Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067306 ID=TCONS_00067306|Name=TCONS_00067306|organism=Clytia hemisphaerica|type=transcript|length=1856bp
TTGCAATTCAAGTCTTGGCAACGTCAATCTTTTCAGTGGAGCAACTCTTG
ACTTAGACAGTAGGATATGGCATGATACAGTTCCTTCACTCTCGATCCTG
ACATAAGCTAACGCAGCAAATGCCTTCTCGGAAGCGTCACAAAGGATATG
TAGTTCCACGTCTTGGTCACCTTCAAGGTTGAGACTTCTTGGGACAGCAA
CAGTGGATGCAATGTCAGACATTCGACAAAGCCAATCTTCATAACGATTT
TTGAGAGATTTGGAAACTTCCTCGTCCCATTCAAATTTGTCTCCCCATAG
TTCTTGCATGAAAAGTTTGGCGACAAGTGTGATTGGTGTCAAGGCCAAGT
GGATCGTAGATAGTCGCTGTCTTCTTGAGGATGGATCTCTTGGTACGTGG
CTTTGATCGATCAACTTCAACATTGACCTTGTAAACAAAACAATCTTTTT
CAAGGTCCCAGTGAACGCCTAGTGCTCTAGACATGACCTTGTCGTCCAGT
TTGATCCCAGTAGGTTGAGTAGCAAGCTTTTCTGTTGGTAAGTCCTTCAA
AACGGATTTGTCGTTACTTTGGAACTTTGTCAGGTTGAAGCCTTTGTTGT
TGAGAAGACTGATAACACCATGACTGGTCTCATTGGCTGATGTAGCATTT
GAATATGACATGAGTAAGTCATCGACATAGAAATTTCTCAAGACAGCTTT
GATGACTTCGGGTGGATAGTTGTTAGCTTGATCTCTTGCAGCTCGCTGTA
GGGCATAGGTCGCAGCACAGGGAGAATCCGTCAGCCCAAAAATGTGTACG
AGTAATTTATAGTGATCAGGAGGTTTGTGAGACTTTGGATCGTCTCTCCA
CAGGAATCTGTTTGCATCCATGTCAGCCTATTTTAATCTCACTTGACAAA
ACATAGCTTCGATATCAGCAACCACAGCAACTCTATGGCGTCTAAATCGA
AGCAAAACGCCAAGAAGGCTGTTCAGTAGATCAGGACCACTGTACAGGTT
GGAATTCAAGCTTTCTCCATGTGACTGAGCAGCAGCGTCGAACACCATAC
GTACTTTGCCTGGCTTATTCACACTGGTGACTCCATGATGAGGGATGTAC
CAAGTAGTGGCTGTGCGGCATAATGCTTCTTCGTCTGAGAGTTTTCTGAT
GTATCCTTTCTCAAGGTAGGATGATATGTTTTTAGCATACATTTCAAAGA
AGTTAGGATTGGATTGGAACTTCCTGCAAATTTGGTTGAGGCGTCTCTCA
GCCAAGATTTTGCTTTCAGGAAGGTTGACGTCCTTCTTCCAAAGCATTGG
TACGATATAGTGACCATCTTTGAATTCAGTTTCTTTGTCAAGAATTTCTT
GGTTACGTTGATCGTCAATAGAGCGTGATTTGGTTTCTTTGACCTCAGTA
CCAAATGATTCAGTCTCCCAAAAACTGCTGTATTCAGCCTCAGAAAATTC
ACTTCTGATCCCCAAATTTCTAGTCAGTGCAACAATTCGACTTTCAATCG
GATCTGAAGTACCATCGTACACTCCAAGTAGAGTCCAACCGAGTCGAGTC
TTTGAAGCATATGGGTAGCCTTTCTTTGACTTCCTGAAATCATGGCTGAT
GAGAACATCTGGAACATCAGCACCAATCAGTAGTTGTACTTGGCTGCTGT
CGATATCTTGAAGACCGAGATCTCTGATGTAATCCCAGCTAGAATCAGTT
GTTACCGGAACTTCTTGTCCTGGTACATTGAAATCCGAATCATTGAGGGA
gtacacatttttcactttagTCTGGTAACTGCCGTCAACAGCTGCGATGG
TAAGATCAATCAGCTTTGTCGGTAAAATGGTACTATCTCTGATTGTACCA
AAGTTG Run BLAST on NCBI protein sequence of TCONS_00067306-protein >TCONS_00067306-protein ID=TCONS_00067306-protein|Name=TCONS_00067306-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
