TCONS_00067228 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067228
Unique NameTCONS_00067228
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4032

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067228 ID=TCONS_00067228|Name=TCONS_00067228|organism=Clytia hemisphaerica|type=transcript|length=4032bp
TTTTCTTTCCCATTATAAAATAGGATGATGTAAGTGTAAGTCTTGTGAAT
GCCATTTGACTGTATTATCTGTTGTCCATAATAAATCTCATAATTCTTCT
TCTAGAtagtaaagaaaataatttaaaaaaagatttgtaATGGCATCTAT
AACACTGTCAGGCGAAGAGAAACATTATATCATAACAGGTGTTGAAGATG
ATTTTCGTAATGATGGCAGATCTTGTGAAGATTATAGAAGAATCTCGGTT
AAAACGAGAGTACTTTCAAGCACCAATGGTTCTGCTGATGTCACACtgGA
AGGAACGCACGTTATTTTTGGTGTAAAAGCGGAGATTGGTGAGCCAACGC
CAAGCCATCCGACCGAAGGAAGAATTGAATTTGCAGTTGACTGtACTGCA
AATGCTTCTCCAATCTTTGAAGGTCGTGGTGGTGACGATTTAGCATTGGA
ATTGAGTTGCGCgttaaaaagaactttttgtacTGGAGCTTTGGATCTCA
AGTCTCTTGGTGTCATTCCTGGCAAAGCATGCTGGATCTTACACGTTGAT
GCATTGGTTTTGGAATGCGGTGGCAATCTTTTTGACGCTTTATCAATTGG
CGTAAAAGCTGCACTTCACAGCACAAGATTACCGAAGCTACAAGTGATTG
GTGAAGGCAGCGAACAAGATATCGAGATATCTGATGACCCATATGATACA
GTACCGTTAGATGTTTCAAACGTTCCTGTTCTCGTTACTTTGAATAAGGT
TGGAACGCGTTACGTTGTAGACGCTACTGCTGAAGAAGAGAGCTGCAGTG
AATGTCAACTTTTGTTATCCGTCAATGAAAAAGGACGTGTTTGTAGCGTG
CAAAAACATGGCAGCGGTGCTCTTAATCCGGATTTGATCTTTGAAATGAT
GAGAgtTGGgcagaaaattggaaaaacagTAAACGATTCTTTGATGCGTT
TGCTACGAGAAGAAAATGTGAATGAAATGATTTGAAGGAGAGTGGAAGGG
TAAAGAGGAACAATCGAGGTATCTAAAATATTGACATATTGGGTTGTTCT
TTATTGAAACTGTTTGAGCTTCGATGAAGCGAAAGTAGTTTGTTGCTTGA
TCATGGTTGATGAAAACAGGCGAACATCGATTAGATAGTAACCTACGCAA
CAACTTTGGTATACAGAGACCAAAGGAAAGTCAAAGGGATATTTTTTTAT
CCTTGATAACGTCTGATTGGGAAACATTTTGATTGTATGTTGGCTAATGA
CATGTCATGTGTTTTTGGATTAATGCAATCTCGCCAAGGTGAATGAATTT
ATtataaactttcaaattttaccaCGATATACAGATTGAAAATAGGGCAA
TGGTTTTGTTTGAGATCTTAAATAAAACGTCAGCAGAAAAATTACTCAAG
TAACCCTTCTCTTTTTGCGCTTTAAAGTAGGCTTCGTTTTGATTCCCTTA
CCAAAACATAACTAATTTAGTTTCTAAAAAGTTGTTTCTACTTCTGGTAA
GCTTGGCACCTTTTTAATTTATAACTTGCCAAGTTTTTTAATCAGTATAG
TTTCGAAGTGCCTTTCATTAGGTACATGGTAGAAAATGAAACGCCGCATA
ATTCGTTGAATTTGCGTTGCTTAATTCCGGAGTGACAATAGTGAGTAAAA
GTCGACTAATGTACTTTTCGTATGAAATAGGGAAAGAGAAAGCCGCCTTC
ATTACCCTTTAAATATCTCAGTCTCATCGATAATCAATACATCTAACATT
TCCAGTACTTCATGCATGGAACGTCAACGATGTCTTTACTCTCAAGCttt
taaattattaaaatttagataatacataattttgttttgttaaagTACTC
AGCGCTTTTTTCGTCTTTCTgaataattttgttttctctttgttttctct
tttcttttttcgtCGTTGTCGACTTTCGAATATTCGAATCGACGATCACG
CGTAATAAAGTGACGTCAATAATTGTTCTCGATAACATTGCAGTGTGCTA
GTCGTTTGGCACTCATTCTAACGTCAAAGTAGTTAAGTTACTCACGTCAA
AGATGGATGCAGAGGACTACGCTCATGCTATCCTACGAATTGTTATTGAC
ATTCTTATTACTAATTGAAGAATATATTAGAAGTATCTTTACTTGGGCAA
ATGGCTTAATAGAGCAGGCTATGTTTGCTATTATGATGTTTTTTCCAGCC
CATAACAAGAAAGAAGGGGAAATTCATTTCGAAGAAAACCACTTACGCGA
TGTCTTGAAACGAGTTGACGAATTGAGACAGGCTGGACAATTGGGCTTTT
GTGATGTTATCTTACGAGTATCCAGTCAAGAGTTTCATGCTCACAAGCTC
ATTCTTGCTTCTTGCTCAGACTATTTTTATGCTATGTTCAATGGCAACAT
