Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067277 ID=TCONS_00067277|Name=TCONS_00067277|organism=Clytia hemisphaerica|type=transcript|length=759bp
AGCGACATGTATACTAGCAGTCATGAACGCcgtaaattccctgctaatGT
GTCGGAATCAAACGTTGAATCAATGTGCTGTGTTGAACAGCATCATTCTC
AAGAGAGGAAAAGCTGATAAGCAATGTTTTGCTAGATTTAATGCTCTTCA
AACATGCGTTTCTTATCAAAATACACTGGGAAAGCAGACTGAATTGGGTA
AAGTATTAAAGACCATCGCAGTACAATCAAAGAGTGGAGCAGGCAGATCG
CTGAATACCAGCAGGCCAAGAAAAATTCTATCCACACTGAAATCCTTGAT
CAGAGTAAAGAGTTTCAGTTAACCAAATGCAACAACCCTGTCAATTTAGC
CAAGATCGAAAGTAGTTTTCTGGACAAAGCAGCAGCGTCAAAACCTAAAT
TTCGTATACTGGACAGCATAACAGAGGAAGAAAGTCTAGATGTTGACCAA
TTTGAGACCGATGAGTCCANCAAAACCTAAGTTTCGTATAATGGACAGCA
TCACAGAGGAAGAAAGTCTAAATGTTGACCAATTTGAGACCGAGGAGTCC
GACAAGGCAATAGCAGATTTAAGTTTCGATAGTGCACCAATTCGACCAAT
AGAAGTTTCAACTCCAAATAAATCAATCGATGTCGAGTTCCAAATCCAGC
TACCGAACGATCGAACTGCTGCTGAACCACAAACTGCGATCAATACAAAA
CTATCAACACCATCCAAACATCCACTATCGAACGATCGAACTGCTGCTGA
ACCACAAAC Run BLAST on NCBI transcript from alignment at scaffold_468:21600..22765- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067277 ID=TCONS_00067277|Name=TCONS_00067277|organism=Clytia hemisphaerica|type=transcript|length=1166bp|location=Sequence derived from alignment at scaffold_468:21600..22765- (Clytia hemisphaerica)
AGCGACATGTATACTAGCAGTCATGAACGCCGTAAATTCCCTGCTAATGT
GTCGGAATCAAACGTTGAATCAATGTGCTGTGTTGAACAGCATCATTCTC
AAGAGAGGAAAAGCTGATAAGCAATGTTTTGCTAGATTTAATGCTCTTCA
AACATGCGTTTCTTATCAAAATACACTGGGAAAGCAGACTGAATTGGGTA
AAGTATTAAAGACCATCGCAGTACAATCAAAGAGTGGAGCAGGCAGATCG
CTGAATACCAGCAGGCCAAGAAAAATTCTATCCACACTGAAATCCTTGAT
CAGAGTAAAGAGTTTCAGTTAACCAAATGCAACAACCCTGTCAATTTAGC
CAAGATCGAAAGTAGTTTTCTGGACAAAGCAGCAGCGTCAAAACCTAAAT
TTCGTATACTGGACAGCATAACAGAGGAAGAAAGTCTAGATGTTGACCAA
TTTGAGACCGATGAGTCCANCAAAACCTAAGTTTCGTATAATGGACAGCA
TCACAGAGGAAGAAAGTCTAAATGTTGACCAATTTGAGACCGAGGAGTCC
GACAAGGCAATAGCAGATTTAAGTTTCGATAGTGCACCAATTCGACCAAT
AGAAGTTTCAACTCCAAATAAATCAATCGATGTCGAGTTCCAAGTTAGTA
GATCCAGTTTCGTTTATACATACATGTTTTAAAATATAAAGCCTTTAATT
TTTTTTGGTTTTCCAAAATTTTCTTTTGTTTTTCTTTTAAAATTTCTAAA
ATTCTTAAAATCCCAATGATCGATAGGAATGATCAAAATGTTGTGTTGAG
TGTTGTTTTGTGTTCTTTCTAGAGGGGATGAAGGTTGATAATTTGGGATG
AAATTAGAGAGTATTTTGTGCTGTCAACTATATTCACTTGTGAAACAATC
TCGGTCAGTTTAACGAAACAGGGGTGTCAAATCTGATTTTAATTTCGGCC
ATTGACTTTTTTCCAAATTTTATCATCGAAGGGTCATAACTTACCAAGTA
ACTGACCCGAAAACTACTGAAATAATTCATTATGAAATATTTCTTATTAG
ATCCAGCTACCGAACGATCGAACTGCTGCTGAACCACAAACTGCGATCAA
TACAAAACTATCAACACCATCCAAACATCCACTATCGAACGATCGAACTG
CTGCTGAACCACAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067277-exon-scaffold_468-1575043694:22123..22765 | TCONS_00067277-exon-scaffold_468-1575043694:22123..22765 | Clytia hemisphaerica | exon |
| TCONS_00067277-exon-scaffold_468-1575043694:21600..21715 | TCONS_00067277-exon-scaffold_468-1575043694:21600..21715 | Clytia hemisphaerica | exon |
| TCONS_00067277-exon-scaffold_468-1510915933:22123..22765 | TCONS_00067277-exon-scaffold_468-1510915933:22123..22765 | Clytia hemisphaerica | exon |
| TCONS_00067277-exon-scaffold_468-1510915933:21600..21715 | TCONS_00067277-exon-scaffold_468-1510915933:21600..21715 | Clytia hemisphaerica | exon |
| TCONS_00067277-exon-scaffold_468-1491911889:22123..22765 | TCONS_00067277-exon-scaffold_468-1491911889:22123..22765 | Clytia hemisphaerica | exon |
| TCONS_00067277-exon-scaffold_468-1491911889:21600..21715 | TCONS_00067277-exon-scaffold_468-1491911889:21600..21715 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_468 | supercontig | scaffold_468:21600..22765 - |
Blast
The following BLAST results are available for this feature:
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