NFGTIRDSTILPTKLIDLTIAAVDGSYQTKVKNVYSLNDSDFNVPGQEVP
VTTDSSWDYIRDLGLQDIDSSQVQLLIGADVPDVLISHDFRKSKKGYPYA
SKTRLGWTLLGVYDGTSDPIESRIVALTRNLGIRSEFSEAEYSSFWETES
FGTEVKETKSRSIDDQRNQEILDKETEFKDGHYIVPMLWKKDVNLPESKI
LAERRLNQICRKFQSNPNFFEMYAKNISSYLEKGYIRKLSDEEALCRTAT
TWYIPHHGVTSVNKPGKVRMVFDAAAQSHGESLNSNLYSGPDLLNSLLGV
LLRFRRHRVAVVADIEAMFCQVRLK Run BLAST on NCBI transcript from alignment at scaffold_468:94786..96641 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067306 ID=TCONS_00067306|Name=TCONS_00067306|organism=Clytia hemisphaerica|type=transcript|length=1856bp|location=Sequence derived from alignment at scaffold_468:94786..96641 (Clytia hemisphaerica)
CAACTTTGGTACAATCAGAGATAGTACCATTTTACCGACAAAGCTGATTG
ATCTTACCATCGCAGCTGTTGACGGCAGTTACCAGActaaagtgaaaaat
gtgtacTCCCTCAATGATTCGGATTTCAATGTACCAGGACAAGAAGTTCC
GGTAACAACTGATTCTAGCTGGGATTACATCAGAGATCTCGGTCTTCAAG
ATATCGACAGCAGCCAAGTACAACTACTGATTGGTGCTGATGTTCCAGAT
GTTCTCATCAGCCATGATTTCAGGAAGTCAAAGAAAGGCTACCCATATGC
TTCAAAGACTCGACTCGGTTGGACTCTACTTGGAGTGTACGATGGTACTT
CAGATCCGATTGAAAGTCGAATTGTTGCACTGACTAGAAATTTGGGGATC
AGAAGTGAATTTTCTGAGGCTGAATACAGCAGTTTTTGGGAGACTGAATC
ATTTGGTACTGAGGTCAAAGAAACCAAATCACGCTCTATTGACGATCAAC
GTAACCAAGAAATTCTTGACAAAGAAACTGAATTCAAAGATGGTCACTAT
ATCGTACCAATGCTTTGGAAGAAGGACGTCAACCTTCCTGAAAGCAAAAT
CTTGGCTGAGAGACGCCTCAACCAAATTTGCAGGAAGTTCCAATCCAATC
CTAACTTCTTTGAAATGTATGCTAAAAACATATCATCCTACCTTGAGAAA
GGATACATCAGAAAACTCTCAGACGAAGAAGCATTATGCCGCACAGCCAC
TACTTGGTACATCCCTCATCATGGAGTCACCAGTGTGAATAAGCCAGGCA
AAGTACGTATGGTGTTCGACGCTGCTGCTCAGTCACATGGAGAAAGCTTG
AATTCCAACCTGTACAGTGGTCCTGATCTACTGAACAGCCTTCTTGGCGT
TTTGCTTCGATTTAGACGCCATAGAGTTGCTGTGGTTGCTGATATCGAAG
CTATGTTTTGTCAAGTGAGATTAAAATAGGCTGACATGGATGCAAACAGA
TTCCTGTGGAGAGACGATCCAAAGTCTCACAAACCTCCTGATCACTATAA
ATTACTCGTACACATTTTTGGGCTGACGGATTCTCCCTGTGCTGCGACCT
ATGCCCTACAGCGAGCTGCAAGAGATCAAGCTAACAACTATCCACCCGAA
GTCATCAAAGCTGTCTTGAGAAATTTCTATGTCGATGACTTACTCATGTC
ATATTCAAATGCTACATCAGCCAATGAGACCAGTCATGGTGTTATCAGTC
TTCTCAACAACAAAGGCTTCAACCTGACAAAGTTCCAAAGTAACGACAAA
TCCGTTTTGAAGGACTTACCAACAGAAAAGCTTGCTACTCAACCTACTGG
GATCAAACTGGACGACAAGGTCATGTCTAGAGCACTAGGCGTTCACTGGG
ACCTTGAAAAAGATTGTTTTGTTTACAAGGTCAATGTTGAAGTTGATCGA
TCAAAGCCACGTACCAAGAGATCCATCCTCAAGAAGACAGCGACTATCTA
CGATCCACTTGGCCTTGACACCAATCACACTTGTCGCCAAACTTTTCATG
