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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067194 ID=TCONS_00067194|Name=TCONS_00067194|organism=Clytia hemisphaerica|type=transcript|length=1186bp
CAACAACTGTGACCACACCAAATATGACTGAGACATCAACAAAACCCAAC
AAAGCGCCAGAACAGTCAACACCCTCAAAAGCAACAACCACAACGCCAAC
TGCTGAGACATCAACCAAACACAACGAAGGACCAGAACAGTCAACACCCT
CAAAAGCAACAACCACACCACCTACTGCTGAGATATCAACCAAACACAAC
GAAGGACCAGAACAGTCAACACCCTCAAAAGCAACAACCACAACGCCAAC
TGCTGAGACATCAACAAAACACAAGAAAGAACCGAAACAATCAACAACCA
CAACAACTGCAACGCAATCTACTACCAAAACAACAACATCTTCCCCAAGT
TTTGAAATAGATTGTCAATTCCAAGATGGTTCATCTTTCAAATCTGGTGA
TATCATATCTCAACATTATCATCCTGTTACCAAAAAACTATGCTTCAAAG
TTTATTGTGGTAACTTGGGCTCTATCAAATCCCAAAACTTCGATTGTGAA
GATGAGAAAATAACAGAAACGACCCCAACAACGACCACCAAAGGTTCGGA
TGTCCAAGGCTCTGGCAAGAGAGGATCATCTTCATCAAAAACAACTGAAA
ATCCTTTACGTAGGAAACATACTGCATCAATCACATTCAATATTTTGTTA
GCCCTCCTGATTATCATCCTACTTGTTGCTTTCATATCAACTTATCGTAA
ATATAAAAAGACATTTCATTTGAATGCTTTTCACACTAAACGGGACACAG
ATATTCAGCTTGAAAGTGCTTACTCAAATTCGATGGACGATTTATGATAA
AGTGACCTATCTCCTACTACAATTCTCGACACATGTGCAGGTTGAAGCTT
TGGGATCCAAATTTTAGGATGACTTagaatgaaattttctaatcattaaa
agttttttttgacttttcttttCTAATTTCTGATTTTCTATTTCATGATT
TTATCAAGATCTTAAAGTTTTTGCGACTTAGTTTTAGTTATCTTAACTTG
AGTCATCTTTGCTGGTATTTTAGCGATCAAGAATTGTTAAAGCAAAGAAT
ATTTACAATATTTAAATTCtaaatataattttataaattattatcaaaat
gaaattttttatataaacttACTTTATTGAGcttcattttaaatattatt
aGTTCCTACTAAAACACAATAAAgcttaatttaaaa Run BLAST on NCBI transcript from alignment at scaffold_466:269920..271339+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067194 ID=TCONS_00067194|Name=TCONS_00067194|organism=Clytia hemisphaerica|type=transcript|length=1420bp|location=Sequence derived from alignment at scaffold_466:269920..271339+ (Clytia hemisphaerica)
CAACAACTGTGACCACACCAAATATGACTGAGACATCAACAAAACCCAAC
AAAGCGCCAGAACAGTCAACACCCTCAAAAGCAACAACCACAACGCCAAC
TGCTGAGACATCAACCAAACACAACGAAGGACCAGAACAGTCAACACCCT
CAAAAGCAACAACCACACCACCTACTGCTGAGATATCAACCAAACACAAC
GAAGGACCAGAACAGTCAACACCCTCAAAAGCAACAACCACAACGCCAAC
TGCTGAGACATCAACAAAACACAACGAAGGACCAGAACAGTCAACACCCT
CAAAAGCAACAACCACAACGCCAACTGCTGAGACATCAACAAAACACAAC
GAAGGACCAGAACAGTCAACAACAGCTACAACCACGCCACCTTCAGCTGA
ACAAACAACAAAACACAAGAAAGAAACAGAACAACTAACATCTACAAAAG
CAGCAACCACAGCAACGACAACCACAACGCCAACTGCTGAGACATCAACA
AAACACAAGAAAGAACCGAAACAATCAACAACCACAACAACTGCAACGCA
ATCTACTACCAAAACAACAACATCTTCCCCAAGTTTTGAAATAGATTGTC
AATTCCAAGATGGTTCATCTTTCAAATCTGGTGATATCATATCTCAACAT
TATCATCCTGTTACCAAAAAACTATGCTTCAAAGTTTATTGTGGTAACTT
GGGCTCTATCAAATCCCAAAACTTCGATTGTGAAGATGAGAAAATAACAG
AAACGACCCCAACAACGACCACCAAAGGTTCGGATGTCCAAGGCTCTGGC
AAGAGAGGATCATCTTCATCAAAAACAACTGAAAATCCTTTACGTAGGAA
ACATACTGCATCAATCACATTCAATATTTTGTTAGCCCTCCTGATTATCA
TCCTACTTGTTGCTTTCATATCAACTTATCGTAAATATAAAAAGACATTT
CATTTGAATGCTTTTCACACTAAACGGGACACAGATATTCAGCTTGAAAG
TGCTTACTCAAATTCGATGGACGATTTATGATAAAGTGACCTATCTCCTA
CTACAATTCTCGACACATGTGCAGGTTGAAGCTTTGGGATCCAAATTTTA
GGATGACTTagaatgaaattttctaatcattaaaagttttttttgacttt
tcttttCTAATTTCTGATTTTCTATTTCATGATTTTATCAAGATCTTAAA
GTTTTTGCGACTTAGTTTTAGTTATCTTAACTTGAGTCATCTTTGCTGGT
ATTTTAGCGATCAAGAATTGTTAAAGCAAAGAATATTTACAATATTTAAA
TTCtaaatataattttataaattattatcaaaatgaaattttttatataa
acttACTTTATTGAGcttcattttaaatattattaGTTCCTACTAAAACA
CAATAAAgcttaatttaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067194-exon-scaffold_466-1491911889:269920..270178 | TCONS_00067194-exon-scaffold_466-1491911889:269920..270178 | Clytia hemisphaerica | exon |
| TCONS_00067194-exon-scaffold_466-1510915933:269920..270178 | TCONS_00067194-exon-scaffold_466-1510915933:269920..270178 | Clytia hemisphaerica | exon |
| TCONS_00067194-exon-scaffold_466-1575043694:269920..270178 | TCONS_00067194-exon-scaffold_466-1575043694:269920..270178 | Clytia hemisphaerica | exon |
| TCONS_00067194-exon-scaffold_466-1491911889:270413..271339 | TCONS_00067194-exon-scaffold_466-1491911889:270413..271339 | Clytia hemisphaerica | exon |
| TCONS_00067194-exon-scaffold_466-1510915933:270413..271339 | TCONS_00067194-exon-scaffold_466-1510915933:270413..271339 | Clytia hemisphaerica | exon |
| TCONS_00067194-exon-scaffold_466-1575043694:270413..271339 | TCONS_00067194-exon-scaffold_466-1575043694:270413..271339 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:269920..271339 + |
Blast
The following BLAST results are available for this feature:
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