GAAAGAGAGTAAAGAACGGATTGTGGATATAAATGGCGTCGATGTAGAAG
TAATGAAgcttgttttaaattttatataCACCGGAGGTATTCCACTTAGT
AATGATAATGTAGAAGATATTTTGCAAGCAGCCAATCTTATGCTTATAAA
ATCACTTAAAGATGTTTGTTGTAGGTTTTTAGAAACTTTATTGACAGTAA
ACAACTGCTTGGGAATGCAAAAGTTTGCCGAGTCATATTCCTGTGAAGGT
TTATTTGAAAGTACGACCAATTTCATTTGTGACAACTTTGGATATATCAC
CGAAAGTGACGAGTTTCTTCAACTGCAAGCTGTGCAACTTGTTCCTATAA
TATCTAGCGATGAATTGCGAGTTTTAAACGAAGAAAAGGTTTACGAAGCT
TTGATTCGATGGACAAAGTACAGCTTGTCcgaaagaaagaaatatttccC
GGAACTTGTACAACACATTCGGTTACCAATGTTACCGCCGGATTACTTAG
TGGATCAAGTAGAATCTGAATCTCTGTTCGTGGAATTTCCAAAATGTAAA
GAACTTTTGGTAGAAGCTCACCACTATTTACTTCTCCCGAATCGCAGAGG
TGTTATGGCGCAGACGGCAAGAACAAGACCGAGGAAATACGAAAACAACA
ACGAAATCTTGATTGCATGTGGTGGAAACGGCGAATCATCAATGAACACT
ACTATTTTTTCATACAACATGGCGAAGAGCAGCTGGAATGAGTTACCTCG
ATTGATTCCTGAGCGTGGATATCATGGACTTGCTACTATTGATGGTGAAA
TGTATCTTGTTGGAGGCATTACAACAAGCCGTGCAGAAGGACGTGAAGGA
CAAACAGAACTACTAGACACGGTCAAGAAATTCGACACAGAACAGAATGC
TTGGGTCAATTTGGCAGCACTACACGTCAAACGAAGCAAGATGTCAGTCA
TCGCGTGCAGTGGTTTGATTTTCGTTGTTGGTGGTTTTGATGGAAGTCAG
ACCTTGAACTCGGTTGAATGCTACAATCCCGTAAATAACCGTTGGAAGTT
TGTGGCACCTATGCTGACACATCGGCGATGCACGACATCTGTATCTAATG
GCAACTTTGTTTTCATTATCGGTGGTCACGATGGGGCACAAATCTTAAAC
ACCATTGAAACTTATGATGTCGAAAGAGACCAGTGGTCAGTTTCAGACAT
CGCTCCTATGTCTGACCGCCGCTCATTCCCGTGTGCTGTAACAATCAACG
ATGATATTTATGTCATGGGTGGCTATGATGGTCACGATACGCTACGAACG
TGCGAAATCTACAATATGACACGTAACGAATGGACCAGCATTGAGCCGAT
GAATACTGCTAGATCGAATGCTGGTGCAGCACATATCAACCGTAAAATCT
TTGTCGTTGGTGGCTGGGACGGCGTTAGTTTGAATTCAGTCGAATANCAG
AAACCTGGCGACGAAAAGCCATTTGCCGAATCCGATTCTGATTTTCATGA
TAGCGATGGCTTTAGTAACGGCTTAGGTCGCCAAGACAGACCGTGGAGAG
TTTTCTGTGCTCGTACTTTGATTGGTTAAATCTTTATAAAGCAATTATCT
TAGGCTTAGTGActtttattttggaaattctC
Run BLAST on NCBI

transcript from alignment at scaffold_466:325054..338486-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067228 ID=TCONS_00067228|Name=TCONS_00067228|organism=Clytia hemisphaerica|type=transcript|length=13433bp|location=Sequence derived from alignment at scaffold_466:325054..338486- (Clytia hemisphaerica)
TTTTCTTTCCCATTATAAAATAGGATGATGTAAGTGTAAGTCTTGTGAAT
GCCATTTGACTGTATTATCTGTTGTCCATAATAAATCTCATAATTCTTCT
TCTAGATAGTAAAGAAAATAATTTAAAAAAAGATTTGTAATGGCATCTAT
AACACTGTCAGGCGAAGAGAAACATTATATCATAACAGGTGTTGAAGATG
ATTTTCGTAATGATGGCAGATCTTGTGAAGATTATAGAAGAATCTCGGTT
AAAACGAGAGTACTTTCAAGCACCAATGGTTCTGCTGATGTCACACTGGT
AAAATATTTTACTTCATTTCCAGACGTAAATTCTTGGTTATTTGCATATG
TGTCTCGTTAGATATGACAAGAGTTGACAAAATTCATAGTTTCTACATTT
TGATAAAACCCAAACAAGGGGGGGGGTGTTGAAAGTTTTAATTTAAGGGG
GTTGCCAGTTAAGTGGGACTTTCTACATAACGGGATCTTCATAAAATTAT
ATACAAGAATTTCAAAATTCTTTCTTTTAAAAAAAAACTGCCTGTGTTAC
TATAAAATTGCCTTTTGATTTCCTAGCCCCCCCCCCTATTAGGGTCTGAA
TTTAATGTATTCCCTAAGGGGGGGTTACCACTTAAGAGGGCTTTCCTACC
TAAGGGGGTTTTTGACCCCTCTACTAAACACTATGAAATTCTTATTTCAA
ACACGCCAGTCTTCAGTGAACTCATTAAAATATTGCTCTACTAAATTATG
