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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067320 ID=TCONS_00067320|Name=TCONS_00067320|organism=Clytia hemisphaerica|type=transcript|length=1291bp
TACCCTGCGGCTGTACCCCTCTCCCCACCTGTTTCAATCGTAACCATGAA
ATGTTTAGTCCATTTTGAGACGTAAAATTTTCTGCTTCAAATTTTTTCAG
ATCTTCTCGCTGGACGATGTATCGGCTGATCAAGCGTACTGTTTGACTTG
TGGAGAAAGATTCGTTCCTTACAGAGGTAAGAATGTATTTGAACAGCAAA
ATTGTCATAACAGCAAAGTTTTGTTTATGTATTCAAATTTTGCGAAATAT
TTACTCGATATAATTGAAACAAGGAATTGTTAGGTGGAAACTTCATCGGT
TTGTATTGAAGTACTCAGATAATTAGCATAAGAAGTGTCAGTTTGTGTCA
TGATATCGCGCAAACTGGAGTTGCTTGTCACGTGACCTACCTTGGGGCCA
TGTGCGTTGTGGAAGATATCATCTTCTGGTTTTTTATTCCCACGATCGTG
TGTATCGAAATTTCTATGTACTTGAACATCGTGTTTCATTTGTGAAAGAG
GGTCGTGTATAAGATTAGTACATTCCGCTCTGTTATTTTGAACTGCTGGG
CCTTCGATTTCATGTCGACCCATATTGCGTCCATCATCAAGCTGCTTTTG
ACCATCATCGAGCAAGGCTCCGTATCCTTTTACTTGTTGTGGTGGTGGTT
GAGGGTTTGGCTGGTCCTCAACGACATTCAAAAGTCGTTTTTTCGTTTCG
TCTTGCTCACCAAAACGAAAACAATAATTTGCAAATAAGTTTCCGATTTT
TACTAAAGTAAATTCGTAAATTTTCGTTCGAAAAAAGATTGCTGTTAATG
TGGTGTTTACGAGTGGTGTAATTGAAATGAAccccaataaaacttggtaa
tCTTCCAAACTCTTGTTAATGTAATTAAGATCAAGTTTAAGTTCATCTAA
ACCATCTGCATTAGAGTTATAAGTCACGATGTCTTGATAAATTATCACAC
TAATAGAATAAAACACGGTTGTTAGACAGGTGCACCAGACAACAGTCTCA
TCAAAACATTTTATTTGATGGTTTCTCCATCGCGTCTTTCTTAGAACTGT
CGTTATGATTAAAGTAAGCACAGTTGAATATGCAACAGTTGAAATCAAGA
ACAGATTAACGCTTCGGGTTCCGAATAACCCCAAAGGAACactacaagaa
aaaacaatcaacATAATAAGTATCTTGCAGCCACAAAATATGTATAACTG
GTTAACATTGTTCTGCTTTGCTGTTTTGTAGATGAAGTATAAACGACCAA
TAATGAATATTGCGAAAAGGAATGTTTGTGTCAAGGCAAAA Run BLAST on NCBI transcript from alignment at scaffold_469:38269..39559+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067320 ID=TCONS_00067320|Name=TCONS_00067320|organism=Clytia hemisphaerica|type=transcript|length=1291bp|location=Sequence derived from alignment at scaffold_469:38269..39559+ (Clytia hemisphaerica)
TACCCTGCGGCTGTACCCCTCTCCCCACCTGTTTCAATCGTAACCATGAA
ATGTTTAGTCCATTTTGAGACGTAAAATTTTCTGCTTCAAATTTTTTCAG
ATCTTCTCGCTGGACGATGTATCGGCTGATCAAGCGTACTGTTTGACTTG
TGGAGAAAGATTCGTTCCTTACAGAGGTAAGAATGTATTTGAACAGCAAA
ATTGTCATAACAGCAAAGTTTTGTTTATGTATTCAAATTTTGCGAAATAT
TTACTCGATATAATTGAAACAAGGAATTGTTAGGTGGAAACTTCATCGGT
TTGTATTGAAGTACTCAGATAATTAGCATAAGAAGTGTCAGTTTGTGTCA
TGATATCGCGCAAACTGGAGTTGCTTGTCACGTGACCTACCTTGGGGCCA
TGTGCGTTGTGGAAGATATCATCTTCTGGTTTTTTATTCCCACGATCGTG
TGTATCGAAATTTCTATGTACTTGAACATCGTGTTTCATTTGTGAAAGAG
GGTCGTGTATAAGATTAGTACATTCCGCTCTGTTATTTTGAACTGCTGGG
CCTTCGATTTCATGTCGACCCATATTGCGTCCATCATCAAGCTGCTTTTG
ACCATCATCGAGCAAGGCTCCGTATCCTTTTACTTGTTGTGGTGGTGGTT
GAGGGTTTGGCTGGTCCTCAACGACATTCAAAAGTCGTTTTTTCGTTTCG
TCTTGCTCACCAAAACGAAAACAATAATTTGCAAATAAGTTTCCGATTTT
TACTAAAGTAAATTCGTAAATTTTCGTTCGAAAAAAGATTGCTGTTAATG
TGGTGTTTACGAGTGGTGTAATTGAAATGAAccccaataaaacttggtaa
tCTTCCAAACTCTTGTTAATGTAATTAAGATCAAGTTTAAGTTCATCTAA
ACCATCTGCATTAGAGTTATAAGTCACGATGTCTTGATAAATTATCACAC
TAATAGAATAAAACACGGTTGTTAGACAGGTGCACCAGACAACAGTCTCA
TCAAAACATTTTATTTGATGGTTTCTCCATCGCGTCTTTCTTAGAACTGT
CGTTATGATTAAAGTAAGCACAGTTGAATATGCAACAGTTGAAATCAAGA
ACAGATTAACGCTTCGGGTTCCGAATAACCCCAAAGGAACactacaagaa
aaaacaatcaacATAATAAGTATCTTGCAGCCACAAAATATGTATAACTG
GTTAACATTGTTCTGCTTTGCTGTTTTGTAGATGAAGTATAAACGACCAA
TAATGAATATTGCGAAAAGGAATGTTTGTGTCAAGGCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067320-exon-scaffold_469-1491911889:38269..39559 | TCONS_00067320-exon-scaffold_469-1491911889:38269..39559 | Clytia hemisphaerica | exon |
| TCONS_00067320-exon-scaffold_469-1510915933:38269..39559 | TCONS_00067320-exon-scaffold_469-1510915933:38269..39559 | Clytia hemisphaerica | exon |
| TCONS_00067320-exon-scaffold_469-1575043694:38269..39559 | TCONS_00067320-exon-scaffold_469-1575043694:38269..39559 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:38269..39559 + |
Blast
The following BLAST results are available for this feature:
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