CAAGAACTATGGGGAGACAAATTTGAATGGGACGAGGAAGTTTCCAAATC
TCTCAAAAATCGTTATGAAGATTGGCTTTGTCGAATGTCTGACATTGCAT
CCACTGTTGCTGTCCCAAGAAGTCTCAACCTTGAAGGTGACCAAGACGTG
GAACTACATATCCTTTGTGACGCTTCCGAGAAGGCATTTGCTGCGTTAGC
TTATGTCAGGATCGAGAGTGAAGGAACTGTATCATGCCATATCCTACTGT
CTAAGTCAAGAGTTGCTCCACTGAAAAGATTGACGTTGCCAAGACTTGAA
TTGCAA Coding sequence (CDS) from alignment at scaffold_468:94786..96641 >TCONS_00067306 ID=TCONS_00067306|Name=TCONS_00067306|organism=Clytia hemisphaerica|type=CDS|length=978bp|location=Sequence derived from alignment at scaffold_468:94786..96641 (Clytia hemisphaerica)
AACTTTGGTACAATCAGAGATAGTACCATTTTACCGACAAAGCTGATTGA
TCTTACCATCGCAGCTGTTGACGGCAGTTACCAGActaaagtgaaaaatg
tgtacTCCCTCAATGATTCGGATTTCAATGTACCAGGACAAGAAGTTCCG
GTAACAACTGATTCTAGCTGGGATTACATCAGAGATCTCGGTCTTCAAGA
TATCGACAGCAGCCAAGTACAACTACTGATTGGTGCTGATGTTCCAGATG
TTCTCATCAGCCATGATTTCAGGAAGTCAAAGAAAGGCTACCCATATGCT
TCAAAGACTCGACTCGGTTGGACTCTACTTGGAGTGTACGATGGTACTTC
AGATCCGATTGAAAGTCGAATTGTTGCACTGACTAGAAATTTGGGGATCA
GAAGTGAATTTTCTGAGGCTGAATACAGCAGTTTTTGGGAGACTGAATCA
TTTGGTACTGAGGTCAAAGAAACCAAATCACGCTCTATTGACGATCAACG
TAACCAAGAAATTCTTGACAAAGAAACTGAATTCAAAGATGGTCACTATA
TCGTACCAATGCTTTGGAAGAAGGACGTCAACCTTCCTGAAAGCAAAATC
TTGGCTGAGAGACGCCTCAACCAAATTTGCAGGAAGTTCCAATCCAATCC
TAACTTCTTTGAAATGTATGCTAAAAACATATCATCCTACCTTGAGAAAG
GATACATCAGAAAACTCTCAGACGAAGAAGCATTATGCCGCACAGCCACT
ACTTGGTACATCCCTCATCATGGAGTCACCAGTGTGAATAAGCCAGGCAA
AGTACGTATGGTGTTCGACGCTGCTGCTCAGTCACATGGAGAAAGCTTGA
ATTCCAACCTGTACAGTGGTCCTGATCTACTGAACAGCCTTCTTGGCGTT
TTGCTTCGATTTAGACGCCATAGAGTTGCTGTGGTTGCTGATATCGAAGC
TATGTTTTGTCAAGTGAGATTAAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067306-exon-scaffold_468-1491911889:94786..96641 | TCONS_00067306-exon-scaffold_468-1491911889:94786..96641 | Clytia hemisphaerica | exon |
| TCONS_00067306-exon-scaffold_468-1510915933:94786..96641 | TCONS_00067306-exon-scaffold_468-1510915933:94786..96641 | Clytia hemisphaerica | exon |
| TCONS_00067306-exon-scaffold_468-1575043694:94786..96641 | TCONS_00067306-exon-scaffold_468-1575043694:94786..96641 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_468 | supercontig | scaffold_468:94786..96641 . |
Blast
The following BLAST results are available for this feature:
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