GAGCATTGTTTATTAAGATAGAAACCTTCAAAGTTAAAATGTCCCCAAGT
ATAGAAAGTTTTTGTGGGTTTTTTAATTTTCTTAACCCTAACCATAACTC
TTTTAAAGATTTTCCGAATGATTATCTAGGTTTTATTTACTATGCTATCA
TCCTGCAATGACATTCAAAATCCCCCTCCTGACATTTCTATCCTGTGTTG
CAGCTCCAAGTTCCTGATGATGTCATAAACATTTGGAACCAGAATTAAAA
TTAATAAAACCTTTATGGAAACTTTTCGACTCAACACTGTCTTTGGTACT
ACTTGCACTAATTTGTTCTGTTTTTACTTTCAGGAAGGAACGCACGTTAT
TTTTGGTGTAAAAGCGGAGATTGGTGAGCCAACGCCAAGCCATCCGACCG
AAGGAAGAATTGAATTTGCAGTTGACTGGTTTGTTTAGATTAGAACTCTT
TCTTTTCTGTCTGTTTTATATACAAAATTAAATATAATTGAAGTACAATG
CCTTGATTCAAAATATTTTCTACTATCAATCTGCAGTTGCTTTGTTTCAA
AAGTATCGACTTAGACAAGAGAAAATTGAAAATAATAGAAAAACAGTTCT
CTGATTACCTAAAGTATTCTAATCGTTTCTATTGAAAAAATAAATATATA
TTTTTGTATGATTAAGATTCACCCTAAATAAAAGTTGCAGCAGCAAGCGA
CAATAAAAGAAATCTATTTAAGCTCCCGTTTGGGCCTTAAACTCCCTTTT
TCATCACCCCAATTTTGTTCAAATTTCATTTCAGTACTGCAAATGCTTCT
CCAATCTTTGAAGGTCGTGGTGGTGACGATTTAGCATTGGAATTGAGTTG
CGCGTTAAAAAGAACTTTTTGTACTGGAGCTTTGGATCTCAAGTCTCTTG
GTGTCATTCCTGGCAAAGCATGCTGGATCTTACACGTTGATGCATTGGTA
TGTGTCTGTTAATAATGTCATTAAACCCTTAAAATTTTACAATAACAGAG
GGAGGGTTTTTTTATCAGGCATGTTAAGATTTACAAATGCTTTGTAAAGA
TATAAGGGTCGAGTGGTTCGATTAATCCGTTATAGCCCTGGTTTTGTGAT
CACCCCGATGAAAACAGATTTTATTTGATCGAAAAAAATCGTTCGATTTT
TTACACCAATCCATTTTATTATTACAGTAATCAATGGAATATTTTATCAA
AATATATTTATCGGATTCGAATGCTCTAATTTTTGTGGCAGTAAAAACAG
CTCACTAAGTTCAGGCTTTCCCAAATCACCCTCTCAAACCATATGTTATT
GCTGATACTAATAACTACTTTTCTTTGCATTATTCAATCAGGTTTTGGAA
TGCGGTGGCAATCTTTTTGACGCTTTATCAATTGGCGTAAAAGCTGCACT
TCACAGCACAAGGTATGGAATCCTAACAAGTTTGAGTTTATCGACCCATC
GGTATTCATTTGAACGCTTATCGTGGCTTGTTTCACAGATTTAGTTTTGC
CTACGTTTTGGGAGATTCTTCTCCCATCATGGTAAGGTGCTTTCGCCACT
CTTCTTTTTTGGCATCTAGAACTTTACGGTACAGTACACTTTTAGAATCA
GTTTATATATATCTTCTTTAATTCTTGTCGGTTATCAAAGAAATAAAGAC
GTCTCTCCTCCTGTGTCAACTTTATTGGAATATCTCAGCATAAAGACGGA
AATCTGTTTGTCTATCAAGGCTTTCCGCCCGACAACTTCAAATAAAAGAA
AGTTCCCTGTAACACTGTAGAGCTCTCTCTTTGTCTCGTTTCACCGTATA
TTTTAAGGCGGGGCGTTTAAGTAATTATTTTTACTATTTGTGTGAATAAT
TTGAGATATTCTTATGGTATTTATTTTCCACGAAGATAATTACAACTAAA
AGCTAGCATATAATAATGAGATGAAAAAGATATTTGCATGACATGATAAG
GCCGTATTTGGGGTTTATGCTTCAAGATGAGGAATATACAGTATGTTAGC
AAGTTCAATTTCATTCTTATCCCTCTTTTTTTCATATAAAGATTACCGAA
GCTACAAGTGATTGGTGAAGGCAGCGAACAAGATATCGAGATATCTGATG
ACCCATATGATACAGTACCGTTAGATGTTTCAAACGTTCCTGTTCTCGTT
ACTTTGAATAAGGTCAGAACTTGTTTTTCTCAAAACGTAAAAAATCAATC
TGGGCCTCGTCTTCGAATATATACGACACCATAACTTTTGAACATGTGAA
GCAAATTTAAAGCATGATTGCTCAAAATTTAAGTTAGTCATTCTTCTTTA
TAATGGCTTCACTTGGANTTAAAGCATGATTGCTCAAAACTTAAGTTAGT
CATTCTTCTTTATGATGGCTTCACTTGGAGACAAAACTGCCGTTTTCGAA
AATCAAAATAGAAAACTCAAGTTCTTCTAATGTTATATGGGCGGTAGACT
GTAGTAAAGTCGTAAAAATCTAAATGTCACCGTCAATAAGAAGTAAAAGT
TATCGCATGGTACCGAGTACAATATGGGATATATTTTTCGAGTTTAGACT
CGCCTAAAGGCTCAAAAAATATAGAAAATTCTGTATAACTAGTTTATCGT
CAACTTGAAAGATATCAACGAAATTTATTACATCCTCTCTCTCCATTTGT
GTCCCTTTTTTTGTTTTGTTTTTCTCTTACAATCTTTCTTCTCCTCTATT
