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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067297 ID=TCONS_00067297|Name=TCONS_00067297|organism=Clytia hemisphaerica|type=transcript|length=1014bp
ACTACACACGATGTAAGACTGATTGGGCGATATGATGCTAATTCGCTCGC
AATCTTTCCAGACTTCAGTAGCGGGATTATGATTGCATTTCTCCATATCT
GTGGGCAGTGTGCGGACACCATTGAGTTGTTGAAGATTCCCAGTAGTTCG
TCAAGACCTTTGTCTCCCAATTCTTTTAGAAAAGTTGGTGGTATTTCATC
AGGGCCTTGTGCCCCTTTTCTCTTCATTTCTTTTATCGCCTTTTTCAACT
CGTCTTTGGTAAAGTCTTGACAATATTCGTTGTTTACCGTGGTTGAGTGA
ATTCTCCTCTTGGCCTCTCGATTTATGTTCCTTTCCTCCTTGGTAAACTT
GTGTCTACTGACGTTTGCGTAGTGTTTTGCGAATATATTTGCCTTACGTT
TGTTTGATGTGATGAGTTTTCCTTTGTGTCTCATCGCCTCATTTGGAGAA
TTTGTCTCAGGGCACCCGTTTAGGCTTTTTATTATCTTCCACATCCTGGT
GTCGTCGATTTCCATCGCTGAAGATTCAAGTAGGTCCTTCCAGCTTTGTT
CCTTAGCTTTGGTGATTTCTTCTTGTGCTTGTTTGCATGATTCAAGCCAC
TCTTTGCGGTGCGTGGAGACTTTCTTTCTCAGGTTGTTCCGTCTTTTTAG
GGCAGCTTTAACGGTGGGGGTCATGAAGGAGCTGATCTTCCTTCCAGGTT
TGGATTTTCCCACGTGTTTTTTTGCAGCCTGTGTCAGGATTTGGTTGAAT
CTTGCAACTCTTCTGGTGAGGTTATTTTCTTCTAAGAGATTTTGACAATG
GTCTTCTACTTCGTTTCTGAAGTTGTTCCAGTTGACACCGTTTCGTCTCC
ATCTTCCTGGTTTACCGAAGACAGATTGGTGTGTCACCTTTGCGTTGATT
GTGACTTTGATTGGTAAATGATCAGAGCTACCCATTTGGGTACCGGTTTG
CCATTCACATTTGTTCCTCCAAAGCTCACCGACCAGGGATACGTCTGGTG
TACTCTCATTGCCT Run BLAST on NCBI protein sequence of TCONS_00067297-protein >TCONS_00067297-protein ID=TCONS_00067297-protein|Name=TCONS_00067297-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
GNESTPDVSLVGELWRNKCEWQTGTQMGSSDHLPIKVTINAKVTHQSVFG
KPGRWRRNGVNWNNFRNEVEDHCQNLLEENNLTRRVARFNQILTQAAKKH
VGKSKPGRKISSFMTPTVKAALKRRNNLRKKVSTHRKEWLESCKQAQEEI
TKAKEQSWKDLLESSAMEIDDTRMWKIIKSLNGCPETNSPNEAMRHKGKL
ITSNKRKANIFAKHYANVSRHKFTKEERNINREAKRRIHSTTVNNEYCQD
FTKDELKKAIKEMKRKGAQGPDEIPPTFLKELGDKGLDELLGIFNNSMVS
AHCPQIWRNAIIIPLLKSGKIASELASYRPISLTSCV Run BLAST on NCBI transcript from alignment at scaffold_468:36610..37623 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067297 ID=TCONS_00067297|Name=TCONS_00067297|organism=Clytia hemisphaerica|type=transcript|length=1014bp|location=Sequence derived from alignment at scaffold_468:36610..37623 (Clytia hemisphaerica)
AGGCAATGAGAGTACACCAGACGTATCCCTGGTCGGTGAGCTTTGGAGGA
ACAAATGTGAATGGCAAACCGGTACCCAAATGGGTAGCTCTGATCATTTA
CCAATCAAAGTCACAATCAACGCAAAGGTGACACACCAATCTGTCTTCGG
TAAACCAGGAAGATGGAGACGAAACGGTGTCAACTGGAACAACTTCAGAA
ACGAAGTAGAAGACCATTGTCAAAATCTCTTAGAAGAAAATAACCTCACC
AGAAGAGTTGCAAGATTCAACCAAATCCTGACACAGGCTGCAAAAAAACA
CGTGGGAAAATCCAAACCTGGAAGGAAGATCAGCTCCTTCATGACCCCCA
CCGTTAAAGCTGCCCTAAAAAGACGGAACAACCTGAGAAAGAAAGTCTCC
ACGCACCGCAAAGAGTGGCTTGAATCATGCAAACAAGCACAAGAAGAAAT
