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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067218 ID=TCONS_00067218|Name=TCONS_00067218|organism=Clytia hemisphaerica|type=transcript|length=891bp
ATTTCTTTGAATATTCAGGGATAAAATTCCCAAACCCCGGCAGCTAGGTC
AGCCATAGGCTGCCAACACCCCTCTATTATCAATCCTCCTAATTTGTTTG
GACAAAAAGCGATTCAAATATAAAACGAAAATCTCAATTTCACGAGCAAC
AATCTCAATCGATTTGGCAGGATCTATTTTTCCGcgaaaaactcgcgaaa
acggGAAGTTTATTATccgctaaaattaatccaatAACAGTAGTCCGTGT
ATCAATGTCCGTGCTAGTTAGTATGATATAATATCAATGTCGATCATAAC
TGACGTCCATTTGAGGCCCTTCATGATGTTCAACAGCTCGACAACAGAAA
CAATGCTTCGGTGTGTCTGCTGTTAAGAACTCGTACACATCTACTATCAA
GCTGCTTTTGAATGCTGGAAGACGTTTCACCCAACGTACCTTTTCATGAA
ATTCTGTCGTGTTACGCTGTTGAATTTCTTCTCTACTGCCGAAATTAATA
ATAACAACTCTTGTATCTCGGACTTTTCTTAATTCGTGTAACTGGTTAAT
CATTTTTTCATACTCATTATNACTGCCGAAATTGATAATAACAACTCTTG
TATCTCGGACTTTTCTTAATTCGTGTAACTGGTTAATCATTTTTTCATAC
TCATTATTTGGCTGTGTTAGATCAGTCAtaataatgatgacgtcataatt
ggtAGGGTTAGGAAGCCCTCGATTTGAAGATGCATAGAGGATAGGTGACA
GCAAATCACTTCCAAAAGTATTGGGTTGctttttgttgaaattattgaaa
ttttgaaacggCTCCTCTGGTGGTGTTCGTCGACTCTTAGAATGTTTCAA
GATTGCCTGTTAAAAAAGAATCAATAGacgataaaaaataa Run BLAST on NCBI transcript from alignment at scaffold_466:178545..179497- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067218 ID=TCONS_00067218|Name=TCONS_00067218|organism=Clytia hemisphaerica|type=transcript|length=953bp|location=Sequence derived from alignment at scaffold_466:178545..179497- (Clytia hemisphaerica)
ATTTCTTTGAATATTCAGGGATAAAATTCCCAAACCCCGGCAGCTAGGTC
AGCCATAGGCTGCCAACACCCCTCTATTATCAATCCTCCTAATTTGTTTG
GACAAAAAGCGATTCAAATATAAAACGAAAATCTCAATTTCACGAGCAAC
AATCTCAATCGATTTGGCAGGATCTATTTTTCCGCGAAAAACTCGCGAAA
ACGGGAAGTTTATTATCCGCTAAAATTAATCCAATAACAGTAGTCCGTGT
ATCAATGTCCGTGCTAGTTAGTATGATATAATATCAATGTCGATCATAAC
TGACGTCCATTTGAGGCCCTTCATGATGTTCAACAGCTCGACAACAGAAA
CAATGCNATAACTGACGTCCATCTGAGGCCCTTCATGATGTTCAACAGCT
CGACAACAGAAACAATGCTTCGGTGTGTCTGCTGTTAAGAACTCGTACAC
ATCTACTATCAAGCTGCTTTTGAATGCTGGAAGACGTTTCACCCAACGTA
CCTTTTCATGAAATTCTGTCGTGTTACGCTGTTGAATTTCTTCTCTACTG
CCGAAATTAATAATAACAACTCTTGTATCTCGGACTTTTCTTAATTCGTG
TAACTGGTTAATCATTTTTTCATACTCATTATNACTGCCGAAATTGATAA
TAACAACTCTTGTATCTCGGACTTTTCTTAATTCGTGTAACTGGTTAATC
ATTTTTTCATACTCATTATTTGGCTGTGTTAGATCAGTCATAATAATGAT
GACGTCATAATTGGTAGGGTTAGGAAGCCCTCGATTTGAAGATGCATAGA
GGATAGGTGACAGCAAATCACTTCCAAAAGTATTGGGTTGCTTTTTGTTG
AAATTATTGAAATTTTGAAACGGCTCCTCTGGTGGTGTTCGTCGACTCTT
AGAATGTTTCAAGATTGCCTGTTAAAAAAGAATCAATAGACGATAAAAAA
TAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067218-exon-scaffold_466-1575043694:179183..179497 | TCONS_00067218-exon-scaffold_466-1575043694:179183..179497 | Clytia hemisphaerica | exon |
| TCONS_00067218-exon-scaffold_466-1575043694:178545..179120 | TCONS_00067218-exon-scaffold_466-1575043694:178545..179120 | Clytia hemisphaerica | exon |
| TCONS_00067218-exon-scaffold_466-1510915933:179183..179497 | TCONS_00067218-exon-scaffold_466-1510915933:179183..179497 | Clytia hemisphaerica | exon |
| TCONS_00067218-exon-scaffold_466-1510915933:178545..179120 | TCONS_00067218-exon-scaffold_466-1510915933:178545..179120 | Clytia hemisphaerica | exon |
| TCONS_00067218-exon-scaffold_466-1491911889:179183..179497 | TCONS_00067218-exon-scaffold_466-1491911889:179183..179497 | Clytia hemisphaerica | exon |
| TCONS_00067218-exon-scaffold_466-1491911889:178545..179120 | TCONS_00067218-exon-scaffold_466-1491911889:178545..179120 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:178545..179497 - |
Blast
The following BLAST results are available for this feature:
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