TTGATGAAATCAACATCAAAACATTCGAAAAAAGAATCGAATAGTCATTA
AAAAGATATAATAAAATATAGTTTTTTAGGATTTCAAGAAATCTGTGCTA
AAATCAAACGATTCAAAGCGACAAGCTAAAAGCCCATACTCAATAATTTA
ATGCTTGCTTTAGCCGTTAGGAAGTTTCATGAACATAAAAGAGTAAAGAT
TAGCGTATAGCTTATGACCAAAGCACCAATTCAGCCCTCTATACAATTCC
GGTCGGTAAATGAGTACGACTAAGCACTTCTGCAATTGGTGGGTCAATCA
AGGGTCTTCGGGTCTTCACAGGTCGCGCTGTGTTGGCTTTACCACTAATA
AATACTTGCTTTAAAGATCCTGCTTCCTCGCTTGGCCATAGGATTAGTTC
AGTTACGGAAACGGCTAATTTCATTGCTATATTCATTGATGAAATGTTTT
TTGTTTTTTTTTATCTTTTCCAAATTTATTTCATATTAAAGTCAAGTCAC
ACCTTATATTGTTTTCACTTTCTGTGTCAGGTTGGAACGCGTTACGTTGT
AGACGCTACTGCTGAAGAAGAGAGCTGCAGTGAATGTCAACTTTTGTTAT
CCGTCAATGAAAAAGGACGTGTTTGTAGCGTGCAAAAACATGGCAGCGGT
GCTCTTAATCCGGATTTGATCTTTGAAATGATGAGAGTAAGTTTTCCAAA
AAAAATCATTCTACGTGGTTGATCTTTCAGCCAATCGAGAGAAAGCTCCA
AGTAGAAGATTTGTTTACCAATGTGAGACAATTCTAAGATATACGTCTAG
TTTCCTGATACAGTTACATCAGTCGTTTTTTTCCGTTTTCAGAAAATAAT
CTAACTATCTTTTGAGAAAGGGAAAGATTTTTTCGGCAAATAAACTGTCT
CTCTCTAAATTCTTTACGAAAAATAGATTTTAATCTGCAATCCGGCAAAC
TTCCGCGATGGAATTCACTCGTTGTTGTTTTATTATTTTAATGATTTTCT
TTTCAAAGGTTGGGCAGAAAATTGGAAAAACAGTAAACGATTCTTTGATG
CGTTTGCTACGAGAAGAAAATGTGAATGAAATGATTTGAAGGAGAGTGGA
AGGGTAAAGAGGAACAATCGAGGTATCTAAAATATTGACATATTGGGTTG
TTCTTTATTGAAACTGTTTGAGCTTCGATGAAGCGAAAGTAGTTTGTTGC
TTGATCATGGTTGATGAAAACAGGCGAACATCGATTAGATAGTAACCTAC
GCAACAACTTTGGTATACAGAGACCAAAGGAAAGTCAAAGGGATATTTTT
TTATCCTTGATAACGTCTGATTGGGAAACATTTTGATTGTATGTTGGCTA
ATGACATGTCATGTGTTTTTGGATTAATGCAATCTCGCCAAGGTGAATGA
ATTTATTATAAACTTTCAAATTTTACCACGATATACAGATTGAAAATAGG
GCAATGGTTTTGTTTGAGATCTTAAATAAAACGTCAGCAGAAAAATTACT
CAAGTAACCCTTCTCTTTTTGCGCTTTAAAGTAGGCTTCGTTTTGATTCC
CTTACCAAAACATAACTAATTTAGTTTCTAAAAAGTTGTTTCTACTTCTG
GTAAGCTTGGCACCTTTTTAATTTATAACTTGCCAAGTTTTTTAATCAGT
ATAGTTTCGAAGTGCCTTTCATTAGGTACATGGTAGAAAATGAAACGCCG
CATAATTCGTTGAATTTGCGTTGCTTAATTCCGGAGTGACAATAGTGAGT
AAAAGTCGACTAATGTACTTTTCGTATGAAATAGGGAAAGAGAAAGCCGC
CTTCATTACCCTTTAAATATCTCAGTCTCATCGATAATCAATACATCTAA
CATTTCCAGTACTTCATGCATGGAACGTCAACGATGTCTTTACTCTCAAG
CTTTTAAATTATTAAAATTTAGATAATACATAATTTTGTTTTGTTAAAGT
ACTCAGCGCTTTTTTCGTCTTTCTGAATAATTTTGTTTTCTCTTTGTTTT
CTCTTTTCTTTTTTCGTCGTTGTCGACTTTCGAATATTCGAATCGACGAT
CACGCGTAATAAAGTGACGTCAATAATTGTTCTCGATAACATTGCAGTGT
GCTAGTCGTTTGGCACTCATTCTAACGTCAAAGTAGTTAAGTTACTCACG
TCAAAGATGGATGCAGAGGACTACGCTCATGCTATCCTACGAATTGTTAT
TGACATTCTTATTACTAATTGAAGAATATATTAGAAGTATCTTTACTTGG
GCAAATGGCTTAATAGAGCAGGCTATGTTTGCTATTATGATGTTTTTTCC
AGCCCATAACAAGAAAGAAGGGGAAATTCATTTCGAAGAAAACCACTTAC
GCGATGTCTTGAAACGAGTTGACGAATTGAGACAGGCTGGACAATTGGGC
TTTTGTGATGTTATCTTACGAGTATCCAGTCAAGAGTTTCATGCTCACAA
GCTCATTCTTGCTTCTTGCTCAGACTATTTTTATGCTATGTTCAATGGCA
ACATGAAAGAGAGTAAAGAACGGATTGTGGATATAAATGGCGTCGATGTA
GAAGTAATGAAGCTTGTTTTAAATTTTATATACACCGGAGGTATTCCACT
TAGTAATGATAATGTAGAAGATATTTTGCAAGCAGCCAATCTTATGCTTA
TAAAATCACTTAAAGATGTTTGTTGTAGGTTTTTAGAAACTTTATTGACA
GTAAACAACTGCTTGGGAATGCAAAAGTTTGCCGAGTCATATTCCTGTGA