CACCAAAGCTAAGGAACAAAGCTGGAAGGACCTACTTGAATCTTCAGCGA
TGGAAATCGACGACACCAGGATGTGGAAGATAATAAAAAGCCTAAACGGG
TGCCCTGAGACAAATTCTCCAAATGAGGCGATGAGACACAAAGGAAAACT
CATCACATCAAACAAACGTAAGGCAAATATATTCGCAAAACACTACGCAA
ACGTCAGTAGACACAAGTTTACCAAGGAGGAAAGGAACATAAATCGAGAG
GCCAAGAGGAGAATTCACTCAACCACGGTAAACAACGAATATTGTCAAGA
CTTTACCAAAGACGAGTTGAAAAAGGCGATAAAAGAAATGAAGAGAAAAG
GGGCACAAGGCCCTGATGAAATACCACCAACTTTTCTAAAAGAATTGGGA
GACAAAGGTCTTGACGAACTACTGGGAATCTTCAACAACTCAATGGTGTC
CGCACACTGCCCACAGATATGGAGAAATGCAATCATAATCCCGCTACTGA
AGTCTGGAAAGATTGCGAGCGAATTAGCATCATATCGCCCAATCAGTCTT
ACATCGTGTGTAGT Coding sequence (CDS) from alignment at scaffold_468:36610..37623 >TCONS_00067297 ID=TCONS_00067297|Name=TCONS_00067297|organism=Clytia hemisphaerica|type=CDS|length=1011bp|location=Sequence derived from alignment at scaffold_468:36610..37623 (Clytia hemisphaerica)
GGCAATGAGAGTACACCAGACGTATCCCTGGTCGGTGAGCTTTGGAGGAA
CAAATGTGAATGGCAAACCGGTACCCAAATGGGTAGCTCTGATCATTTAC
CAATCAAAGTCACAATCAACGCAAAGGTGACACACCAATCTGTCTTCGGT
AAACCAGGAAGATGGAGACGAAACGGTGTCAACTGGAACAACTTCAGAAA
CGAAGTAGAAGACCATTGTCAAAATCTCTTAGAAGAAAATAACCTCACCA
GAAGAGTTGCAAGATTCAACCAAATCCTGACACAGGCTGCAAAAAAACAC
GTGGGAAAATCCAAACCTGGAAGGAAGATCAGCTCCTTCATGACCCCCAC
CGTTAAAGCTGCCCTAAAAAGACGGAACAACCTGAGAAAGAAAGTCTCCA
CGCACCGCAAAGAGTGGCTTGAATCATGCAAACAAGCACAAGAAGAAATC
ACCAAAGCTAAGGAACAAAGCTGGAAGGACCTACTTGAATCTTCAGCGAT
GGAAATCGACGACACCAGGATGTGGAAGATAATAAAAAGCCTAAACGGGT
GCCCTGAGACAAATTCTCCAAATGAGGCGATGAGACACAAAGGAAAACTC
ATCACATCAAACAAACGTAAGGCAAATATATTCGCAAAACACTACGCAAA
CGTCAGTAGACACAAGTTTACCAAGGAGGAAAGGAACATAAATCGAGAGG
CCAAGAGGAGAATTCACTCAACCACGGTAAACAACGAATATTGTCAAGAC
TTTACCAAAGACGAGTTGAAAAAGGCGATAAAAGAAATGAAGAGAAAAGG
GGCACAAGGCCCTGATGAAATACCACCAACTTTTCTAAAAGAATTGGGAG
ACAAAGGTCTTGACGAACTACTGGGAATCTTCAACAACTCAATGGTGTCC
GCACACTGCCCACAGATATGGAGAAATGCAATCATAATCCCGCTACTGAA
GTCTGGAAAGATTGCGAGCGAATTAGCATCATATCGCCCAATCAGTCTTA
CATCGTGTGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067297-exon-scaffold_468-1491911889:36610..37623 | TCONS_00067297-exon-scaffold_468-1491911889:36610..37623 | Clytia hemisphaerica | exon |
| TCONS_00067297-exon-scaffold_468-1510915933:36610..37623 | TCONS_00067297-exon-scaffold_468-1510915933:36610..37623 | Clytia hemisphaerica | exon |
| TCONS_00067297-exon-scaffold_468-1575043694:36610..37623 | TCONS_00067297-exon-scaffold_468-1575043694:36610..37623 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_468 | supercontig | scaffold_468:36610..37623 . |
Blast
The following BLAST results are available for this feature:
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