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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067206 ID=TCONS_00067206|Name=TCONS_00067206|organism=Clytia hemisphaerica|type=transcript|length=1142bp
ATCGAGTTATTTTTATTTCCCTTTGAGCCTATAATTGTTCTATTTTCAAG
GTAAAATTGCGATATTTTAGGGTTTAACTTAAAGAATAAAATAATCCAGG
AAGAAAGTGATATCTTTATGGTTTCCCGTTTGAAAATATATCCGAGAGAA
AAAGGTTAACAATCTACAGTATACAATGTTTTGGGTATCCAAGctaaagg
aaaaggaaaacattCTAAGGAAATGATATTCTAAGAATTTGGAATATAAA
ATCTCGTTTCAAGCACATAACATCTGAATTCGAATACGGTGTTTAGCCAT
ACCCCGTGTCATAGACCCGGTGTGACCTCCACTAAACTGGAAATTCTGAC
CGAAATTTTGTTCCCTGTTAGAAAAAAAAGACACTAACATAATCAACCCC
CACTGGGAAAATGACTTCGATGTGCaacgaaaaaaaatatactCGAAAAC
CATTTGCATTGGATTTTTGGAGCTggtaacaaaataatttttatccaCAT
TTGGATTTCGATATACATTGTCATCCTCAGCGTGGCAGAAAGTTTTAccg
ggcactgagacaggggtgtattagcCTGAATATCGATCAAATTGAGACTC
TTTTTCCGTTACATCGGTTCAATATCTGGTTCTGGTTACCATCAGTAACA
ATAAAATAAGAATCAATCTATTCTTTATCTGCTCTTTCTGAAAGTACTTT
TCATCAAGGTATATGGTATTGGAGTTATCTTCGCAAGATTAATTTCCGAC
ATTATTGCAACTTGACTGAGTGTTTCTTCCAAGAGATTTTGTTCGAATTC
ACTGAAGATTGATACCAAAGCATGGTCTATGATGCTCGCATCAACCTTAT
TACCCTTCAAGAGTTTCCAAAGACATTTTCTGGCAATTAAGATTTGAATT
CGTCGATTGAGCTTCGAAAATTCCACACACAtttgtagaaccggaaatgg
ctcagaaatttgattggtcagtccCTCTTCCAGTTTATTAAAACCCATCT
TCTCTGATATCACAAGGTACTCGAGTAAGGATTTGCTTTTTGACGTTGAA
ATGGTCGAAATGTACGATTTAACCTTATCTGTCAGCCAATCGATTTGATA
TTCTTGGCAGAGTGGTGACAAAATGAGCATGTCTTTTTCATC Run BLAST on NCBI transcript from alignment at scaffold_466:444768..445974+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067206 ID=TCONS_00067206|Name=TCONS_00067206|organism=Clytia hemisphaerica|type=transcript|length=1207bp|location=Sequence derived from alignment at scaffold_466:444768..445974+ (Clytia hemisphaerica)
ATCGAGTTATTTTTATTTCCCTTTGAGCCTATAATTGTTCTATTTTCAAG
GTAAAATTGCGATATTTTAGGGTTTAACTTAAAGAATAAAATAATCCAGG
AAGAAAGTGATATCTTTATGGTTTCCCGTTTGAAAATATATCCGAGAGAA
AAAGGTTAACAATCTACAGTATACAATGTTTTGGGTATCCAAGctaaagg
aaaaggaaaacattCTAAGGAAATGATATTCTAAGAATTTGGAATATAAA
ATCTCGTTTCAAGCACATAACATCTGAATTCGAATACGGTGTTTAGCCAT
ACCCCGTGTCATAGACCCGGTGTGACCTCCACTAAACTGGAAATTCTGAC
CGAAATTTTGTTCCCTGTTAGAAAAAAAAGACACTAACATAATCAACCCC
CACTGGGAAAATGACTTCGATGTGCaacgaaaaaaaatatactCGAAAAC
CATTTGCATTGGATTTTTGGAGCTggtaacaaaataatttttatccaCAT
TTGGATTTCGATATACATTGTCATCCTCAGCGTGGCAGAAAGTTTTAccg
ggcactgagacaggggtgtattagcCTGAATATCGATCAAATTGAGACTC
TTTTTCCGTTACATCGGTTCAATATCTGGTTCTGGTTACCATCAGTAACA
ATAAAATAAGAATCAATCTATTCTTTATCTGCTCTTTCTGAAAGTACTTT
TCATCAAGGTATATGGTATTGGAGTTATCTTCGCAAGATTAATTTCCGAC
ATTATTGCAACTTGACTGAGTGTTTCTTCCAAGAGATTTTGTTCGAATTC
ACTGAAGATTGATACCAAAGCATGGTCTATGATGCTCGCATCAACCTTAT
TACCCTTCAAGAGTTTCCAAAGACATTTTCTGGCAATTAAGATTTGAATT
CGTCGATTGAGCTTCGAAAATTCCACACACAtttgtagaaccggaaatgg
ctcagaaatttgattggtcagtccCTCTTCCAGTTTATTAAAACCCATCT
TCTCTGATATCACAAGGTACTCGAGTAAGGATTTGCTTTTTGACGTTGAA
ATGGTCNCCCCATCTTCTCTGATATCACAAGGTACTCGAGTAAGGATTTG
CTTTTTGACGTTGAAATGGTCGAAATGTACGATTTAACCTTATCTGTCAG
CCAATCGATTTGATATTCTTGGCAGAGTGGTGACAAAATGAGCATGTCTT
TTTCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067206-exon-scaffold_466-1491911889:444768..445783 | TCONS_00067206-exon-scaffold_466-1491911889:444768..445783 | Clytia hemisphaerica | exon |
| TCONS_00067206-exon-scaffold_466-1510915933:444768..445783 | TCONS_00067206-exon-scaffold_466-1510915933:444768..445783 | Clytia hemisphaerica | exon |
| TCONS_00067206-exon-scaffold_466-1575043694:444768..445783 | TCONS_00067206-exon-scaffold_466-1575043694:444768..445783 | Clytia hemisphaerica | exon |
| TCONS_00067206-exon-scaffold_466-1491911889:445849..445974 | TCONS_00067206-exon-scaffold_466-1491911889:445849..445974 | Clytia hemisphaerica | exon |
| TCONS_00067206-exon-scaffold_466-1510915933:445849..445974 | TCONS_00067206-exon-scaffold_466-1510915933:445849..445974 | Clytia hemisphaerica | exon |
| TCONS_00067206-exon-scaffold_466-1575043694:445849..445974 | TCONS_00067206-exon-scaffold_466-1575043694:445849..445974 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:444768..445974 + |
Blast
The following BLAST results are available for this feature:
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