AGGTTTATTTGAAAGTACGACCAATTTCATTTGTGACAACTTTGGATATA
TCACCGAAAGTGACGAGTTTCTTCAACTGCAAGCTGTGCAACTTGTTCCT
ATAATATCTAGCGATGAATTGCGAGTTTTAAACGAAGAAAAGGTTTACGA
AGCTTTGATTCGATGGACAAAGTACAGCTTGTCCGAAAGAAAGAAATATT
TCCCGGAACTTGTACAACACATTCGGTTACCAATGTTACCGCCGGATTAC
TTAGTGGATCAAGTAGAATCTGAATCTCTGTTCGTGGAATTTCCAAAATG
TAAAGAACTTTTGGTAGAAGCTCACCACTATTTACTTCTCCCGAATCGCA
GAGGTGTTATGGCGCAGACGGCAAGAACAAGACCGAGGAAATACGAAAAC
AACAACGAAATCTTGATTGCATGTGGTGGAAACGGCGAATCATCAATGAA
CACTACTAGTAAGTAATTCATGAGTGATCATTCTCCTTAAATGTCTGCTT
TCATCGGATATTTCTCTTGGTTAGCCTTATTGATTGTCTCTCTGGGATTT
TCGTAGTAGCTACTGTATTATAAGTTTGCGATAAAAGAAATTTCTTTTGA
TGGCTGTGTTCACCAAATAGACCTTTTGCTTGCCTCGATGCCATTTTGAC
ACCATAATAAAAAAGCGGGCGAAAGCATTTCGTCATAAACATTATATAAT
CTTAGCGACAGAATAACCTGATAGTGGATCTGTTTCTTATTTTTCGATAC
ACAAGTGTCTGCGCGGTAAACTAGAAGTACAAACACAGTCAATAGACTAT
TTGACATTTTAAGAATCTAAATTACCAGTGGATACCCCTTAAAACCACAT
ACCCCTTAAAACCCACAATGTTGCATTTTTGGCTTTCATAACTACCAGAT
TTAATTTTATGTGGTATGTTTCACTTTTTTACAACCTCTTGTAAATGTTC
TTTCATAAAATACCAAATTTTAAGGATTTTAAAGATGCTAAAGTATCTTA
AAATTCGAAGTTATTCAAAATTTTATCAAAAATCCCTTCAAAAAATCAGG
TTTTTTGGACCTAGAAATTACACAATTGAATTTAAGGTCATAAAACCTGC
ATTTTTTAGATACCTATACTTATGGTAGGTATAAAAAAATCATTTTCATC
TTCGTGAATAGACCCCAACGAAAATGACAGGCCCTTAAAATTCTACTTTA
AAGCACTTTTATGGTGATGATCAATAAAATCTGAAAATCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTAGATAAAAATTAAACGGGTGGGAATTGATCTACTATTAGGTTAT
CATTTGAGTCATTACGTAATGTTTTCAACGCTAATTCATTATGTAGTCAA
AAAGACATCGTGGCTAGCAAAAGGTCTATAACTTAGCGACTATTTTCACT
TTTGAAGACGACGGAGTGACTGAAGTGATTTGGAATAACCCGCAGTTTTC
ACCCGCAAAATCGAGGACGGTAAAAGTCTTTGTTTACCATCGTCCTCAAT
CGATCAGGATCTAGACAAATATAACCTTTTCGGTCGAAGAAAATCACACA
TACATAAACTCTACTCATCTCATAATACTTAACATACGGGAACATCCCAT
GAATTTTTTTTACTAAAAGCCTTATTTTGAAACTATATTTGTAAACTATC
TTAACTTTCAGTTTTTTCATACAACATGGCGAAGAGCAGCTGGAATGAGT
TACCTCGATTGATTCCTGAGCGTGGATATCATGGACTTGCTACTATTGAT
GGTGAAATGTATCTTGTTGGAGGCATTACAACAAGCCGTGCAGAAGGACG
TGAAGGACAAACAGAACTACTAGACACGGGTAAGCTAAGAGATTCAATCA
ACAGTTTGATATATATCAAATATTATAAAGGAGATTCCGTGGATAAATTC
TCCAGAAAATTTACCAAACAGCCATCAAATCTACCTTATATAAGTCGCCG
TACGTTATATTAAAAGGGAATTCGAAAATCCTTTCATTCATAATTTCTTA
CACGCTTTTTTTTATAAGAACACGAGGCTGAAAATCGACCAAAACCAAAT
GACAAATTAAGAACAATCCGCTCAGATTTTAGAAATTGCTAAGACATTAC
TCAGCAGACTTTAAGCAAAGAAACTAAGCGTATCAAAAGAACATCGTAAG
AATATTTAAGCCTGAAAATTAAAAAAAAAACTAAGAACATCCAAGACTTA
ACCAAAATTTACTGGTTCTTATAAAAAAGCGTGTATTTTACTTTCATAGT
CTTTTTTTTTTTTTTTCATGCGTGATTTTTTCAATCTTTCAGTCAAGAAA
TTCGACACAGAACAGAATGCTTGGGTCAATTTGGCAGCACTACACGTCAA
ACGAAGCAAGATGTCAGTCATCGCGTGCAGTGGTTTGATTTTCGTTGTTG
GTGGTTTTGATGGAAGTCAGACCTTGAACTCGGTTGAATGCTACAATCCC
GTAAATAACCGGTAATCGACAATATGGTTTTTGTTTTTTGAGCTTTCTCG
CCCCTTTTTACGGCTATTCCCGGTACCTTCATGTACGTGTCTAATGAACG
CCCTCCCCTGTTTATTAGTTCAGTGGAGTCTCAGTAAATCGAACACGAGC
GGGGTAGTAGCATAGAGAGGCTTTTGTGTTGCAAAAATTTTTAGGAGAGC
