Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067262 ID=TCONS_00067262|Name=TCONS_00067262|organism=Clytia hemisphaerica|type=transcript|length=1251bp
gcCGTTTTCCGGCCGTTGTATCTTCACTAAAAAATCTCTACTAagttttg
gttttaaaattctCCTATTTACATTAtgtaaaaaatattcataaatttac
aagatcaaaaatttttgcatatgttacaccttttaaatttttcatttttt
tgtacaaaatcCACTAAAACATAAATAACAGttttcaaagttaaaaaaaa
aacacagatgactctccgtaattcgaattactctctataattcgaattat
cCATAAATAGCTTTAAATCCTTTTCAGGATTCGCACATAAAAAGTTCAAC
TGTGTTTTATCAGAATTCCATATTATAATCTAAAAGCTGTTATTACGTTT
AGCTTTCGATTTTGGACTGTTTGAAGGTGTTTCGACTTGGCAGCCATCTT
TAATATCATCTGAGCTTGCGCCAACTTCGACCAAATATTGTGCTACTTCG
TAGCTGCCTGACAAGACTGCTACTTTAAGTGGTGAAAGTTCTGACCATGT
TTTCAAGTGTACGTTAGCACCATGGTAGACTAAAAGTTTTACAATTTTGA
TGCTCCCCTGTGAACAAGCTTGATGTAGAGCGCTCACGCCAGGTGGACGC
ATATAGTTGATATCTATAATATCTCCGTGTtcgtttaaaagtttttcaag
agCGTGATAATCCTGATGTGTGACGTGATTGTAAATCATATTCTCGTGTG
ATTTCTCGTTTGTCGTTGACGATCGTCGGCCTAATCCTCGTAAAAACGAA
GGAGAAGGCGAGCGTGACCGAGAAGCGAGATCGTTTTTAACAGTTAAGTT
TGATGGTGATGTCGGTTGTGCCGAACCTCGTCGGTTGCGACGAAAAAGAG
TCGGTGATGGTGACGATGAACTGCTATCCTCGCAATCAATAATCGCTAAT
CGTTTATCACCCGTCTTCTTCTCTTTCcaaaatttctttaagaaaCTGTT
CGAAATTGATTCAGTGACTGTACTGTGGCTTCTTAAACGACGACCACCTG
TTACAGCGCTTATCCCAATATCAACATTCGGTGCGTACATAACTTCGCTA
GGCATCTTTATTACTTTTCTTCTGTATGTAAAATATTTGACTATAGTGAT
CAATGTCTTTGATGTGACtgaaaatttcttctttcaaaCTCTCTATAAAT
ACGATCTATCAAAAAACCGCAAACAATGACGTGAACGAGAGTCTACAGCT
TTTTTTATAGTGTTGACGTCCTATCGCTATGATTTCTAAAACTGATTTGA
T Run BLAST on NCBI protein sequence of TCONS_00067262-protein >TCONS_00067262-protein ID=TCONS_00067262-protein|Name=TCONS_00067262-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MPSEVMYAPNVDIGISAVTGGRRLRSHSTVTESISNSFLKKFWKEKKTGD
KRLAIIDCEDSSSSSPSPTLFRRNRRGSAQPTSPSNLTVKNDLASRSRSP
SPSFLRGLGRRSSTTNEKSHENMIYNHVTHQDYHALEKLLNEHGDIIDIN
YMRPPGVSALHQACSQGSIKIVKLLVYHGANVHLKTWSELSPLKVAVLSG
SYEVAQYLVEVGASSDDIKDGCQVETPSNSPKSKAKRNNSF Run BLAST on NCBI transcript from alignment at scaffold_466:396142..397392 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067262 ID=TCONS_00067262|Name=TCONS_00067262|organism=Clytia hemisphaerica|type=transcript|length=1251bp|location=Sequence derived from alignment at scaffold_466:396142..397392 (Clytia hemisphaerica)
ATCAAATCAGTTTTAGAAATCATAGCGATAGGACGTCAACACTATAAAAA
AAGCTGTAGACTCTCGTTCACGTCATTGTTTGCGGTTTTTTGATAGATCG
TATTTATAGAGAGtttgaaagaagaaattttcaGTCACATCAAAGACATT
GATCACTATAGTCAAATATTTTACATACAGAAGAAAAGTAATAAAGATGC
CTAGCGAAGTTATGTACGCACCGAATGTTGATATTGGGATAAGCGCTGTA
ACAGGTGGTCGTCGTTTAAGAAGCCACAGTACAGTCACTGAATCAATTTC
GAACAGtttcttaaagaaattttgGAAAGAGAAGAAGACGGGTGATAAAC
