TCONS_00067300 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067300
Unique NameTCONS_00067300
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length250

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067300 ID=TCONS_00067300|Name=TCONS_00067300|organism=Clytia hemisphaerica|type=transcript|length=250bp
aagaaaagttctgtGTGGTTCTACTACCACGAAAACACGTATGTATTGCT
CTAATGAGCATAAAGTTCAGTTTGCGAAAAAACCAAGAAACAGTCTCTGA
ATATCGTGATCGTTCTTTGTTTGAAATCATATCTGAGAGTCTCTTAataa
atttttgacattctCGACCAGTTCCACCGGTTGCTGCAAATACGAGGGGA
GTGAATGAGCCGTGCTCAATTTGAAGAACTCGTTCGTTGTACTCTCGTTT
Run BLAST on NCBI

transcript from alignment at scaffold_468:47143..47392

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067300 ID=TCONS_00067300|Name=TCONS_00067300|organism=Clytia hemisphaerica|type=transcript|length=250bp|location=Sequence derived from alignment at scaffold_468:47143..47392 (Clytia hemisphaerica)
AAACGAGAGTACAACGAACGAGTTCTTCAAATTGAGCACGGCTCATTCAC
TCCCCTCGTATTTGCAGCAACCGGTGGAACTGGTCGagaatgtcaaaaat
ttatTAAGAGACTCTCAGATATGATTTCAAACAAAGAACGATCACGATAT
TCAGAGACTGTTTCTTGGTTTTTTCGCAAACTGAACTTTATGCTCATTAG
AGCAATACATACGTGTTTTCGTGGTAGTAGAACCACacagaacttttctt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042055XLOC_042055Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067300-exon-scaffold_468-1491911889:47143..47392TCONS_00067300-exon-scaffold_468-1491911889:47143..47392Clytia hemisphaericaexon
TCONS_00067300-exon-scaffold_468-1510915933:47143..47392TCONS_00067300-exon-scaffold_468-1510915933:47143..47392Clytia hemisphaericaexon
TCONS_00067300-exon-scaffold_468-1575043694:47143..47392TCONS_00067300-exon-scaffold_468-1575043694:47143..47392Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_468supercontigscaffold_468:47143..47392 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	2.15236	3.00923	0	0	0	0	0.314988	0	1.15085	2.88776	0	0	0.675853	1.30593	0.467153	0	0.868869	4.07464	4.85801	2.5246	7.20446	1.28021	0.2723	0	0	3.61496	0	1.11382	2.60074
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067300 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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