AGATTTTTATAGCACAGTAATTATCTTTTTATGATATGAATATCTACTCT
CCTACACAGTTATAGAGGTTCGAGTTAAGGAGACATTCGAGTTATAGAGG
TTCGAGTTACGGAGGCTCCACTGTATTCCGATTTTTAAACTACACCTGAG
AGTAGAAACAAATTGAAAGTCACTTAAGTATAGCCGTTTCTTAGGACAAT
TTTCAAACTTCAAAGCAATTTTTATGATTTTCAAGTCTCCCCTTCTTTCA
AGTACTGTAGTGCAAGATAGCTTTTAGCACTTTTACCAGTACTTATACAG
AAAATGGTTAATTACATTTAGGTTCTAAATTAATGTGTAATGTATATTTA
TTTCTTTAGTTGGAAGTTTGTGGCACCTATGCTGACACATCGGCGATGCA
CGACATCTGTATCTAATGGCAACTTTGTTTTCATTATCGGTGGTCACGAT
GGGGCACAAATCTTAAACACCATTGAAACTTATGATGTCGAAAGGTTCGT
TTTCTGTTGCATTTCCTTAGATTTATTTGATTCGACTATTATGACCTTGA
AACTTTCAATGCTATACTCTTCATGATTGTGTAAAGTCATCATCAGCTTA
GCTTTCTGGCCTTTTCAATAAATCTAAATGTGTGATTTAACATTCTCGAG
ATCATGTTCAGACGTTACTGTTGGTTCCGAAACTAGTGTGAACGTCAAAA
TTCGAAACGTCAAAAAAGAAGACGTTACAAAGTAAAACAGATCGAAACAG
CTTCGCTCAACTATTTTCATCGGAACGGAACTGCTCCGTTTTCTTGCTCT
GAAAGGTTCAGCAACCACTATGGACAATCTCGATCCGTAACAGAAACCAT
ACCGGAACGATACGAAACGGTAACGTCTGAACATGGCCTAAGAACTAAAA
AATTGGGCCATTCCATTTTATATCCATACAGTTGGGTGGACGACATTTCA
AGAGGGTAATCAGAGAGAATTTCCAAGGGGTATAAAGGTGTATTTTTCAT
TTTTCCAGGGGTAAAAGGTTATTTAAAATTTCCAGGGGTAAAAGAATGAT
TTTAGTTCGTGTACCCTCATTTTTAAGGTATGAAAATAATTTTTCCAAGG
GTTATTTTACAAATTTTGTAATTTTCTTGGGGGTATCCACACATTTCTAA
AAATCTTCTTTGCCTTGAAAAGATTCGTCCACCCCACTGTAAAGAAATTT
GATGGAAAAGTCCATTGTAAACAACAAGTGATTTTTAAAAGTTCAAAATC
TAAGACTAATTTAACTTGAAACGGCGATTAACAAAACTTTGATCATCGAA
AATAGAAAACCTGTTTGCATTGCAGGGATAGTTTTCTGTTATTACTCCAG
AAAAATCAAACATAATTGGATTTGGGATACGTCCATATCCGTCATAATGA
GATTGAAANTTACTCCAGAAAAATCCAACATAATTGGATTTGGGATACGT
CCATATCCGTCATAATGAGATTGAAAATCATGCTAACCATTTCAACATTT
CAATATTTCAAAATCTTTTAGCACCGATACGCTTATCAAATCATAAATAT
ATTCAGTTTGAATTGCAGACCTCTAAAAAACTTCTTTATGAGGAGCATGA
ATGTACGTCAGTGGTTGCCAGAAGAAGCCTGGATTGAATTGTTGTATTTC
TATAAATGTCTGAGTCCGAGACTTTTTATACGGTTTGAATATATTTTCAT
ATTTCCTCGGGGAAGCCATAGCTCGCAACGCCGGGGGTAGCTATGTTCAA
AAGATTTCAGAAAGAGGGGAGGGGAGAGAATTTTTTGTAGAAAGAGGAAG
TTCTCAGAAAATGGAGGTCCATCTAGAAAAAGAGGGGTTGAGCTGTCAGT
GGTGTGTTTTTTGTGTTTTCCAAATTAGAAGTTTGAATTTTGATTATTAA
TTTACAATGCACTGCCTTCTTTCTTTATGTTATACACCAGTTAAGATTTC
TTTATTATTTGCTTATTTACACTGTTCGTTCTTGCTTTTTTACCGCTAGA
ATCATGGTGGGATTGTTGAGAGGGGGTAGCATCAAATTTTAAAAGGGAGA
AATAGTGACGCCCTTCACTTTTCAAGAGTCGGGGTAAACATTTAACTTGG
GGAAAAGAATTTTTCGGATTTTTCAGCCTAAATTTAGAAATTTTCTAACG
GATATATAATTCTTTTTTTCTAGGAGATATTTTACTTACCAATTTTTTGC
ACTTATAAAAATGTTTTTGACCTGAAAACTCGTTTATTCCCTGTGGTTGT
AGCCTAGAAACCTGGCGACGAAAAGCCATTTGCCGAATCCGATTCTGATT
TTCATGATAGCGATGGCTTTAGTAACAGCTTAGGTCACCAAGACAGACCG
TGGAGAGTTTTCTGTGCTCGTACTTTGATTGGTTAAATCTTTATAAAGCA
ATTATCTTAGGCTTAGTGACTTTTATTTTGGAAATTCTCTATATCACGTC
TAAAGACGAAGGATGTTTCAGAGATGAAAAGGCGAATATTTTTTAACAAA
AAAGTTAATTGTGTTACTTCATAAAGCTATGAGATTGGGTGTGTAGGTGT
AATTTGGTTCAATGCCAACAGTGTAACAGAAAAGAGTCAGGGCCAGATTC
TGTGTCTACTATTGTTGCGATTAATAGTTCAGTAGCAGTTTCTTTAAATA
ACCATTACACCTTTATGATTCTTCTAGAGACCAGTGGTCAGTTTCAGACA