GATTAGCGATTATTGATTGCGAGGATAGCAGTTCATCGTCACCATCACCG
ACTCTTTTTCGTCGCAACCGACGAGGTTCGGCACAACCGACATCACCATC
AAACTTAACTGTTAAAAACGATCTCGCTTCTCGGTCACGCTCGCCTTCTC
CTTCGTTTTTACGAGGATTAGGCCGACGATCGTCAACGACAAACGAGAAA
TCACACGAGAATATGATTTACAATCACGTCACACATCAGGATTATCACGc
tcttgaaaaacttttaaacgaACACGGAGATATTATAGATATCAACTATA
TGCGTCCACCTGGCGTGAGCGCTCTACATCAAGCTTGTTCACAGGGGAGC
ATCAAAATTGTAAAACTTTTAGTCTACCATGGTGCTAACGTACACTTGAA
AACATGGTCAGAACTTTCACCACTTAAAGTAGCAGTCTTGTCAGGCAGCT
ACGAAGTAGCACAATATTTGGTCGAAGTTGGCGCAAGCTCAGATGATATT
AAAGATGGCTGCCAAGTCGAAACACCTTCAAACAGTCCAAAATCGAAAGC
TAAACGTAATAACAGCTTTTAGATTATAATATGGAATTCTGATAAAACAC
AGTTGAACTTTTTATGTGCGAATCCTGAAAAGGATTTAAAGCTATTTATG
gataattcgaattatagagagtaattcgaattacggagagtcatctgtgt
tttttttttaactttgaaaaCTGTTATTTATGTTTTAGTGgattttgtac
aaaaaaatgaaaaatttaaaaggtgtaacatatgcaaaaatttttgatct
tgtaaatttatgaatattttttacaTAATGTAAATAGGagaattttaaaa
ccaaaactTAGTAGAGATTTTTTAGTGAAGATACAACGGCCGGAAAACGg
c Coding sequence (CDS) from alignment at scaffold_466:396142..397392 >TCONS_00067262 ID=TCONS_00067262|Name=TCONS_00067262|organism=Clytia hemisphaerica|type=CDS|length=726bp|location=Sequence derived from alignment at scaffold_466:396142..397392 (Clytia hemisphaerica)
ATGCCTAGCGAAGTTATGTACGCACCGAATGTTGATATTGGGATAAGCGC
TGTAACAGGTGGTCGTCGTTTAAGAAGCCACAGTACAGTCACTGAATCAA
TTTCGAACAGtttcttaaagaaattttgGAAAGAGAAGAAGACGGGTGAT
AAACGATTAGCGATTATTGATTGCGAGGATAGCAGTTCATCGTCACCATC
ACCGACTCTTTTTCGTCGCAACCGACGAGGTTCGGCACAACCGACATCAC
CATCAAACTTAACTGTTAAAAACGATCTCGCTTCTCGGTCACGCTCGCCT
TCTCCTTCGTTTTTACGAGGATTAGGCCGACGATCGTCAACGACAAACGA
GAAATCACACGAGAATATGATTTACAATCACGTCACACATCAGGATTATC
ACGctcttgaaaaacttttaaacgaACACGGAGATATTATAGATATCAAC
TATATGCGTCCACCTGGCGTGAGCGCTCTACATCAAGCTTGTTCACAGGG
GAGCATCAAAATTGTAAAACTTTTAGTCTACCATGGTGCTAACGTACACT
TGAAAACATGGTCAGAACTTTCACCACTTAAAGTAGCAGTCTTGTCAGGC
AGCTACGAAGTAGCACAATATTTGGTCGAAGTTGGCGCAAGCTCAGATGA
TATTAAAGATGGCTGCCAAGTCGAAACACCTTCAAACAGTCCAAAATCGA
AAGCTAAACGTAATAACAGCTTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067262-exon-scaffold_466-1491911889:396142..397392 | TCONS_00067262-exon-scaffold_466-1491911889:396142..397392 | Clytia hemisphaerica | exon |
| TCONS_00067262-exon-scaffold_466-1510915933:396142..397392 | TCONS_00067262-exon-scaffold_466-1510915933:396142..397392 | Clytia hemisphaerica | exon |
| TCONS_00067262-exon-scaffold_466-1575043694:396142..397392 | TCONS_00067262-exon-scaffold_466-1575043694:396142..397392 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:396142..397392 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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