATCCGGAACTCCCTCACATTTCATAAGT
TCTTTCAAATTATTAGCAGCAATATCCGTCTGAGTGGAAGCTTGAGTTGT
AGGTTTCAAGATAAATGAAGCAGGCATGACTCTCTTCTGTGGACTGCGTA
CTTCTTTTTTGACAGTAATAGTCTCTTCCACCTCGATGGGTTGTCGTGAG
TCCTGAGTCTCGTTATCATAAAGGTCCATCTCATCGCTATTGTGATTCTC
CGTTTTAACAATCACTTCACTCAGCTCTGACTTGATCTCTTTTTTCACAC
TCAAATTCATTGAGCTATTCTGTTGAGTCTTTTTAGGGATTTTGGCTTGT
TTCTCCCTCAGTGTAGTCGGATTGGATATTGTTCTTTTGATCGGTGGTGC
AACTTTTGATTTGGTAACAAAATTATCGAATACATCCTCTTCTTTAAACC
TACTCACTTTGACTTCCTTTCTTTCGTAAGTTTGAAAAGTGTCCGAAATA
TTATCCTCGTCCGTGCTTTCGATTAAAATAGTgtcctttttcttcttttt
agcaTCAGAGGATTCTCGCTTCTTGGAGGAGGAGGTGTTCATTGGTATAT
GTTTATTGCATTTGGGTGGGGCAGGTTTAGTGCTCGATTCTACAGAAGAA
GAAGACCTTTTCCGTTCTTTGGGCTTTTCTCGAGTATCTTTGGGTACGGA
AATAATTGCGTCATTACTTTTAAGCCAATTCTCAACTTTTTTGTGTTTAt
tcaatttcttgattttttgattaaatttatCTAACGTTGTGGTGGTAGGG
ATTGCAGGttcccttttcttcttcttgattCCGTATTGTTCTTCTATACC
ATAACTTTTCGCATTTTTGCCCTGACAAAAAGAATGAAGAATTACAATTA
AGTTTCCCCCATCTCTACtcagtatttttaattttcaacaaGTTCGCTGG
TAATTTTGGACAGGCACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067351-exon-scaffold_469-1491911889:445200..445700 | TCONS_00067351-exon-scaffold_469-1491911889:445200..445700 | Clytia hemisphaerica | exon |
| TCONS_00067351-exon-scaffold_469-1510915933:445200..445700 | TCONS_00067351-exon-scaffold_469-1510915933:445200..445700 | Clytia hemisphaerica | exon |
| TCONS_00067351-exon-scaffold_469-1575043694:445200..445700 | TCONS_00067351-exon-scaffold_469-1575043694:445200..445700 | Clytia hemisphaerica | exon |
| TCONS_00067351-exon-scaffold_469-1491911889:445802..446667 | TCONS_00067351-exon-scaffold_469-1491911889:445802..446667 | Clytia hemisphaerica | exon |
| TCONS_00067351-exon-scaffold_469-1510915933:445802..446667 | TCONS_00067351-exon-scaffold_469-1510915933:445802..446667 | Clytia hemisphaerica | exon |
| TCONS_00067351-exon-scaffold_469-1575043694:445802..446667 | TCONS_00067351-exon-scaffold_469-1575043694:445802..446667 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:445200..446667 + |
Blast
The following BLAST results are available for this feature:
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