TCGCTCCTATGTCTGACCGCCGCTCATTCCCGTGTGCTGTAACAATCAAC
GATGATATTTATGTCATGGGTGGCTATGATGGTCACGATACGCTACGAAC
GTGCGAAATCTACAATATGACACGTAACGAATGGACCAGCATTGAGCCGA
TGAATACTGCTAGATCGAATGCTGGTGCAGCACATATCAACCGTAAAATC
TTTGTCGTTGGTGGCTGGGACGGCGTTAGTTTGAATTCAGTCGAATANCA
GAAACCTGGCGACGAAAAGCCATTTGCCGAATCCGATTCTGATTTTCATG
ATAGCGATGGCTTTAGTAACGGCTTAGGTCGCCAAGACAGACCGTGGAGA
GTTTTCTGTGCTCGTACTTTGATTGGTTAAATCTTTATAAAGCAATTATC
TTAGGCTTAGTGACTTTTATTTTGGAAATTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041996XLOC_041996Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067228-exon-scaffold_466-1575043694:338189..338486TCONS_00067228-exon-scaffold_466-1575043694:338189..338486Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:337309..337403TCONS_00067228-exon-scaffold_466-1575043694:337309..337403Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:336790..336952TCONS_00067228-exon-scaffold_466-1575043694:336790..336952Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:336325..336395TCONS_00067228-exon-scaffold_466-1575043694:336325..336395Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:335575..335695TCONS_00067228-exon-scaffold_466-1575043694:335575..335695Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:334351..334506TCONS_00067228-exon-scaffold_466-1575043694:334351..334506Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:331829..334028TCONS_00067228-exon-scaffold_466-1575043694:331829..334028Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:329008..329175TCONS_00067228-exon-scaffold_466-1575043694:329008..329175Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:328376..328544TCONS_00067228-exon-scaffold_466-1575043694:328376..328544Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:327693..327827TCONS_00067228-exon-scaffold_466-1575043694:327693..327827Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1575043694:325054..325509TCONS_00067228-exon-scaffold_466-1575043694:325054..325509Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:338189..338486TCONS_00067228-exon-scaffold_466-1510915933:338189..338486Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:337309..337403TCONS_00067228-exon-scaffold_466-1510915933:337309..337403Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:336790..336952TCONS_00067228-exon-scaffold_466-1510915933:336790..336952Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:336325..336395TCONS_00067228-exon-scaffold_466-1510915933:336325..336395Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:335575..335695TCONS_00067228-exon-scaffold_466-1510915933:335575..335695Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:334351..334506TCONS_00067228-exon-scaffold_466-1510915933:334351..334506Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:331829..334028TCONS_00067228-exon-scaffold_466-1510915933:331829..334028Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:329008..329175TCONS_00067228-exon-scaffold_466-1510915933:329008..329175Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:328376..328544TCONS_00067228-exon-scaffold_466-1510915933:328376..328544Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:327693..327827TCONS_00067228-exon-scaffold_466-1510915933:327693..327827Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1510915933:325054..325509TCONS_00067228-exon-scaffold_466-1510915933:325054..325509Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:338189..338486TCONS_00067228-exon-scaffold_466-1491911889:338189..338486Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:337309..337403TCONS_00067228-exon-scaffold_466-1491911889:337309..337403Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:336790..336952TCONS_00067228-exon-scaffold_466-1491911889:336790..336952Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:336325..336395TCONS_00067228-exon-scaffold_466-1491911889:336325..336395Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:335575..335695TCONS_00067228-exon-scaffold_466-1491911889:335575..335695Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:334351..334506TCONS_00067228-exon-scaffold_466-1491911889:334351..334506Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:331829..334028TCONS_00067228-exon-scaffold_466-1491911889:331829..334028Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:329008..329175TCONS_00067228-exon-scaffold_466-1491911889:329008..329175Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:328376..328544TCONS_00067228-exon-scaffold_466-1491911889:328376..328544Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:327693..327827TCONS_00067228-exon-scaffold_466-1491911889:327693..327827Clytia hemisphaericaexon
TCONS_00067228-exon-scaffold_466-1491911889:325054..325509TCONS_00067228-exon-scaffold_466-1491911889:325054..325509Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:325054..338486 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0.478827 tpm) - - (6.0231 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.0231	5.97604	5.68197	5.95621	2.87486	2.11169	4.74469	4.12038	1.75546	1.43066	1.9029	1.6837	0.848709	0.891544	1.32252	1.29202	1.12466	1.59514	0.859418	0.478827	2.20694	1.63542	2.74058	3.56216	4.77319	2.4186	0.824843	0.931668	1.01998	1.22248
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067228 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
5001000150020002500300035004000Expect = 4.71e-114 / Id = 36.63SequenceKLH20
Match NameE-valueIdentityDescription
KLH204.708e-11436.63Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE... [more]
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